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Equivalence class NR_20.0_52752.11 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16ZMI|1|L7 (rep)5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.62020-08-19
26ZM7|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.72020-07-29
36XA1|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.82020-10-07
46Y6X|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Tetracenomycin X bound to the human ribosomeElectron microscopy2.82020-07-08
56Z6N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.92020-07-29
66QZP|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92019-04-24
76Z6L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy32020-07-29
86ZME|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy32020-08-12
96LQM|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state CElectron microscopy3.092020-08-26
106Z6M|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1Electron microscopy3.12020-07-29
116ZMO|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexElectron microscopy3.12020-08-19
126LSR|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state BElectron microscopy3.132020-08-26
136LU8|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a human pre-60S ribosomal subunit - state AElectron microscopy3.132020-08-26
146OLE|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.12019-06-19
156Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy32020-04-15
166OM0|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.12019-06-19
176LSS|1|55S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of a pre-60S ribosomal subunit - state preAElectron microscopy3.232020-08-26
186Y0G|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of human ribosome in classical-PRE stateElectron microscopy3.22020-04-15
197BHP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human Ebp1 - 80S ribosomeElectron microscopy3.32021-02-03
206OLG|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)Electron microscopy3.42019-06-19
216OLI|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)Electron microscopy3.52019-06-19
226Y57|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in hybrid-PRE stateElectron microscopy3.52020-04-15
235T2C|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CryoEM structure of the human ribosome at 3.6 Angstrom resolutionElectron microscopy3.62017-01-25
244UG0|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001STRUCTURE OF THE HUMAN 80S RIBOSOMEElectron microscopy3.62015-06-10
256OM7|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsElectron microscopy3.72019-06-19
266W6L|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the human ribosome-TMCO1 transloconElectron microscopy3.842020-09-02
276OLF|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsElectron microscopy3.92019-06-19
286IP5|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)Electron microscopy3.92019-05-29
296OLZ|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAElectron microscopy3.92019-06-19
306IP8|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)Electron microscopy3.92019-05-29
315LKS|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure-function insights reveal the human ribosome as a cancer target for antibioticsElectron microscopy3.62017-04-26
325AJ0|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo electron microscopy of actively translating human polysomes (POST state).Electron microscopy3.52015-05-20
336IP6|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)Electron microscopy4.52019-05-29
344V6X|1|A75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the human 80S ribosomeElectron microscopy52014-07-09

Release history

Release3.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.235
Date2021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_52752.11NR_20.0_52752.103.190(34) 6OLZ|1|A4, 6LU8|1|5, 6IP6|1|1B, 4V6X|1|A7, 7BHP|1|L7, 6Z6N|1|L7, 6Y2L|1|L7, 6OM7|1|E, 6OLF|1|E, 6LQM|1|5, 5LKS|1|L7, 6ZME|1|L7, 6Y6X|1|L7, 6W6L|1|E, 6OLI|1|E, 6LSS|1|5, 6IP5|1|1B, 4UG0|1|L7, 6ZMO|1|L7, 6Z6M|1|L7, 6Y0G|1|L7, 6OM0|1|E, 6OLE|1|E, 6IP8|1|1B, 5AJ0|1|A4, 6ZM7|1|L7, 6Y57|1|L7, 6QZP|1|L7, 6OLG|1|A4, 6LSR|1|5, 5T2C|1|B, 6ZMI|1|L7, 6Z6L|1|L7, 6XA1|1|L7(0) (1) 6EK0|1|L7

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_52752.11NR_20.0_52752.123.236(34) 6IP6|1|1B, 6Y0G|1|L7, 6IP5|1|1B, 6XA1|1|L7, 5T2C|1|B, 6W6L|1|E, 5LKS|1|L7, 6QZP|1|L7, 5AJ0|1|A4, 6OM7|1|E, 7BHP|1|L7, 4V6X|1|A7, 6OM0|1|E, 6ZMO|1|L7, 4UG0|1|L7, 6OLZ|1|A4, 6ZMI|1|L7, 6OLI|1|E, 6ZME|1|L7, 6OLG|1|A4, 6ZM7|1|L7, 6OLF|1|E, 6Z6N|1|L7, 6OLE|1|E, 6Z6M|1|L7, 6LU8|1|5, 6Z6L|1|L7, 6LSS|1|5, 6Y6X|1|L7, 6LSR|1|5, 6LQM|1|5, 6Y57|1|L7, 6IP8|1|1B, 6Y2L|1|L7(0) (1) 7F5S|1|L7

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V6X|1|A7Structure of the human 80S ribosomeELECTRON MICROSCOPY5121
27BHP|1|L7Cryo-EM structure of the human Ebp1 - 80S ribosomeELECTRON MICROSCOPY3.3120
36W6L|1|ECryo-EM structure of the human ribosome-TMCO1 transloconELECTRON MICROSCOPY3.84119
46LU8|1|5Cryo-EM structure of a human pre-60S ribosomal subunit - state AELECTRON MICROSCOPY3.13120
56LSS|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state preAELECTRON MICROSCOPY3.23120
66LSR|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state BELECTRON MICROSCOPY3.13120
76LQM|1|5Cryo-EM structure of a pre-60S ribosomal subunit - state CELECTRON MICROSCOPY3.09120
86ZME|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY3120
96ZMO|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.1120
106ZM7|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.7120
116ZMI|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.6120
126Z6L|1|L7Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY3120
136Z6N|1|L7Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.9120
146Z6M|1|L7Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.1120
156Y6X|1|L7Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.8120
166XA1|1|L7Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.8120
176QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
186Y0G|1|L7Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.2120
196Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
206Y57|1|L7Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.5120
216OLI|1|EStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.5119
226OLE|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
236OM0|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
246OM7|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.7119
256OLF|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.9119
266OLZ|1|A4Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.9119
276OLG|1|A4Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.4119
285AJ0|1|A4Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.5119
294UG0|1|L7STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.6120
305T2C|1|BCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.6120
316IP6|1|1BCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.5120
326IP5|1|1BCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.9120
336IP8|1|1BCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.9120
345LKS|1|L7Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.6120
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