#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11ZDK|1|S (rep)RNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3')STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-ray diffraction2.861998-12-07
22C4Z|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*SUR *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-ray diffraction2.62006-01-05
32C4Y|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-ray diffraction2.682006-01-05
42C4Q|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *PYO*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2ONE -5) COMPLEXX-ray diffraction2.382005-11-07
52BU1|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (5BRU -5) COMPLEXX-ray diffraction2.22005-08-18
62C4Q|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *PYO*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2ONE -5) COMPLEXX-ray diffraction2.382005-11-07
72BU1|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (5BRU -5) COMPLEXX-ray diffraction2.22005-08-18
82C4Z|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*SUR *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-ray diffraction2.62006-01-05
92IZ9|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*U ONEP *AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (4ONE -5) COMPLEXX-ray diffraction2.852006-07-27
102BQ5|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87AE89K mutant) - RNA hairpin complexX-ray diffraction2.912006-03-22
112BNY|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87A mutant) - RNA hairpin complexX-ray diffraction32006-03-22
122C51|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *GP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (G -5) COMPLEXX-ray diffraction2.82006-01-05
132C4Y|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *SUR*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-ray diffraction2.682006-01-05
142BQ5|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87AE89K mutant) - RNA hairpin complexX-ray diffraction2.912006-03-22
151ZDI|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
162IZ8|1|RRNA, (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*CP*UP*CP* AP*CP*CP*CP*AP*UP*GP*U)-3')Escherichia virus MS2MS2-RNA HAIRPIN (C-7) COMPLEXX-ray diffraction3.32006-07-27
171AQ3|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-ray diffraction2.81997-12-24
181AQ4|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')Escherichia virus MS2STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-ray diffraction31997-12-24
192B2G|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-ray diffraction3.022006-05-09
202B2E|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-ray diffraction3.152006-05-09
211ZDH|1|RRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3')synthetic constructMS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
222IZM|1|R5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (C-10) COMPLEXX-ray diffraction2.72007-07-03
231ZDI|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')RNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
241ZDH|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*U P*GP*U)-3')synthetic constructMS2 COAT PROTEIN/RNA COMPLEXX-ray diffraction2.71997-04-21
252IZM|1|S5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (C-10) COMPLEXX-ray diffraction2.72007-07-03
262IZ8|1|SRNA, (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*CP*UP*CP* AP*CP*CP*CP*AP*UP*GP*U)-3')Escherichia virus MS2MS2-RNA HAIRPIN (C-7) COMPLEXX-ray diffraction3.32006-07-27
272BNY|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2 (N87A mutant) - RNA hairpin complexX-ray diffraction32006-03-22
282C50|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *AP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (A -5) COMPLEXX-ray diffraction2.652006-01-05
292C51|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *GP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (G -5) COMPLEXX-ray diffraction2.82006-01-05
