#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V4Q|1|CA (rep)16S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462014-07-09
24V4H|1|CA16S RIBOSOMAL RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462014-07-09
34V52|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212014-07-09
44V52|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212014-07-09
54V54|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32014-07-09
64A2I|1|A16S RIBOSOMAL RNAEscherichia coliCryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis FactorELECTRON MICROSCOPY16.52011-11-02
74V4Q|1|AA16S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462014-07-09
84V64|1|CA16S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52014-07-09
94V6C|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192014-07-09
104V54|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32014-07-09
114V64|1|AA16S ribosomal RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52014-07-09
124V53|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542014-07-09
134V4H|1|AA16S RIBOSOMAL RNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462014-07-09
144V5Y|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452014-07-09
154V53|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542014-07-09
164V7V|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292014-07-09
174V7S|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252014-07-09
184V55|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42014-07-09
194ADV|1|A16S RIBOSOMAL RNAEscherichia coliStructure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunitELECTRON MICROSCOPY13.52012-02-15
204V5Y|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452014-07-09
214V57|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52014-07-09
224V55|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42014-07-09
234WWW|1|QA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12014-12-24
244V57|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52014-07-09
254V7T|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192014-07-09
264V6D|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812014-07-09
274V56|1|CA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932014-07-09
284V9P|1|FA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
294YBB|1|AA16S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
304V9O|1|FA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
315IQR|1|2SSU rRNAEscherichia coliStructure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32016-05-04
324U1U|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952014-07-30
334V50|1|AA16S ribosomal RNAEscherichia coliCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222014-07-09
344V9O|1|BA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
355AFI|1|a16S ribosomal RNAEscherichia coli2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
364V6E|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712014-07-09
374U20|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92014-07-30
384V50|1|CA16S ribosomal RNAEscherichia coliCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222014-07-09
394V9P|1|BA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
404V56|1|AA16S rRNAEscherichia coliCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932014-07-09
414U1U|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952014-07-30
424V6C|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192014-07-09
434U26|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82014-07-30
444U24|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92014-07-30
454YBB|1|BA16S rRNAEscherichia coliHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12015-03-18
464U20|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92014-07-30
473J9Y|1|a16S ribosomal RNAEscherichia coliCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92015-04-15
484V6E|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712014-07-09
494V7U|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12014-07-09
504U27|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82014-07-30
514V7B|1|AA16S ribosomal RNAEscherichia coliVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82014-07-09
524V6D|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812014-07-09
534WF1|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092014-11-05
544V9P|1|HA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
554U25|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92014-07-30
564V7T|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192014-07-09
574V9O|1|DA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
584U1V|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32014-07-30
594WOI|1|DA16S ribosomal RNA, Messenger RNAEscherichia coli4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32015-08-05
604V6V|1|AA16S ribosomal RNAEscherichia coliTetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82014-07-09
614V9P|1|DA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
624V7S|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252014-07-09
634WWW|1|XA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12014-12-24
644V9D|1|BA16S rRNA, messenger RNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
654WF1|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092014-11-05
664U27|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82014-07-30
674U1V|1|AA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32014-07-30
684V9D|1|AA16S rRNA, messenger RNAEscherichia coliStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32014-07-09
694V69|1|AA16S rRNAEscherichia coliTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72014-07-09
704V5H|1|AA16S RIBOSOMAL RNAEscherichia coliE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.82014-07-09
714V6M|1|AA16S RIBOSOMAL RNAEscherichia coliStructure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.12014-07-09
724V7V|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292014-07-09
734U25|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92014-07-30
744WOI|1|AA16S ribosomal RNA, Messenger RNAEscherichia coli4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32015-08-05
754V89|1|AA16S rRNAEscherichia coliCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72014-07-09
764V7A|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY92014-07-09
773JCN|1|a16S ribosomal RNAEscherichia coliStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.62016-03-09
784V85|1|AA16S rRNACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22014-07-09
794U26|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82014-07-30
804V76|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172014-07-09
814U24|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92014-07-30
824V6T|1|AA16S ribosomal RNAEscherichia coliStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32014-07-09
833J9Z|1|SA16S ribosomal RNAEscherichia coliActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
844V77|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172014-07-09
854V7U|1|CA16S rRNAEscherichia coliCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12014-07-09
864V6Y|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122014-07-09
873JCE|1|a16S ribosomal RNAEscherichia coliStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22016-01-13
