Equivalence class NR_20.0_29342.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6YSI|1|1 (rep) | Large subunit ribosomal RNA | 23S ribosomal RNA | Acinetobacter baumannii | Bacteria | RF02541 | Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit | Electron microscopy | 2.5 | 2020-09-16 |
| 2 | 6V3A|1|AN1 | Large subunit ribosomal RNA | 23s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF02541 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | Electron microscopy | 2.82 | 2020-02-05 |
| 3 | 6YHS|1|1 | Large subunit ribosomal RNA | 23S ribosomal RNA | Acinetobacter baumannii | Bacteria | RF02541 | Acinetobacter baumannii ribosome-amikacin complex - 50S subunit | Electron microscopy | 2.7 | 2020-09-16 |
| 4 | 6V3B|1|AN1 | Large subunit ribosomal RNA | 23s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF02541 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | Electron microscopy | 2.91 | 2020-02-05 |
| 5 | 6V3D|1|AN1 | Large subunit ribosomal RNA | 23s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF02541 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | Electron microscopy | 2.95 | 2020-02-05 |
| 6 | 6V39|1|AN1 | Large subunit ribosomal RNA | 23s ribosomal RNA | Acinetobacter baumannii | Bacteria | RF02541 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | Electron microscopy | 3.04 | 2020-02-05 |
Release history
| Release | 3.144 | 3.145 | 3.146 | 3.147 | 3.148 | 3.149 | 3.150 | 3.151 | 3.152 | 3.153 | 3.154 | 3.155 | 3.156 | 3.157 | 3.158 | 3.159 | 3.160 | 3.161 | 3.162 | 3.163 | 3.164 | 3.165 | 3.166 | 3.167 | 3.168 | 3.169 | 3.170 | 3.171 | 3.172 | 3.173 | 3.174 | 3.175 | 3.176 | 3.177 | 3.178 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-09-16 | 2020-09-23 | 2020-09-30 | 2020-10-07 | 2020-10-14 | 2020-10-21 | 2020-10-28 | 2020-11-04 | 2020-11-11 | 2020-11-18 | 2020-11-25 | 2020-12-02 | 2020-12-09 | 2020-12-16 | 2020-12-23 | 2020-12-30 | 2021-01-06 | 2021-01-13 | 2021-01-20 | 2021-01-27 | 2021-02-03 | 2021-02-10 | 2021-02-17 | 2021-02-24 | 2021-03-03 | 2021-03-10 | 2021-03-17 | 2021-03-24 | 2021-03-31 | 2021-04-07 | 2021-04-14 | 2021-04-21 | 2021-04-28 | 2021-05-05 | 2021-05-12 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_20.0_29342.2 | NR_20.0_29342.1 | 3.144 | (4) 6V3D|1|AN1, 6V3B|1|AN1, 6V3A|1|AN1, 6V39|1|AN1 | (2) 6YSI|1|1, 6YHS|1|1 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_29342.2 | NR_20.0_96169.1 | 3.179 | (6) 6V39|1|AN1, 6YHS|1|1, 6V3D|1|AN1, 6V3B|1|AN1, 6YSI|1|1, 6V3A|1|AN1 | (0) | (5) 7M4Z|1|A, 7M4V|1|A, 7M4Y|1|A, 7M4X|1|A, 7M4W|1|A |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6V39|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | ELECTRON MICROSCOPY | 3.04 | 2877 |
| 2 | 6V3D|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | ELECTRON MICROSCOPY | 2.95 | 2877 |
| 3 | 6V3B|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | ELECTRON MICROSCOPY | 2.91 | 2877 |
| 4 | 6V3A|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | ELECTRON MICROSCOPY | 2.82 | 2877 |
| 5 | 6YHS|1|1 | Acinetobacter baumannii ribosome-amikacin complex - 50S subunit | ELECTRON MICROSCOPY | 2.7 | 2672 |
| 6 | 6YSI|1|1 | Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit | ELECTRON MICROSCOPY | 2.5 | 2672 |