#IFECompound(s)RNA source organismTitleMethodResolutionDate
14YCO|1|D (rep)tRNApheEscherichia coliE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.12015-04-22
22ZXU|1|CtRNA(Phe)Escherichia coliCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.752009-05-26
32ZM5|1|CtRNA(Phe)Escherichia coliCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.552009-04-14
44YCO|1|EtRNApheEscherichia coliE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.12015-04-22
53FOZ|1|CtRNA(Phe)Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-RAY DIFFRACTION2.52009-01-20
63L0U|1|AUnmodified tRNAPheThe crystal structure of unmodified tRNAPhe from Escherichia coliX-RAY DIFFRACTION32010-03-16
74YCO|1|FtRNApheEscherichia coliE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.12015-04-22
84V5E|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.452014-07-09
94V9D|1|BVphenylalanine specific transfer RNA, messenger RNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
103FOZ|1|DtRNA(Phe)Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-RAY DIFFRACTION2.52009-01-20
114V5D|1|AVP AND A-SITE PHE-TRNA PHE, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.52014-07-09
124V5D|1|CVP AND A-SITE PHE-TRNA PHE, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.52014-07-09
134V9C|1|AVPhenylalanine specific transfer RNA, tRNA-Phe, Messenger RNA, mRNAEscherichia coliAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32014-07-09
144V5Q|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
154V5S|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
164V5L|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.12014-07-09
174V5P|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
184V5P|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
194Z3S|1|2wA/E-site tRNAs, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
202ZM5|1|DtRNA(Phe)Escherichia coliCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.552009-04-14
214V6F|1|CCTRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37, MRNAEscherichia coliElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.12014-07-09
224V5J|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.12014-07-09
234W2F|1|AWA/P-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
245AFI|1|yA/T-site Phe-tRNAPhe, mRNAEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
254V5R|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
264V5E|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.452014-07-09
274V5Q|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
284V5R|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
294V6L|1|AEA/T-site tRNA PheEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22014-07-09
302ZXU|1|DtRNA(Phe)Escherichia coliCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.752009-05-26
314V6F|1|BCTRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37, MRNAEscherichia coliElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.12014-07-09
324Z3S|1|1wA/E-site tRNAs, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
334Y4P|1|1wA-site and E-site tRNAs, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
344V5S|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
354W2E|1|wP-site tRNA, mRNAEscherichia coliCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92014-10-01
364V9H|1|AVPE hybrid state tRNA Phe, mRNAEscherichia coliCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.862014-07-09
371VY5|1|AWA-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
384V6K|1|BBA/T-site tRNA Phe, mRNAEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252014-07-09
394V6K|1|BEA/T-site tRNA Phe, mRNAEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252014-07-09
404WQU|1|BWP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
414WQF|1|BWP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
424WQU|1|DWP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
434WQF|1|DWP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
444V5J|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.12014-07-09
454Z3S|1|1yA/E-site tRNAsEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
464W2I|1|AWA/P-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
471VY4|1|AYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
484W2E|1|xE-site tRNAEscherichia coliCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92014-10-01
494Y4P|1|2yA-site and E-site tRNAsEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
504V69|1|AWP-site tRNA fMet (Unmodified bases except for Thymine 54)Escherichia coliTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72014-07-09
514V7D|1|BWtRNA, mRNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62014-07-09
524P6F|1|XWE-Site tRNA-Phe or A-Site tRNA-PheEscherichia coliCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.62014-10-01
534W2G|1|AWA/P-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
541VY5|1|CWA-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
554WPO|1|DWA-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
564Y4P|1|2wA-site and E-site tRNAs, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
574V6F|1|CBTRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37, MRNAEscherichia coliElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.12014-07-09
581VY4|1|AWA-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
594V4Y|1|ABtRNA PHE (unmodified bases), mRNAEscherichia coliCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.52014-07-09
604V9D|1|AVphenylalanine specific transfer RNA, messenger RNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
614V7C|1|AWtRNA, mRNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62014-07-09
624W2G|1|AYA/P-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
634W2F|1|AYA/P-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
644WQU|1|BYP-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
654WPO|1|BYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
664WQF|1|BYP-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
674V4I|1|zP-site PHE-tRNA, MRNAEscherichia coliCrystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-RAY DIFFRACTION3.712014-07-09
681VY4|1|CWA-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
694W2G|1|CWA/P-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
704V6F|1|BBTRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37, MRNAEscherichia coliElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.12014-07-09
714V6F|1|BDTRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37, MRNAEscherichia coliElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.12014-07-09
724V6F|1|CDTRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37, MRNAEscherichia coliElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.12014-07-09
733J46|1|aA-tRNAEscherichia coliStructure of the SecY protein translocation channel in actionELECTRON MICROSCOPY10.12013-10-23
744Z3S|1|2yA/E-site tRNAsEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
754W2F|1|CYA/P-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
761VY4|1|CYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
774W2G|1|CYA/P-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
784V5G|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.62014-07-09
794V51|1|AWE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
804V5G|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.62014-07-09
814Y4P|1|1yA-site and E-site tRNAsEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
824W2I|1|AYA/P-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
831VY5|1|AYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
844W2I|1|CWA/P-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
854V4Y|1|ADtRNA PHE (unmodified bases), mRNAEscherichia coliCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.52014-07-09