883JCJ|1|g16S ribosomal RNAEscherichia coliStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72016-03-09
894V78|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202014-07-09
904V72|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132014-07-09
914V71|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202014-07-09
924V7I|1|BA16S ribosomal RNAEscherichia coliRibosome-SecY complex.ELECTRON MICROSCOPY9.62014-07-09
934V6K|1|BA16S ribosomal RNAEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252014-07-09
944V73|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152014-07-09
954V79|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152014-07-09
964V74|1|AA16S ribosomal RNAEscherichia coli70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172014-07-09
974V70|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172014-07-09
984V75|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122014-07-09
994V6Z|1|AA16S ribosomal RNAEscherichia coliE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122014-07-09
1004V6L|1|AA16S ribosomal RNAEscherichia coliStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22014-07-09
1013JA1|1|SA16S ribosomal RNAEscherichia coliActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62015-07-01
1024V9O|1|HA16S rRNAEscherichia coliControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92014-07-09
1034V9C|1|CA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32014-07-09
1044V6R|1|AA16S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
1054V6N|1|BA16S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12014-07-09
1064V6Q|1|AA16S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
1074V6O|1|AA16S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72014-07-09
1084V6P|1|AA16S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52014-07-09
1094V9C|1|AA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32014-07-09
1103J2H|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY18.82013-01-16
1113J2G|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY16.52013-01-16
1124V6S|1|BA16S ribosomal RNAEscherichia coliStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12014-07-09
1134V7D|1|BA16S ribosomal RNA, mRNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62014-07-09
1143J2B|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.62013-01-16
1153J2D|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY18.72013-01-16
1164V7C|1|AA16S ribosomal RNAEscherichia coliStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62014-07-09
1173J2E|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY15.32013-01-16
1183J28|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY12.92013-01-16
1193J2F|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY17.62013-01-16
1203J29|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY142013-01-16
1213J2C|1|N16S rRNA body domainEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.22013-01-16
1223J2A|1|N16S rRNAEscherichia coliDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.12013-01-16
1233JBV|1|ARNA (1530-MER)Escherichia coliMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322016-01-27
1243JCD|1|a16S ribosomal RNAEscherichia coliStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72016-01-13
1254V4V|1|AA16S ribosomal RNAEscherichia coliStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152014-07-09
1262YKR|1|A16S RRNAEscherichia coli30S ribosomal subunit with RsgA bound in the presence of GMPPNPELECTRON MICROSCOPY9.82011-08-24
1274V4W|1|AA16S ribosomal RNAEscherichia coliStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152014-07-09
1283JBU|1|A16S rRNAEscherichia coliMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642016-01-27
1294V5B|1|BA16S RIBOSOMAL RNAEscherichia coliStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742014-07-09
1304V5B|1|DA16S RIBOSOMAL RNAEscherichia coliStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742014-07-09
1314V66|1|A116S rRNAEscherichia coliStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92014-07-09
1324V65|1|A116S rRNAEscherichia coliStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92014-07-09
1333DG0|1|A16S Ribosomal RNA from E. coliEscherichia coliCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complexELECTRON MICROSCOPY10.82009-02-03
1343DG4|1|A16S Ribosomal RNA from E. coliEscherichia coliCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complexELECTRON MICROSCOPY12.82009-02-03
1353DG5|1|A16S Ribosomal RNA from E. coliEscherichia coliCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complexELECTRON MICROSCOPY15.52009-02-03
1363DG2|1|A16S Ribosomal RNA from E. coliEscherichia coliCoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complexELECTRON MICROSCOPY102009-02-03
1374V47|1|BA16S RIBOSOMAL RNAEscherichia coliReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.32014-07-09
1384V48|1|BA16S RIBOSOMAL RNAEscherichia coliReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.52014-07-09

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V65|1|A1Structure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY91530
24V66|1|A1Structure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY91530
34V4W|1|AAStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY151488
44V4V|1|AAStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY151488
54V74|1|AA70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY171530
64V79|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY151530
74V78|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY201530
84V71|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY201530
94V72|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY131530
104V6Y|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY121530
114V6Z|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY121530
124V77|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY171530
134V73|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY151530
144V70|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY171530
154V75|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY121530
164V7A|1|AAE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY91530
174V76|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY171530
184V6Q|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.51531
194V6R|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.51531
204V6P|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.51531
214V6O|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.71531
224V6N|1|BAStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.11531
234V6S|1|BAStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.11531
244V6M|1|AAStructure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.11542
254V5H|1|AAE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.81530
265IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31522
274V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
284V6L|1|AAStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.21531
294V6K|1|BAStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.251531
304V69|1|AATernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.71530
313JCE|1|aStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.21533
324V6E|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711533
