#IFECompound(s)RNA source organismTitleMethodResolutionDate
14TUD|1|QV (rep)P-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
24V9R|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
34V9S|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
44TUA|1|QVP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
54P70|1|XVP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.682014-08-13
64V7B|1|AVmodified formyl-methionine specific initiator transfer RNA, messenger RNAEscherichia coliVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82014-07-09
74V5F|1|AVE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
84V9S|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
94V9R|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
104V7M|1|AXtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.452014-07-09
114V67|1|AYP AND E-SITE TRNA(FMET), MRNAEscherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
124V63|1|AYP and E-site tRNA(fMet), mRNAEscherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
134V87|1|BCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
144V8F|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
154V9I|1|CVP-SITE tRNA, mRNAEscherichia coliCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
164V6A|1|CWtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
174V63|1|CYP and E-site tRNA(fMet), mRNAEscherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
184V67|1|CYP AND E-SITE TRNA(FMET), MRNAEscherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
194V8C|1|DCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
204TUB|1|QVP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
214TUB|1|XVP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
224TUD|1|XVP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
234V5F|1|CVE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
244Z3S|1|1xP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
254V8B|1|ACTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
264V67|1|AZP AND E-SITE TRNA(FMET)Escherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
274V63|1|AZP and E-site tRNA(fMet)Escherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
284V8E|1|BCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.32014-07-09
294V8Q|1|BVE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
304V8B|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
314V6G|1|CCTRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
324V8C|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
334V8J|1|CVtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.92014-07-09
344V63|1|CZP and E-site tRNA(fMet)Escherichia coliStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
354V67|1|CZP AND E-SITE TRNA(FMET)Escherichia coliCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
364V8E|1|DCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.32014-07-09
374P70|1|QVP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.682014-08-13
384TUC|1|QVP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
394LT8|1|QVP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.142014-08-06
404P6F|1|XVtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.62014-10-01
414LT8|1|XVP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.142014-08-06
424LNT|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
434Y4P|1|1xP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
444WRO|1|2KtRNA-fMet, RNA (30-MER)Escherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
454Z8C|1|2xInitiator Methionine tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
464Y4P|1|2xP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
473CW5|1|AInitiator tRNAEscherichia coliE. coli Initiator tRNAX-RAY DIFFRACTION3.12008-09-02
484W2G|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
494W2F|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
504W2H|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
514W2I|1|AXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
521VY5|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
531VY5|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
544W2F|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
554W2I|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
564W2G|1|CXE-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
574V4Z|1|ACtRNA fMET (unmodified bases), mRNAEscherichia coli70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.512014-07-09
584V5C|1|AVP-SITE TRNA FMET, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
594Z3S|1|2xP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
601VY7|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
611VY6|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
621VY4|1|AXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
631VY6|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
644WPO|1|DXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
654V8D|1|ACTRNA-FMET, MRNAEscherichia coliStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
664V9I|1|AVP-SITE tRNA, mRNAEscherichia coliCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
674V6A|1|AWtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
684V87|1|CCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
694V7M|1|CXRNA (77-MER), RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.452014-07-09
703J5S|1|EP-site tRNA FMetEscherichia coliEttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsELECTRON MICROSCOPY7.52014-01-08
713J78|1|ETP/E-site initiator transfer RNAfMetEscherichia coliStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.32014-08-06
723J77|1|PTP/E-site initiator transfer RNAfMet, messenger RNAEscherichia coliStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.22014-08-06
734LNT|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
744P6F|1|QVtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.62014-10-01
754TUC|1|XVP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
764TUA|1|XVP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
774Z8C|1|1xInitiator Methionine tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
784ZER|1|1xtRNA met, mRNAEscherichia coliCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.12015-05-20
794WQR|1|2KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
804WSD|1|2KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
814WT1|1|2KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
824ZER|1|2xtRNA met, mRNAEscherichia coliCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.12015-05-20
833CW6|1|AInitiator tRNAEscherichia coliE. coli Initiator tRNAX-RAY DIFFRACTION3.32008-09-02
844V6Y|1|A3tRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122014-07-09
854V73|1|A3tRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152014-07-09
864V6R|1|ADP site tRNA, mRNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
874WQY|1|BXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
884V8D|1|CCTRNA-FMET, MRNAEscherichia coliStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
894V97|1|CVP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.522014-07-09
903J78|1|PTP/E-site initiator transfer RNAfMet, messenger RNAEscherichia coliStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.32014-08-06
911VVJ|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.442014-08-06
924LSK|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.482014-08-06
934L71|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.92014-08-06
944LFZ|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.922014-08-06
954LEL|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.92014-08-06
964LFZ|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.922014-08-06
974LEL|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.92014-08-06
981VVJ|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.442014-08-06
994LSK|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.482014-08-06
1004L71|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.92014-08-06
1014WR6|1|2KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.052015-06-10
1024WPO|1|BXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
1034V6G|1|CBTRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1044WQ1|1|2KtRNA-fMET, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.12015-06-10
1054WQ1|1|2LtRNA-fMET, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.12015-06-10
1064WSD|1|2LtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
1074V6Z|1|A3tRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122014-07-09
