Equivalence class NR_20.0_48402.7 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6QZP|1|L7 (rep) | 5S ribosomal RNA | 5S rRNA (120-MER) | Homo sapiens | Eukarya | RF00001 | High-resolution cryo-EM structure of the human 80S ribosome | Electron microscopy | 2.9 | 2019-04-24 |
| 2 | 6EK0|1|L7 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | High-resolution cryo-EM structure of the human 80S ribosome | Electron microscopy | 2.9 | 2018-01-24 |
| 3 | 5T2C|1|B | 5S ribosomal RNA | 5S rRNA | Homo sapiens | Eukarya | RF00001 | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | Electron microscopy | 3.6 | 2017-01-25 |
| 4 | 4UG0|1|L7 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | STRUCTURE OF THE HUMAN 80S RIBOSOME | Electron microscopy | 3.6 | 2015-06-10 |
| 5 | 6IP5|1|1B | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | Electron microscopy | 3.9 | 2019-05-29 |
| 6 | 6IP8|1|1B | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | Electron microscopy | 3.9 | 2019-05-29 |
| 7 | 5LKS|1|L7 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | Electron microscopy | 3.6 | 2017-04-26 |
| 8 | 5AJ0|1|A4 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Cryo electron microscopy of actively translating human polysomes (POST state). | Electron microscopy | 3.5 | 2015-05-20 |
| 9 | 6IP6|1|1B | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii) | Electron microscopy | 4.5 | 2019-05-29 |
| 10 | 4V6X|1|A7 | 5S ribosomal RNA | 5S ribosomal RNA | Homo sapiens | Eukarya | RF00001 | Structure of the human 80S ribosome | Electron microscopy | 5 | 2014-07-09 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_48402.7 | NR_20.0_52752.1 | 3.79 | (10) 4V6X|1|A7, 5T2C|1|B, 6IP5|1|1B, 6IP8|1|1B, 5LKS|1|L7, 6EK0|1|L7, 6IP6|1|1B, 4UG0|1|L7, 6QZP|1|L7, 5AJ0|1|A4 | (0) | (7) 6OM7|1|E, 6OLF|1|E, 6OLI|1|E, 6OM0|1|E, 6OLE|1|E, 6OLG|1|A4, 6OLZ|1|A4 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5LKS|1|L7 | Structure-function insights reveal the human ribosome as a cancer target for antibiotics | ELECTRON MICROSCOPY | 3.6 | 120 |
| 2 | 6IP8|1|1B | Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv) | ELECTRON MICROSCOPY | 3.9 | 120 |
| 3 | 6IP5|1|1B | Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii) | ELECTRON MICROSCOPY | 3.9 | 120 |
| 4 | 6IP6|1|1B | Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii) | ELECTRON MICROSCOPY | 4.5 | 120 |
| 5 | 5T2C|1|B | CryoEM structure of the human ribosome at 3.6 Angstrom resolution | ELECTRON MICROSCOPY | 3.6 | 120 |
| 6 | 4UG0|1|L7 | STRUCTURE OF THE HUMAN 80S RIBOSOME | ELECTRON MICROSCOPY | 3.6 | 120 |
| 7 | 6QZP|1|L7 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 120 |
| 8 | 6EK0|1|L7 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 120 |
| 9 | 5AJ0|1|A4 | Cryo electron microscopy of actively translating human polysomes (POST state). | ELECTRON MICROSCOPY | 3.5 | 119 |
| 10 | 4V6X|1|A7 | Structure of the human 80S ribosome | ELECTRON MICROSCOPY | 5 | 121 |