334V6D|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811533
344WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
354V9C|1|CAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31538
364V9C|1|AAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31539
374WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
385AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91528
393J9Y|1|aCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.91528
403JBU|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.641530
413JBV|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.321530
423JA1|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
434V7I|1|BARibosome-SecY complex.ELECTRON MICROSCOPY9.61530
444V6V|1|AATetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.81531
453J9Z|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
463JCD|1|aStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.71533
474V6E|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711530
484V6D|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811530
494V50|1|CACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
504V50|1|AACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
514V57|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
524V5Y|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.451530
534V52|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
544V53|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
554V55|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
564V64|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
574V54|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
584V4H|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
594V4Q|1|AACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
604A2I|1|ACryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis FactorELECTRON MICROSCOPY16.51530
614V56|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
624V5B|1|BAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
634WWW|1|XACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11530
644V7S|1|CACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251530
654V7V|1|CACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291530
664V7T|1|CACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191530
674V6C|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191530
684V7U|1|CACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11530
694YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11522
704U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
714U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
724U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
734U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
744U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
754U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
764U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
774WF1|1|CACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091539
783JCN|1|aStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.61539
793JCJ|1|gStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.71539
804V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
814V7C|1|AAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.61538
824V7D|1|BAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.61538
834V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
844V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
854V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
864V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
874WF1|1|AACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091538
884U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
894U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
904U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
914U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
924U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
934U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
944U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
954YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11523
964WWW|1|QACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11533
974V7S|1|AACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251533
984V6C|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191533
994V7T|1|AACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191533
1004V7V|1|AACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291533
1014V7U|1|AACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11533
1024V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1034V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1044V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1054V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1064V57|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
1074V56|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
1084V4Q|1|CACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
1094V4H|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
1104V54|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
1114V64|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
1124V53|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
1134V55|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
1144V52|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
1154V5Y|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.451530
1164V5B|1|DAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
1174V85|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.21532
1184V89|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.71532
1194V7B|1|AAVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.81533
1204V6T|1|AAStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.31538
1214ADV|1|AStructure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunitELECTRON MICROSCOPY13.51410
1223J2A|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.11533
1232YKR|1|A30S ribosomal subunit with RsgA bound in the presence of GMPPNPELECTRON MICROSCOPY9.81533
1243J28|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY12.91533
1253J2E|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY15.31533
1263J2F|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY17.61533
1273J2B|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.61533
1283J2G|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY16.51533
1293J29|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY141533
1303J2C|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.2927
1313J2H|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY18.81533
1323J2D|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY18.71533
1334V47|1|BAReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.31487
1343DG2|1|ACoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of a pretranslocation complexELECTRON MICROSCOPY101530
1353DG0|1|ACoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of EF-G-bound translocation complexELECTRON MICROSCOPY10.81530
1363DG5|1|ACoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF3-bound termination complexELECTRON MICROSCOPY15.51530
1373DG4|1|ACoordinates of 16S and 23S rRNAs fitted into the cryo-EM map of RF1-bound termination complexELECTRON MICROSCOPY12.81530
1384V48|1|BAReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.51487