864V9I|1|AWE-SITE tRNAEscherichia coliCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
874V5D|1|AWE-SITE TRNA PHEEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.52014-07-09
884V5C|1|CWE-SITE TRNA PHEEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
894P6F|1|QWE-Site tRNA-Phe or A-Site tRNA-PheEscherichia coliCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.62014-10-01
904V6L|1|ABA/T-site tRNA Phe, mRNAEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22014-07-09
914WPO|1|BWA-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
924W2I|1|CYA/P-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
934WQU|1|DYP-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
944WPO|1|DYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
954WQF|1|DYP-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
964W2F|1|CWA/P-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
974V4Y|1|ACtRNA PHE (unmodified bases), mRNAEscherichia coliCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.52014-07-09
984V97|1|AWE-SITE TRNA PHE OR A-SITE tRNA PheEscherichia coliCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.522014-07-09
994V5D|1|CWE-SITE TRNA PHEEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.52014-07-09
1004V51|1|CWE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
1011VY5|1|CYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
1024WT1|1|3LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1034V8J|1|AWtRNA-PheEscherichia coliCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.92014-07-09
1044V5C|1|AWE-SITE TRNA PHEEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
1054WSD|1|3LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
1064V5Q|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
1074V5E|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.452014-07-09
1084WSD|1|1LtRNA-Phe, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
1094WSD|1|3KtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
1104WT1|1|1KtRNA-Phe, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1114WT1|1|1LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1124V7C|1|AVtRNA, mRNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62014-07-09
1134V5P|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
1144V5R|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
1154V8J|1|CWtRNA-PheEscherichia coliCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.92014-07-09
1164V5P|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
1174V97|1|CWE-SITE TRNA PHE OR A-SITE tRNA PheEscherichia coliCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.522014-07-09
1184V9I|1|CWE-SITE tRNAEscherichia coliCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
1194WRO|1|1LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1204V5D|1|AYP AND A-SITE PHE-TRNA PHE, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.52014-07-09
1214V5J|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.12014-07-09
1224V5D|1|CYP AND A-SITE PHE-TRNA PHE, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.52014-07-09
1234V5L|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.12014-07-09
1244V9C|1|CVPhenylalanine specific transfer RNA, tRNA-Phe, Messenger RNA, mRNAEscherichia coliAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32014-07-09
1254WQR|1|3KtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
1264WQR|1|3LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
1274V5S|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
1284V7D|1|BVtRNA, mRNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62014-07-09
1294V5R|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
1304WQR|1|1KtRNA-Phe, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
1314V5C|1|CYA-SITE PHE-TRNA PHE, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
1324WSD|1|1KtRNA-Phe, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
1334V5G|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.62014-07-09
1344V5G|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.62014-07-09
1354WRO|1|1KtRNA-Phe, RNA (30-MER)Escherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1364WRO|1|3KtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1374WRO|1|3LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1384V5J|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.12014-07-09
1394WZO|1|3KtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1404V5Q|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
1414WQR|1|1LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
1424WZO|1|3LtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1434W2H|1|AYE-site tRNA Acceptor StemEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
1444WT1|1|3KtRNA-PheEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1454V5E|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.452014-07-09
1464V5C|1|AYA-SITE PHE-TRNA PHE, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
1474V5S|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
1481VY7|1|AYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
1491VY7|1|CYE-site tRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
1504W2H|1|CYE-site tRNA Acceptor StemEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15

Release history

Release2.272.282.292.302.312.322.332.34
Date2015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-31

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11VY7|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.85
21VY7|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.85
34W2H|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.75
44V5L|1|AWThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.176
54V5S|1|AWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
64V5Q|1|AWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
74V5P|1|AWThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
84V5P|1|CWThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
94V5R|1|AWThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
104V5R|1|CWThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
114V5G|1|AWThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
124V5G|1|CWThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
134V5S|1|CWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
144V5Q|1|CWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
154V69|1|AWTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.776
164V5J|1|AWStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
174V5J|1|CWStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
184V5E|1|AWInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
194V9I|1|CWCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.376
204V9I|1|AWCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.376
214V5E|1|CWInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
224V8J|1|CWCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.976
234V97|1|CWCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5276
244P6F|1|XWCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.676
254V51|1|CWStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
264V51|1|AWStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
274V5C|1|CWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
284V5D|1|AWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
294V5D|1|CWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
304V5C|1|AWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
314V8J|1|AWCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.976
324V97|1|AWCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5276
334P6F|1|QWCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.676
344WPO|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.866
354WQF|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.866
364WQU|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.866
