Equivalence class NR_20.0_56633.6 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7P3K|1|V (rep) | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) | Electron microscopy | 2.9 | 2021-10-27 |
| 2 | 7OIZ|1|V | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | Electron microscopy | 2.9 | 2021-09-15 |
| 3 | 6I0Y|1|V | Transfer RNA | Proline tRNA | Escherichia coli | Bacteria | RF00005 | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | Electron microscopy | 3.2 | 2018-12-05 |
| 4 | 7OJ0|1|V | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 | Electron microscopy | 3.5 | 2021-09-15 |
| 5 | 3JBU|1|v | Transfer RNA | glycine-tRNA | Escherichia coli | Bacteria | RF00005 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.64 | 2016-01-27 |
| 6 | 4UY8|1|V | Transfer RNA | RNA | Escherichia coli | Bacteria | RF00005 | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | Electron microscopy | 3.8 | 2014-10-29 |
| 7 | 5NP6|1|B | Transfer RNA | P-site tRNA-Gly, mRNA | Escherichia coli | Bacteria | RF00005 | 70S structure prior to bypassing | Electron microscopy | 3.6 | 2017-06-14 |
| 8 | 4V5H|1|AV | Transfer RNA | P-SITE TRNA, MRNA | Escherichia coli | Bacteria | RF00005 | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | Electron microscopy | 5.8 | 2014-07-09 |
| 9 | 4V6M|1|AV | Transfer RNA | FtsQ nascent chain, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of the ribosome-SecYE complex in the membrane environment | Electron microscopy | 7.1 | 2014-07-09 |
Release history
| Release | 3.202 | 3.203 | 3.204 | 3.205 | 3.206 | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-10-27 | 2021-11-03 | 2021-11-10 | 2021-11-17 | 2021-11-24 | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 4V5H|1|AV | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | ELECTRON MICROSCOPY | 5.8 | 76 |
| 2 | 4UY8|1|V | Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome | ELECTRON MICROSCOPY | 3.8 | 76 |
| 3 | 6I0Y|1|V | TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel | ELECTRON MICROSCOPY | 3.2 | 77 |
| 4 | 4V6M|1|AV | Structure of the ribosome-SecYE complex in the membrane environment | ELECTRON MICROSCOPY | 7.1 | 77 |
| 5 | 7P3K|1|V | Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) | ELECTRON MICROSCOPY | 2.9 | 75 |
| 6 | 7OIZ|1|V | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | ELECTRON MICROSCOPY | 2.9 | 74 |
| 7 | 7OJ0|1|V | Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2 | ELECTRON MICROSCOPY | 3.5 | 74 |
| 8 | 5NP6|1|B | 70S structure prior to bypassing | ELECTRON MICROSCOPY | 3.6 | 76 |
| 9 | 3JBU|1|v | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.64 | 76 |