#IFECompound(s)RNA source organismTitleMethodResolutionDate
11I5L|1|Y (rep)5'-R(*UP*UP*U)-3'CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNAX-RAY DIFFRACTION2.752001-08-28
21MVR|1|1mRNA, triplet codon (A-site)Escherichia coliDecoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S RibosomeELECTRON MICROSCOPY12.82003-04-01
35MQ0|1|33'-EXON OF UBC4 PRE-MRNA, BOUND BY PRP22 HELICASESaccharomyces cerevisiaeStructure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY4.172017-01-18
44V68|1|A0MRNA CODONT. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.ELECTRON MICROSCOPY6.42014-07-09
51I5L|1|U5'-R(*UP*UP*U)-3'CRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNAX-RAY DIFFRACTION2.752001-08-28
64DR7|1|b5'-R(P*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin boundX-RAY DIFFRACTION3.752012-11-14
74DR6|1|b5'-R(*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position and streptomycin boundX-RAY DIFFRACTION3.32012-11-14

Release history

Release2.1112.1122.1132.1142.1152.1162.1172.1182.119
Date2017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_27949.3NR_20.0_27949.22.111(6) 1I5L|1|U, 4V68|1|A0, 4DR7|1|b, 4DR6|1|b, 1MVR|1|1, 1I5L|1|Y(1) 5MQ0|1|3(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_27949.3NR_20.0_27949.42.120(7) 1MVR|1|1, 1I5L|1|Y, 1I5L|1|U, 5MQ0|1|3, 4V68|1|A0, 4DR7|1|b, 4DR6|1|b(0) (2) 5IP2|1|D, 5IP2|1|F

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11I5L|1|YCRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNAX-RAY DIFFRACTION2.753
21I5L|1|UCRYSTAL STRUCTURE OF AN SM-LIKE PROTEIN (AF-SM1) FROM ARCHAEOGLOBUS FULGIDUS COMPLEXED WITH SHORT POLY-U RNAX-RAY DIFFRACTION2.753
34DR6|1|bCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position and streptomycin boundX-RAY DIFFRACTION3.32
44DR7|1|bCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position, and streptomycin boundX-RAY DIFFRACTION3.753
54V68|1|A0T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.ELECTRON MICROSCOPY6.43
65MQ0|1|3Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY4.173
71MVR|1|1Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S RibosomeELECTRON MICROSCOPY12.83