1084V6P|1|ADP site tRNA, mRNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52014-07-09
1094V6O|1|ADP site tRNA, mRNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72014-07-09
1104W2H|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
1114WQY|1|DXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
1124V69|1|AVE-site tRNA Phe, mRNAEscherichia coliTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72014-07-09
1134V51|1|AVP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
1143DEG|1|BP-tRNAEscherichia coliComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.92008-08-19
1154V51|1|CVP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
1164V5F|1|CWE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
1174WRA|1|2LtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.052015-06-10
1184WZO|1|2LtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1194V6G|1|ACTRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1204V5K|1|AVE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1214V97|1|AVP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.522014-07-09
1224V7P|1|AWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.622014-07-09
1234V7L|1|AXtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1244V7P|1|DWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.622014-07-09
1251VY7|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
1261VY4|1|CXP-site tRNA, mRNAEscherichia coliCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
1274WZO|1|1KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1284WZO|1|2KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1294V6V|1|A3P-tRNA, mRNAEscherichia coliTetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82014-07-09
1304V72|1|A3tRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132014-07-09
1314V74|1|A3tRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coli70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172014-07-09
1324V71|1|A3tRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202014-07-09
1334V70|1|A3tRNA-fMetEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172014-07-09
1344V6Q|1|ADP site tRNA, mRNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
1354V6S|1|BCP site tRNA, mRNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12014-07-09
1362FMT|1|CFORMYL-METHIONYL-TRNAFMET2synthetic constructMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.81999-07-29
1372FMT|1|DFORMYL-METHIONYL-TRNAFMET2synthetic constructMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.81999-07-29
1384V5C|1|CVP-SITE TRNA FMET, MRNAEscherichia coliStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
1394WRA|1|2KtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.052015-06-10
1403J9Y|1|vP-site fMet-tRNAfMet, mRNAEscherichia coliCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92015-04-15
1415AFI|1|vP-site fMet-tRNAfMet, mRNAEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
1424V8F|1|BCTRNA-FMET, MRNAEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
1434V6G|1|CDTRNA FMET (UNMODIFIED BASES)Escherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1444WRO|1|2LtRNA-fMet, RNA (30-MER)Escherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1454V78|1|A3tRNA-fMetEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202014-07-09
1464V77|1|A3tRNA-fMetEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172014-07-09
1474V79|1|A3tRNA-fMetEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152014-07-09
1484V4X|1|ACtRNA fMET (unmodified bases)Escherichia coliCrystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION52014-07-09
1494V8J|1|AVtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.92014-07-09
1504V5K|1|CVE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1513V11|1|DInitiator tRNAEscherichia coliStructure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-RAY DIFFRACTION52012-03-28
1524WT1|1|2LtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1534WQR|1|2LtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
1544V75|1|A3tRNA-fMetEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122014-07-09
1554WR6|1|2LtRNA-fMet, mRNAEscherichia coliComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.052015-06-10
1564V76|1|A3tRNA-fMetEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172014-07-09
1574V6G|1|ADTRNA FMET (UNMODIFIED BASES)Escherichia coliInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1584V7L|1|CXtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1594V6N|1|BDP site tRNA, mRNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12014-07-09
1604V5F|1|AWE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
1614V8Q|1|BWE-SITE or P-SITE TRNA FMETEscherichia coliComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
1624V8O|1|AVPE HYBRID STATE TRNA FMET, MRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3'Escherichia coliCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.82014-07-09
1634V6T|1|AXformyl-methionine specific initiator transfer RNAEscherichia coliStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32014-07-09
1644V8C|1|CDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
1654V8B|1|ADTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
1664V87|1|CDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
1674V8C|1|DDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
1684V87|1|BDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
1694V8B|1|CDTRNA-FMETEscherichia coliCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
1705AFI|1|wP-site fMet-tRNAfMetEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
1713QSY|1|DtRNAEscherichia coliRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.22012-03-21
1724V5K|1|AWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1734V5K|1|CWE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1741EG0|1|OFORMYL-METHIONYL-TRNAEscherichia coliFITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEELECTRON MICROSCOPY11.52000-03-06

Release history

Release2.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.44
Date2015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-09

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11EG0|1|OFITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEELECTRON MICROSCOPY11.571
24V79|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY1572
34V74|1|A370S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY1772
44V6P|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.572
54V6O|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.772
64V6S|1|BCStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.172
74V6N|1|BDStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.172
84V4X|1|ACCrystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION576
94V4Z|1|AC70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.5176
104V6V|1|A3Tetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.872
114V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
124V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
134V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
144V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
154V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
164V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
174V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
184V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
194Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
204Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
214Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
224W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
234W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
241VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
251VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
261VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
271VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
284W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
294Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
304WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
314WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
324V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
334V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
344W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
354ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
364V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
374ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
385AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
393J9Y|1|vCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.973
404V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
414V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
424WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
434WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
444WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.372
454WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0571
464WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
474WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
484WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
494WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
504WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0572
514WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
524WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
534V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
544V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
554WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
564V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
574V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
584WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
594WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
604WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
614WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.373
624V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
634V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
644V7B|1|AVVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.876
654V5F|1|AVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
664V5F|1|CVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
674V69|1|AVTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.776
683J5S|1|EEttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsELECTRON MICROSCOPY7.577
694TUC|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
704V8J|1|AVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
714V97|1|AVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
724V97|1|CVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
734V8J|1|CVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
744LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
754TUB|1|QVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
764TUA|1|QVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
774TUD|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
784P6F|1|QVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
794LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
804L71|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
814LFZ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
824LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
831VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
844LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
854L71|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
861VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
874LFZ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
884LEL|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
894LEL|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
904LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
914P70|1|XVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
924V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
934V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
943DEG|1|BComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.976
954V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
964V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
974V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
984V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
994V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
1004V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
1014V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1024V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
1031VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
1044V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
1054V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1064W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
1074W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
1084Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
1091VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
1101VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
1114W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
1124W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
1134WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
1144WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
1151VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
1164Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
1174P70|1|QVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
1184TUB|1|XVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1194LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1204P6F|1|XVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
1214TUA|1|XVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1224TUD|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
1234TUC|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
1244V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1254V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1264V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1274V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1284V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1294V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1304V7P|1|AWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1314V7P|1|DWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1323J78|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
1334V6Z|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY1272
1344V6Y|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY1272
1354V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
1364WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.368
1374V71|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY2072
1384V77|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY1772
1395AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
1404V5F|1|AWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1414V5F|1|CWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1424V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1434V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1444V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1454V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1464V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1474V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1484V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1494V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1504V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1514V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1524V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1534V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1544V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1554V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1564V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1574V6T|1|AXStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.377
1584V8O|1|AVCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.877
1593J77|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.277
1603J78|1|ETStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
1614V72|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY1372
1624V70|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY1772
1633CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
1643CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
1653V11|1|DStructure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-RAY DIFFRACTION571
1664V73|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY1572
1674V75|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY1272
1684V76|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY1772
1694V6R|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.572
1704V6Q|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.572
1714V78|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY2072
1722FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
1732FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
1743QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277