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Equivalence class NR_20.0_52752.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16QZP|1|L7 (rep)5S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92019-04-24
26EK0|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92018-01-24
36OLE|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.12019-06-19
46Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy32020-04-15
56OM0|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsElectron microscopy3.12019-06-19
66Y0G|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of human ribosome in classical-PRE stateElectron microscopy3.22020-04-15
76OLG|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)Electron microscopy3.42019-06-19
86OLI|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)Electron microscopy3.52019-06-19
96Y57|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in hybrid-PRE stateElectron microscopy3.52020-04-15
105T2C|1|B5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001CryoEM structure of the human ribosome at 3.6 Angstrom resolutionElectron microscopy3.62017-01-25
114UG0|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001STRUCTURE OF THE HUMAN 80S RIBOSOMEElectron microscopy3.62015-06-10
126OM7|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsElectron microscopy3.72019-06-19
136OLF|1|E5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsElectron microscopy3.92019-06-19
146IP5|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)Electron microscopy3.92019-05-29
156OLZ|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAElectron microscopy3.92019-06-19
166IP8|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)Electron microscopy3.92019-05-29
175LKS|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure-function insights reveal the human ribosome as a cancer target for antibioticsElectron microscopy3.62017-04-26
185AJ0|1|A45S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo electron microscopy of actively translating human polysomes (POST state).Electron microscopy3.52015-05-20
196IP6|1|1B5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)Electron microscopy4.52019-05-29
204V6X|1|A75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of the human 80S ribosomeElectron microscopy52014-07-09

Release history

Release3.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.133
Date2020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-01

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_52752.2NR_20.0_52752.13.122(17) 4UG0|1|L7, 6OLG|1|A4, 6OLF|1|E, 6OLE|1|E, 6IP8|1|1B, 6IP6|1|1B, 6IP5|1|1B, 6QZP|1|L7, 6EK0|1|L7, 6OM7|1|E, 5T2C|1|B, 6OM0|1|E, 5LKS|1|L7, 6OLZ|1|A4, 5AJ0|1|A4, 6OLI|1|E, 4V6X|1|A7(3) 6Y57|1|L7, 6Y2L|1|L7, 6Y0G|1|L7(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_52752.2NR_20.0_52752.33.134(20) 6Y0G|1|L7, 4V6X|1|A7, 6QZP|1|L7, 4UG0|1|L7, 6OM7|1|E, 6OM0|1|E, 6OLZ|1|A4, 6OLI|1|E, 6OLG|1|A4, 6OLF|1|E, 6OLE|1|E, 6IP8|1|1B, 6IP6|1|1B, 6IP5|1|1B, 6EK0|1|L7, 5T2C|1|B, 6Y57|1|L7, 5LKS|1|L7, 6Y2L|1|L7, 5AJ0|1|A4(0) (1) 6Y6X|1|L7

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15LKS|1|L7Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.6120
26IP8|1|1BCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.9120
36IP5|1|1BCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.9120
46IP6|1|1BCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.5120
55T2C|1|BCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.6120
64UG0|1|L7STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.6120
76Y57|1|L7Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.5120
86Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
96Y0G|1|L7Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.2120
106EK0|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
116QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
126OM0|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
136OLE|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.1119
146OLI|1|EStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.5119
156OM7|1|EHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.7119
166OLF|1|EHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.9119
176OLZ|1|A4Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.9119
186OLG|1|A4Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.4119
195AJ0|1|A4Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.5119
204V6X|1|A7Structure of the human 80S ribosomeELECTRON MICROSCOPY5121
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