#IFECompound(s)RNA source organismTitleMethodResolutionDate
11A34|1|B+ 1A34|1|C (rep)RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEXX-RAY DIFFRACTION1.811998-04-29
24OQ8|1|B+ 4OQ8|1|CRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.452014-09-10
34IJS|1|ERNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Crystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.22013-04-24
44OQ9|1|P+ 4OQ9|1|eRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
54NIA|1|P+ 4NIA|1|eRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
64NIA|1|QRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
74OQ9|1|QRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
84NIA|1|R+ 4NIA|1|gRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
94OQ9|1|R+ 4OQ9|1|gRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
104NIA|1|S+ 4NIA|1|hRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
114OQ9|1|S+ 4OQ9|1|hRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
124OQ9|1|T+ 4OQ9|1|iRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
134NIA|1|T+ 4NIA|1|iRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
144NIA|1|URNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
154OQ9|1|URNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
164NIA|1|VRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
174OQ9|1|VRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
184NIA|1|WRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
194OQ9|1|WRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
204NIA|1|X+ 4NIA|1|mRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
214OQ9|1|X+ 4OQ9|1|mRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
224NIA|1|Y+ 4NIA|1|nRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
234OQ9|1|Y+ 4OQ9|1|nRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
244OQ9|1|ZRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
254NIA|1|ZRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
264OQ9|1|aRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
274NIA|1|aRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
284OQ9|1|bRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
294NIA|1|bRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
304OQ9|1|cRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
314NIA|1|cRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
324OQ9|1|dRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.452014-09-10
334NIA|1|dRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Tobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.822014-09-10
344IJS|1|FRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Crystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.22013-04-24
354IJS|1|GRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Crystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.22013-04-24
364IJS|1|HRNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')Crystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.22013-04-24
372PO1|1|C10-mer poly(A)Crystal structure of the P. abyssi exosome RNase PH ring complexed with a single stranded 10-mer poly(A) RNAX-RAY DIFFRACTION1.942008-03-18

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.45
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14OQ8|1|B+4OQ8|1|CSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-RAY DIFFRACTION1.4510
24NIA|1|P+4NIA|1|eSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
34NIA|1|T+4NIA|1|iSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
44NIA|1|WSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
54NIA|1|cSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
64NIA|1|QSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
74NIA|1|ZSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
84NIA|1|R+4NIA|1|gSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
94NIA|1|USatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
104NIA|1|S+4NIA|1|hSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
114NIA|1|aSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
124NIA|1|Y+4NIA|1|nSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
134NIA|1|VSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
144OQ9|1|T+4OQ9|1|iSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
154OQ9|1|S+4OQ9|1|hSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
164OQ9|1|P+4OQ9|1|eSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
174OQ9|1|X+4OQ9|1|mSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
184OQ9|1|aSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
194OQ9|1|R+4OQ9|1|gSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
204OQ9|1|Y+4OQ9|1|nSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
214OQ9|1|VSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
224OQ9|1|QSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
234OQ9|1|WSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
244OQ9|1|cSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
254OQ9|1|USatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
264OQ9|1|ZSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
274OQ9|1|bSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
284OQ9|1|dSatellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-RAY DIFFRACTION1.4510
294NIA|1|bSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
304NIA|1|dSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
314NIA|1|X+4NIA|1|mSatellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-RAY DIFFRACTION1.8210
321A34|1|B+1A34|1|CSATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEXX-RAY DIFFRACTION1.8111
334IJS|1|HCrystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.29
344IJS|1|GCrystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.29
354IJS|1|ECrystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.210
364IJS|1|FCrystal structure of nucleocapsid protein encoded by the prototypic member of orthobunyavirusX-RAY DIFFRACTION3.29
372PO1|1|CCrystal structure of the P. abyssi exosome RNase PH ring complexed with a single stranded 10-mer poly(A) RNAX-RAY DIFFRACTION1.947