Equivalence class NR_20.0_54627.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4A3G|1|P (rep) | TRANSCRIPT RNA 5'-R(*CP*AP)-3' | Saccharomyces cerevisiae | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid | X-ray diffraction | 3.5 | 2012-02-08 | |||
| 2 | 4A3J|1|P | 5'-R(*CP*AP)-3' | synthetic construct | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP | X-ray diffraction | 3.7 | 2011-12-07 | |||
| 3 | 7K00|1|5 | E-site tRNA | Escherichia coli | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 | |||
| 4 | 5MMI|1|z | E-site tRNA | Spinacia oleracea | Structure of the large subunit of the chloroplast ribosome | Electron microscopy | 3.2 | 2017-01-11 | |||
| 5 | 3J9M|1|u | E-site tRNA | Homo sapiens | Structure of the human mitochondrial ribosome (class 1) | Electron microscopy | 3.5 | 2015-04-15 | |||
| 6 | 6NU2|1|u | E-site tRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | Electron microscopy | 3.9 | 2019-04-17 | |||
| 7 | 6NU3|1|u | E-site tRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | Electron microscopy | 4.4 | 2019-04-17 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4A3J|1|P | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP | X-RAY DIFFRACTION | 3.7 | 2 |
| 2 | 3J9M|1|u | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 2 |
| 3 | 4A3G|1|P | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid | X-RAY DIFFRACTION | 3.5 | 2 |
| 4 | 7K00|1|5 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2 |
| 5 | 6NU2|1|u | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 3.9 | 2 |
| 6 | 6NU3|1|u | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 4.4 | 2 |
| 7 | 5MMI|1|z | Structure of the large subunit of the chloroplast ribosome | ELECTRON MICROSCOPY | 3.2 | 2 |