#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15J7L|1|AA (rep)Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction315342016-07-27
24YBB|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.115342015-03-18
35J8A|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.115342016-07-06
45JC9|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0315342016-07-06
54WOI|1|DASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction315392015-08-05
64WOI|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction315382015-08-05
75IT8|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1215342016-07-27
84V9P|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
94V9O|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
105J7L|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction315332016-07-27
114V9P|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
124V9P|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
134V9P|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
145J8A|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.115332016-07-06
154V9O|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
165J91|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9615342016-07-06
176I7V|1|AASmall subunit ribosomal RNA16S ribosmal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.915332018-12-05
184V6C|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1915332014-07-09
195JC9|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0315332016-07-06
204V52|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2115302014-07-09
214V9O|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
224V7T|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1915332014-07-09
234V57|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.515302014-07-09
244WWW|1|QASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.115332014-12-24
256LKQ|1|sSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.115322020-05-06
264V52|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2115302014-07-09
274V57|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.515302014-07-09
284U27|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.815382014-07-30
295J88|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3215342016-07-06
304V7V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2915332014-07-09
314V54|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.315302014-07-09
324WF1|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0915382014-11-05
334YBB|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.115332015-03-18
344U1U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9515382014-07-30
354V64|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.515302014-07-09
364U26|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.815382014-07-30
374V53|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5415302014-07-09
384V9D|1|AASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315382014-07-09
396I7V|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.915332018-12-05
404U24|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.915382014-07-30
414V7S|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2515332014-07-09
424U25|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.915382014-07-30
435IT8|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1215332016-07-27
444V56|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9315302014-07-09
454V9D|1|BASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315392014-07-09
464V54|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.315302014-07-09
474U27|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.815392014-07-30
484V64|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.515302014-07-09
494V53|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5415302014-07-09
504V56|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9315302014-07-09
514V7U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.115332014-07-09
524V55|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction415302014-07-09
534V50|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2215302014-07-09
544V9O|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.915332014-07-09
554WWW|1|XASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.115302014-12-24
564V4Q|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4615302014-07-09
574U20|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.915382014-07-30
584V55|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction415302014-07-09
594U1U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9515392014-07-30
604V50|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2215302014-07-09
614U1V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction315382014-07-30
624U25|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.915392014-07-30
634V6C|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1915302014-07-09
646BY1|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli pH03H9 complexX-ray diffraction3.9415402019-02-27
655J88|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3215332016-07-06
664V4Q|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4615302014-07-09
676BY1|1|BASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF00177E. coli pH03H9 complexX-ray diffraction3.9415412019-02-27
684U26|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.815392014-07-30
694V85|1|AASmall subunit ribosomal RNA16S rRNARF00177Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.215322014-07-09
705J91|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9615332016-07-06
714V7T|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1915302014-07-09
724WF1|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0915392014-11-05
734U24|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.915392014-07-30
744U1V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction315392014-07-30
754V6D|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8115332014-07-09
764U20|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.915392014-07-30
774V89|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.715322014-07-09
784V7S|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2515302014-07-09
794V6D|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8115302014-07-09
804V7V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2915302014-07-09
814V6E|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7115332014-07-09
824V5Y|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-ray diffraction4.4515302014-07-09
834V9C|1|CASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.315382014-07-09
844V9C|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.315392014-07-09
854V5Y|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-ray diffraction4.4515302014-07-09
864V7U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.115302014-07-09
874V6E|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7115302014-07-09
884V5B|1|BASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7415302014-07-09
894V5B|1|DASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7415302014-07-09
905J5B|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.815342016-07-27
914V4H|1|CASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4615302014-07-09
924V4H|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4615302014-07-09
935J5B|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.815332016-07-27
946TC3|1|16S1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.715342020-01-01
956TBV|1|16S1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.715342020-01-01
966Y69|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.8615392020-07-01
975AFI|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF001772.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.915392015-03-11
985NWY|1|0Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF001772.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.915392017-07-19
993R8O|1|ASmall subunit ribosomal RNA16S rRNA, messenger RNARF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315392011-06-01
1006WD0|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy315392020-07-01
1013R8N|1|ASmall subunit ribosomal RNA16S rRNA, messenger RNARF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction315382011-06-01
1026H4N|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy315342018-09-05
1036WDE|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy315392020-07-01
1046ORE|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release complex 70SElectron microscopy2.915342019-06-19
1055H5U|1|hSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.0115342017-01-25
1065WDT|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy315402018-04-25
1075WFS|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy315402018-05-02
1086SZS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.0615402019-12-04
1095MDV|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.9715342016-12-14
1105MGP|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.115392016-12-14
1116ENU|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.115392017-11-22
1125WE4|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.115402018-04-25
1136ENF|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.215392017-11-22
1145U9G|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.215392017-03-22