371VY4|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.666
381VY5|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5566
394W2I|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.766
404W2G|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5566
414W2F|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.466
424Y4P|1|2yCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.566
434Z3S|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6566
444Z3S|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6567
454Y4P|1|1yCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.567
464W2F|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.467
474W2G|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5567
484W2I|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.767
491VY5|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5567
504WPO|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.867
514WQU|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.867
524WQF|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.867
534W2E|1|xCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.967
541VY4|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.667
554W2H|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.718
563FOZ|1|CStructure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-RAY DIFFRACTION2.574
572ZM5|1|CCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.5574
582ZXU|1|CCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.7574
592ZXU|1|DCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.7569
602ZM5|1|DCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.5569
614V9C|1|CVAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.376
623L0U|1|AThe crystal structure of unmodified tRNAPhe from Escherichia coliX-RAY DIFFRACTION373
634V6F|1|CDElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
644WSD|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
654WQR|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
664WT1|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
674WRO|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0568
684WZO|1|3KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.370
694WZO|1|3LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.370
704WRO|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0568
714WQR|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
724WT1|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
734WSD|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9571
744V6F|1|BDElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
754V4Y|1|ADCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.576
764V9H|1|AVCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.8674
774V7C|1|AWStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.676
784V9D|1|AVStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION376
794V7D|1|BWStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.676
804V7C|1|AVStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.676
814V7D|1|BVStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.676
824Z3S|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6566
834Z3S|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6567
844W2I|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.767
854Y4P|1|1wCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.567
864W2F|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.467
874W2G|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5567
881VY5|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5566
891VY4|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.666
904WPO|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.866
914WPO|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.864
921VY4|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.664
934W2F|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.465
944W2G|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5565
951VY5|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5564
964W2I|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.765
974Y4P|1|2wCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.565
984V5D|1|CYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
994V5C|1|AYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.375
1004V5C|1|CYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.375
1014V5D|1|AYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
1024WRO|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0567
1034WSD|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9570
1044WT1|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0569
1054WQR|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1573
1064WQR|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1573
1074WRO|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0568
1084WSD|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
1094WT1|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1103J46|1|aStructure of the SecY protein translocation channel in actionELECTRON MICROSCOPY10.175
1114V6F|1|BBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1124V6F|1|CBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1134V4Y|1|ABCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.576
1144V4Y|1|ACCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.576
1154V5G|1|AVThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
1164V5G|1|CVThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.676
1174V5D|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
1184V5J|1|CVStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
1194V5E|1|AVInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
1204V5D|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
1214V5E|1|CVInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
1224V5J|1|AVStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
1234V5Q|1|AVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1244V5P|1|AVThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1254V5P|1|CVThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1264V5R|1|CVThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1274V5R|1|AVThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1284V5S|1|AVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1294V5L|1|AVThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.176
1304V5S|1|CVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
1314V5Q|1|CVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
1324W2E|1|wCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.968
1334V9D|1|BVStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION376
1344V9C|1|AVAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.376
1354V6F|1|CCElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1364V6F|1|BCElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1374WQF|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.869
1384WQU|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.869
1394V4I|1|zCrystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-RAY DIFFRACTION3.7167
1404WQF|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.869
1414WQU|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.869
1424V6K|1|BEStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.2566
1434V6L|1|AEStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.266
1444YCO|1|FE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.171
1454YCO|1|DE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.174
1464YCO|1|EE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.167
1475AFI|1|y2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.967
1484V6K|1|BBStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.2566
1494V6L|1|ABStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.266
1503FOZ|1|DStructure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-RAY DIFFRACTION2.569