NR_20.0_53745.1

Members (16)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	7ZW0\|1\|sl (rep)	Transfer RNA	tRNA, mRNA	Saccharomyces cerevisiae W303	Eukarya	RF00005	FAP-80S Complex - Rotated state	Electron microscopy	2.4	2022-10-05
2	8AGX\|1\|x	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	Electron microscopy	2.4	2023-03-08
3	8AGX\|1\|y	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	Electron microscopy	2.4	2023-03-08
4	8AAF\|1\|x	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state G	Electron microscopy	2.5	2023-03-08
5	8AAF\|1\|y	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state G	Electron microscopy	2.5	2023-03-08
6	8AGT\|1\|x	Transfer RNA	A-site Ala aminoacyl-tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state F	Electron microscopy	2.6	2023-03-08
7	8AGV\|1\|x	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state H	Electron microscopy	2.6	2023-03-08
8	8AGW\|1\|x	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state D	Electron microscopy	2.6	2023-03-08
9	8AGZ\|1\|x	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	Electron microscopy	2.6	2023-03-08
10	8AGT\|1\|y	Transfer RNA	P-site petidyl-tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state F	Electron microscopy	2.6	2023-03-08
11	8AGV\|1\|y	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state H	Electron microscopy	2.6	2023-03-08
12	8AGW\|1\|y	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state D	Electron microscopy	2.6	2023-03-08
13	8AGZ\|1\|y	Transfer RNA	Ala tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	Electron microscopy	2.6	2023-03-08
14	8AGU\|1\|y	Transfer RNA	P-site tRNA	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast RQC complex in state E	Electron microscopy	2.7	2023-03-08
15	6R84\|1\|B	Transfer RNA	tRNA-Ala	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	Electron microscopy	3.6	2019-06-26
16	6R87\|1\|B	Transfer RNA	tRNA-Ala	Saccharomyces cerevisiae	Eukarya	RF00005	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	Electron microscopy	3.4	2019-06-26

Release history

Release	3.273	3.274	3.275	3.276	3.277	3.278	3.279	3.280	3.281	3.282	3.283	3.284	3.285	3.286	3.287	3.288	3.289	3.290	3.291	3.292	3.293	3.294	3.295	3.296	3.297	3.298	3.299	3.300	3.301	3.302	3.303	3.304	3.305	3.306	3.307	3.308	3.309	3.310	3.311
Date	2023-03-08	2023-03-15	2023-03-22	2023-03-29	2023-04-05	2023-04-12	2023-04-19	2023-04-26	2023-05-03	2023-05-10	2023-05-17	2023-05-24	2023-05-31	2023-06-07	2023-06-14	2023-06-21	2023-06-28	2023-07-05	2023-07-12	2023-07-19	2023-07-26	2023-08-02	2023-08-09	2023-08-16	2023-08-23	2023-08-30	2023-09-06	2023-09-13	2023-09-20	2023-09-27	2023-10-04	2023-10-11	2023-10-18	2023-10-25	2023-11-01	2023-11-08	2023-11-15	2023-11-24	2023-11-29

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_20.0_53745.1	NR_20.0_21015.2	3.273	(3) 6R84\|1\|B, 7ZW0\|1\|sl, 6R87\|1\|B	(13) 8AGU\|1\|y, 8AGX\|1\|y, 8AGT\|1\|y, 8AGX\|1\|x, 8AGT\|1\|x, 8AGW\|1\|y, 8AAF\|1\|y, 8AGW\|1\|x, 8AGV\|1\|y, 8AAF\|1\|x, 8AGV\|1\|x, 8AGZ\|1\|y, 8AGZ\|1\|x	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	8AGX\|1\|x	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	ELECTRON MICROSCOPY	2.4	73
2	8AGZ\|1\|x	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	ELECTRON MICROSCOPY	2.6	73
3	8AGT\|1\|x	Yeast RQC complex in state F	ELECTRON MICROSCOPY	2.6	74
4	8AAF\|1\|x	Yeast RQC complex in state G	ELECTRON MICROSCOPY	2.5	73
5	8AGW\|1\|x	Yeast RQC complex in state D	ELECTRON MICROSCOPY	2.6	74
6	8AGV\|1\|x	Yeast RQC complex in state H	ELECTRON MICROSCOPY	2.6	74
7	8AGT\|1\|y	Yeast RQC complex in state F	ELECTRON MICROSCOPY	2.6	73
8	8AGW\|1\|y	Yeast RQC complex in state D	ELECTRON MICROSCOPY	2.6	73
9	8AGU\|1\|y	Yeast RQC complex in state E	ELECTRON MICROSCOPY	2.7	73
10	8AGV\|1\|y	Yeast RQC complex in state H	ELECTRON MICROSCOPY	2.6	73
11	8AGX\|1\|y	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	ELECTRON MICROSCOPY	2.4	72
12	8AGZ\|1\|y	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	ELECTRON MICROSCOPY	2.6	72
13	8AAF\|1\|y	Yeast RQC complex in state G	ELECTRON MICROSCOPY	2.5	72
14	7ZW0\|1\|sl	FAP-80S Complex - Rotated state	ELECTRON MICROSCOPY	2.4	76
15	6R87\|1\|B	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	ELECTRON MICROSCOPY	3.4	76
16	6R84\|1\|B	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	ELECTRON MICROSCOPY	3.6	76

Equivalence class NR_20.0_53745.1 Current

Release history

Parents

Children