Equivalence class NR_20.0_19551.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6GAZ|1|AA (rep) | Small subunit ribosomal RNA | 12S ribosomal RNA, mitochondrial | Sus scrofa | Mitochondria | RF00177 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit. | Electron microscopy | 3.1 | 2018-08-08 |
| 2 | 6GAW|1|AA | Small subunit ribosomal RNA | 12S ribosomal RNA, mitochondrial | Sus scrofa | Mitochondria | RF00177 | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | Electron microscopy | 3.2 | 2018-08-22 |
| 3 | 7NQL|1|AA | Small subunit ribosomal RNA | 12S rRNA | Sus scrofa | Mitochondria | RF00177 | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | Electron microscopy | 3.4 | 2021-05-05 |
| 4 | 7NQH|1|AA | Small subunit ribosomal RNA | 12S rRNA | Sus scrofa | Mitochondria | RF00177 | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | Electron microscopy | 3.5 | 2021-05-05 |
| 5 | 5AJ3|1|A | Small subunit ribosomal RNA | MITORIBOSOMAL 12S RRNA | Sus scrofa | Mitochondria | RF00177 | Structure of the small subunit of the mammalian mitoribosome | Electron microscopy | 3.6 | 2015-04-22 |
| 6 | 5AJ4|1|AA | Small subunit ribosomal RNA | MITORIBOSOMAL 12S Ribosomal RNA | Sus scrofa | Mitochondria | RF00177 | Structure of the 55S mammalian mitoribosome. | Electron microscopy | 3.8 | 2015-04-22 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7NQH|1|AA | 55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet | ELECTRON MICROSCOPY | 3.5 | 960 |
| 2 | 7NQL|1|AA | 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet | ELECTRON MICROSCOPY | 3.4 | 960 |
| 3 | 6GAW|1|AA | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome. | ELECTRON MICROSCOPY | 3.2 | 960 |
| 4 | 6GAZ|1|AA | Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit. | ELECTRON MICROSCOPY | 3.1 | 960 |
| 5 | 5AJ3|1|A | Structure of the small subunit of the mammalian mitoribosome | ELECTRON MICROSCOPY | 3.6 | 960 |
| 6 | 5AJ4|1|AA | Structure of the 55S mammalian mitoribosome. | ELECTRON MICROSCOPY | 3.8 | 960 |