#PDBTitleRNA source organismCompoundsMethodResolutionDate
12HO7|B (rep)Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphateglmS ribozyme substrate RNA, glmS ribozyme RNAX-RAY DIFFRACTION2.92006-09-26
22GCS|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeglmS ribozyme amino RNA inhibitor, glmS ribozyme RNAX-RAY DIFFRACTION2.12006-09-26
32GCV|BPost-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeglmS ribozyme product oligonucleotide, glmS ribozyme RNAX-RAY DIFFRACTION2.12006-09-26
42H0S|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeglmS ribozyme deoxy RNA inhibitor, glmS ribozyme RNAX-RAY DIFFRACTION2.352006-09-26
52H0W|BPost-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeglmS ribozyme product oligonucleotide, glmS ribozyme RNAX-RAY DIFFRACTION2.42006-09-26
62H0X|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeglmS ribozyme amino RNA inhibitor, glmS ribozyme RNAX-RAY DIFFRACTION2.32006-09-26
72H0Z|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphateglmS ribozyme deoxy RNA inhibitor, glmS ribozyme RNAX-RAY DIFFRACTION2.72006-09-26
82HO6|BPost-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeglmS ribozyme substrate RNA, glmS ribozyme RNAX-RAY DIFFRACTION2.82006-09-26
92Z74|BT. tengcongensis glmS ribozyme bound to glucose-6-phosphateglmS ribozyme substrate RNA, glmS ribozyme RNAX-RAY DIFFRACTION2.22007-09-04
102Z75|BT. tengcongensis glmS ribozyme bound to glucosamine-6-phosphateglmS ribozyme substrate RNA, glmS ribozyme RNAX-RAY DIFFRACTION1.72007-09-04
113B4A|BT. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphateCaldanaerobacter subterraneusglmS ribozyme substrate RNA, glmS ribozyme RNAX-RAY DIFFRACTION2.72007-12-11
123B4B|BT. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkageCaldanaerobacter subterraneusglmS ribozyme substrate with 2'5'-phosphodiester linkage, glmS ribozyme RNAX-RAY DIFFRACTION2.72007-12-11
133B4C|BT. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkageCaldanaerobacter subterraneusglmS ribozyme substrate with a 2'5'-phosphodiester linkage, glmS ribozyme RNAX-RAY DIFFRACTION32007-12-11
144MEG|BIn vitro evolved glmS ribozyme triple mutant, magnesium ion complexglmS triple mutant ribozyme, (121-MER) ribozymeX-RAY DIFFRACTION3.12013-10-16
154MEH|BIn vitro evolved glmS ribozyme triple mutant, calcium ion complexglmS triple mutant ribozyme, (122-MER) ribozymeX-RAY DIFFRACTION3.122013-10-16

Release history

Release1.331.341.351.361.371.381.391.401.411.421.431.441.451.461.471.481.491.501.511.521.531.541.551.561.571.581.591.601.611.621.631.641.651.661.671.681.691.701.711.721.731.741.751.761.771.781.791.801.811.821.831.841.851.861.871.881.89
Date2013-10-192013-10-262013-11-092013-11-162013-11-232013-11-302013-12-072013-12-142013-12-212013-12-282014-01-042014-01-112014-01-182014-01-252014-02-012014-02-082014-02-152014-02-222014-03-012014-03-082014-03-172014-03-222014-03-292014-04-052014-04-122014-04-192014-04-262014-05-032014-05-102014-05-172014-05-312014-06-072014-06-132014-06-202014-06-272014-07-042014-07-182014-07-252014-08-012014-08-082014-08-152014-08-222014-08-292014-09-052014-09-122014-09-192014-09-262014-10-032014-10-102014-10-172014-10-242014-10-312014-11-072014-11-142014-11-212014-11-282014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14MEH|BIn vitro evolved glmS ribozyme triple mutant, calcium ion complexX-RAY DIFFRACTION3.12126
23B4C|BT. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkageX-RAY DIFFRACTION3125
33B4A|BT. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphateX-RAY DIFFRACTION2.7125
42Z74|BT. tengcongensis glmS ribozyme bound to glucose-6-phosphateX-RAY DIFFRACTION2.2125
52H0Z|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphateX-RAY DIFFRACTION2.7125
62Z75|BT. tengcongensis glmS ribozyme bound to glucosamine-6-phosphateX-RAY DIFFRACTION1.7125
72H0X|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeX-RAY DIFFRACTION2.3125
82GCS|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeX-RAY DIFFRACTION2.1125
93B4B|BT. tengcongensis glmS ribozyme with G40A mutation, bound to glucosamine-6-phosphate and a substrate RNA with a 2'5'-phosphodiester linkageX-RAY DIFFRACTION2.7125
102HO7|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphateX-RAY DIFFRACTION2.9125
112HO6|BPost-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeX-RAY DIFFRACTION2.8125
122H0W|BPost-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeX-RAY DIFFRACTION2.4125
132GCV|BPost-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeX-RAY DIFFRACTION2.1125
142H0S|BPre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozymeX-RAY DIFFRACTION2.35125
154MEG|BIn vitro evolved glmS ribozyme triple mutant, magnesium ion complexX-RAY DIFFRACTION3.1126