302C50|1|R5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *AP*AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (A -5) COMPLEXX-ray diffraction2.652006-01-05
311AQ4|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')Escherichia virus MS2STRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-ray diffraction31997-12-24
322IZ9|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*U ONEP *AP*CP*CP*CP*AP*UP*GP*U)-3'Escherichia virus MS2MS2-RNA HAIRPIN (4ONE -5) COMPLEXX-ray diffraction2.852006-07-27
332B2E|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'RNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-ray diffraction3.152006-05-09
342B2G|1|S5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*UP*GP*U)-3'MS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-ray diffraction3.022006-05-09
351ZDK|1|RRNA (5'-R(P*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*CP*AP*UP*GP*U)-3')STRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-ray diffraction2.861998-12-07
361AQ3|1|SRNA (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP*UP*AP*CP*CP*CP*AP*U P*GP*U)-3')BACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-ray diffraction2.81997-12-24

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.922.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-092016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12B2E|1|SRNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-RAY DIFFRACTION3.1514
22B2E|1|RRNA stemloop from bacteriophage MS2 complexed with an N87S,E89K mutant MS2 capsidX-RAY DIFFRACTION3.1516
32B2G|1|SMS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-RAY DIFFRACTION3.0215
42C51|1|SMS2-RNA HAIRPIN (G -5) COMPLEXX-RAY DIFFRACTION2.813
52IZM|1|RMS2-RNA HAIRPIN (C-10) COMPLEXX-RAY DIFFRACTION2.713
62IZM|1|SMS2-RNA HAIRPIN (C-10) COMPLEXX-RAY DIFFRACTION2.713
72C50|1|SMS2-RNA HAIRPIN (A -5) COMPLEXX-RAY DIFFRACTION2.6513
82BU1|1|SMS2-RNA HAIRPIN (5BRU -5) COMPLEXX-RAY DIFFRACTION2.216
92C4Q|1|SMS2-RNA HAIRPIN (2ONE -5) COMPLEXX-RAY DIFFRACTION2.3816
102BU1|1|RMS2-RNA HAIRPIN (5BRU -5) COMPLEXX-RAY DIFFRACTION2.216
112C4Q|1|RMS2-RNA HAIRPIN (2ONE -5) COMPLEXX-RAY DIFFRACTION2.3816
122IZ8|1|RMS2-RNA HAIRPIN (C-7) COMPLEXX-RAY DIFFRACTION3.316
132IZ8|1|SMS2-RNA HAIRPIN (C-7) COMPLEXX-RAY DIFFRACTION3.313
141ZDH|1|SMS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
151ZDI|1|SRNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
161AQ3|1|SBACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.812
171AQ4|1|SSTRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-RAY DIFFRACTION314
181ZDK|1|SSTRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-RAY DIFFRACTION2.8619
191ZDK|1|RSTRUCTURE OF BACTERIOPHAGE COAT PROTEIN-LOOP RNA COMPLEXX-RAY DIFFRACTION2.8619
201ZDH|1|RMS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.713
211ZDI|1|RRNA BACTERIOPHAGE MS2 COAT PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.716
221AQ4|1|RSTRUCTURE OF A MS2 COAT PROTEIN MUTANT IN COMPLEX WITH AN RNA OPERATORX-RAY DIFFRACTION316
231AQ3|1|RBACTERIOPHAGE MS2 CAPSID PROTEIN/RNA COMPLEXX-RAY DIFFRACTION2.816
242C51|1|RMS2-RNA HAIRPIN (G -5) COMPLEXX-RAY DIFFRACTION2.815
252C50|1|RMS2-RNA HAIRPIN (A -5) COMPLEXX-RAY DIFFRACTION2.6514
262BNY|1|RMS2 (N87A mutant) - RNA hairpin complexX-RAY DIFFRACTION315
272B2G|1|RMS2 Wild-type RNA stemloop complexed with an N87S mutant MS2 capsidX-RAY DIFFRACTION3.0216
282BNY|1|SMS2 (N87A mutant) - RNA hairpin complexX-RAY DIFFRACTION313
292C4Z|1|SMS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-RAY DIFFRACTION2.611
302C4Y|1|SMS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-RAY DIFFRACTION2.6812
312BQ5|1|SMS2 (N87AE89K mutant) - RNA hairpin complexX-RAY DIFFRACTION2.9117
322BQ5|1|RMS2 (N87AE89K mutant) - RNA hairpin complexX-RAY DIFFRACTION2.9119
332C4Y|1|RMS2-RNA HAIRPIN (2THIOURACIL-5) COMPLEXX-RAY DIFFRACTION2.6816
342C4Z|1|RMS2-RNA HAIRPIN (2SU -5-6) COMPLEXX-RAY DIFFRACTION2.615
352IZ9|1|RMS2-RNA HAIRPIN (4ONE -5) COMPLEXX-RAY DIFFRACTION2.8514
362IZ9|1|SMS2-RNA HAIRPIN (4ONE -5) COMPLEXX-RAY DIFFRACTION2.8514
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