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Equivalence class NR_20.0_33592.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12TMV|1|R (rep)RNA (5'-R(P*GP*AP*A)-3')VISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTIONFiber diffraction2.91989-01-09
21RMV|1|BRIBGRASS MOSAIC VIRUS RNARibgrass mosaic virusRIBGRASS MOSAIC VIRUS, FIBER DIFFRACTIONFiber diffraction2.91997-05-15
31CGM|1|IRNA (5'-R(P*GP*AP*A)-3')STRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC VIRUS BY X-RAY FIBER DIFFRACTION. SIGNIFICANCE FOR THE EVOLUTION OF TOBAMOVIRUSESFiber diffraction3.41994-04-30
41VTM|1|RRNA (5'-R(P*GP*AP*A)-3')Tobacco mild green mosaic virusSTRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTIONFiber diffraction3.51994-07-31
54UDV|1|R5'-D(*GP*AP*AP)-3'Tobacco mosaic virusCryo-EM structure of TMV at 3.35 A resolutionElectron microscopy3.352014-12-31
62OM3|1|RTobacco Mosaic Virus RNAHigh-resolution cryo-EM structure of Tobacco Mosaic VirusElectron microscopy4.42007-10-16
73PDM|1|RRNA (5'-R(P*GP*AP*A)-3')Hibiscus Latent Singapore virusFiber diffraction3.52011-01-12
82XEA|1|R5'-(*GP*AP*AP)-3'Tobacco mosaic virus4.6 ANGSTROM CRYO-EM RECONSTRUCTION OF TOBACCO MOSAIC VIRUS FROM IMAGES RECORDED AT 300 KEV ON A 4KX4K CCD CAMERAElectron microscopy4.62010-06-30

Release history

Release2.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.38
Date2015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_33592.2NR_all_33592.12.4(7) 3PDM|1|R, 2XEA|1|R, 2TMV|1|R, 2OM3|1|R, 1VTM|1|R, 1RMV|1|B, 1CGM|1|I(1) 4UDV|1|R(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13PDM|1|RHibiscus Latent Singapore virusFIBER DIFFRACTION3.53
21RMV|1|BRIBGRASS MOSAIC VIRUS, FIBER DIFFRACTIONFIBER DIFFRACTION2.93
31VTM|1|RSTRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTIONFIBER DIFFRACTION3.53
41CGM|1|ISTRUCTURE DETERMINATION OF CUCUMBER GREEN MOTTLE MOSAIC VIRUS BY X-RAY FIBER DIFFRACTION. SIGNIFICANCE FOR THE EVOLUTION OF TOBAMOVIRUSESFIBER DIFFRACTION3.43
52TMV|1|RVISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTIONFIBER DIFFRACTION2.93
62XEA|1|R4.6 ANGSTROM CRYO-EM RECONSTRUCTION OF TOBACCO MOSAIC VIRUS FROM IMAGES RECORDED AT 300 KEV ON A 4KX4K CCD CAMERAELECTRON MICROSCOPY4.63
72OM3|1|RHigh-resolution cryo-EM structure of Tobacco Mosaic VirusELECTRON MICROSCOPY4.43
84UDV|1|RCryo-EM structure of TMV at 3.35 A resolutionELECTRON MICROSCOPY3.353
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