1156WNW|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.215392020-06-24
1165U9F|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.215392017-03-22
1176WDD|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.215392020-07-01
1183JCE|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.215332016-01-13
1195UYM|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.215392017-06-07
1205MDW|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.0615342016-12-14
1215MDZ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome (empty A site)Electron microscopy3.115342016-12-14
1226C4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.2415342018-02-21
1236WDG|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.315392020-07-01
1246WD1|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.315392020-07-01
1256WDF|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.315392020-07-01
1266OFX|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Non-rotated ribosome (Structure I)Electron microscopy3.315392019-09-25
1276VWL|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.115212020-06-03
1284V80|1|AASmall subunit ribosomal RNA16S rRNARF00177Crystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.315332014-07-09
1294V80|1|CASmall subunit ribosomal RNA16S rRNARF00177Crystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.315302014-07-09
1306OG7|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.315392019-09-25
1315O2R|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.415392017-07-26
1326OGI|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.415392019-09-25
1335WFK|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.415402018-05-02
1345LZD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.415392016-11-23
1355WE6|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.415392018-04-25
1366WNV|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome without free 5S rRNA and with a perturbed PTCElectron microscopy3.515392020-06-24
1376BU8|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.515392018-01-31
1385LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xSmall subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMetEscherichia coliBacteriaRF00177 + RF01852 + RF00005Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.515282016-11-23
1395MDY|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.3515342016-12-21
1405U4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.515332017-01-11
1415UYL|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.615392017-06-14
1425KCR|1|1aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.615392016-08-17
1435IQR|1|2Small subunit ribosomal RNASSU rRNAEscherichia coliBacteriaRF00177Structure of RelA bound to the 70S ribosomeElectron microscopy315332016-05-04
1446WDM|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)Electron microscopy3.615392020-07-01
1456WDK|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)Electron microscopy3.615392020-07-08
1466WD3|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)Electron microscopy3.615392020-07-08
1476WD5|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)Electron microscopy3.615392020-07-08
1486WD2|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)Electron microscopy3.615392020-07-08
1493JBV|1|ASmall subunit ribosomal RNARNA (1530-MER)Escherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.3215302016-01-27
1505WF0|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.615402018-05-02
1515LZA|1|aSmall subunit ribosomal RNA16S ribosomal RNA, SECIS mRNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.615392016-11-23
1526OSQ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.515342019-06-26
1536VWM|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.415082020-06-03
1546VWN|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.415082020-06-03
1555JTE|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.615392016-07-20
1565JU8|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.615392016-07-20
1573JCJ|1|gSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.715392016-03-09
1586ENJ|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.715392017-11-22
1593J9Z|1|SASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.615422015-07-01
1606WDL|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)Electron microscopy3.715392020-07-01
1616WDJ|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)Electron microscopy3.715392020-07-01
1626WD9|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)Electron microscopy3.715392020-07-08
1636WD4|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)Electron microscopy3.715392020-07-08
1646WD8|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)Electron microscopy3.715392020-07-08
1656WD6|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)Electron microscopy3.715392020-07-08
1663JCD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.715332016-01-13
1675L3P|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.715392016-07-20
1686DNC|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.715392018-07-04
1696OSK|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated 70S complex at 60 msElectron microscopy3.615342019-06-26
1706ORL|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.515342019-06-19
1715UYQ|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.815392017-06-07
1726GXM|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.815392018-08-22
1736GWT|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.815392018-08-15
1746WDA|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)Electron microscopy3.815392020-07-08
1756Q9A|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeElectron microscopy3.715342019-04-17
1766OUO|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF2 accommodated state bound 70S complex at long incubation timeElectron microscopy3.715342019-06-19
1775UYP|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.915392017-06-07
1786GXO|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.915392018-08-15
1796GXN|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.915392018-08-15
1806WD7|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)Electron microscopy3.915392020-07-08
1816OGF|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).Electron microscopy3.915392019-09-25
1825UYK|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.915392017-06-07
1836O9J|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S Elongation Competent RibosomeElectron microscopy3.915302019-05-29
1845KPW|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.915392016-09-28
1853J9Y|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.915392015-04-15
1865KCS|1|1aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.915392016-08-17
1875KPS|1|27Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.915392016-09-28
1885UYN|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy415392017-06-07
1896O9K|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S initiation complexElectron microscopy415392019-05-29
1906WDI|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)Electron microscopy415392020-07-01
1916WDB|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)Electron microscopy415392020-07-01
1925KPX|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.915392016-09-28
1936Q97|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeElectron microscopy3.915342019-03-13
1943JBU|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.6415302016-01-27
1956OT3|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF2 accommodated state bound Release complex 70S at 24 msElectron microscopy3.915342019-06-19
1965NP6|1|DSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S structure prior to bypassingElectron microscopy3.615392017-06-14
1976O7K|1|gSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017730S initiation complexElectron microscopy4.215392019-05-29
1986OGG|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).Electron microscopy4.215392019-09-25
1996WDC|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)Electron microscopy4.215392020-07-01
2005KPV|1|26Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)Electron microscopy4.115392016-09-28
2016WDH|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)Electron microscopy4.315392020-07-01
2023JA1|1|SASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.615422015-07-01
2036GXP|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)Electron microscopy4.415392018-08-15
2046NQB|1|ASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Role of Era in Assembly and Homeostasis of the Ribosomal Small SubunitElectron microscopy3.813412019-06-26
2056OST|1|2Small subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177RF2 pre-accommodated state bound Release complex 70S at 24msElectron microscopy4.215342019-06-19
2066Q98|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of tmRNA SmpB bound in P site of E. coli 70S ribosomeElectron microscopy4.315342019-02-27
2073JCN|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IElectron microscopy4.615392016-03-09
2085LZF|1|aSmall subunit ribosomal RNA16S ribosomal RNA, SECIS mRNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)Electron microscopy4.615392016-11-23
2095LZC|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)Electron microscopy4.815392016-11-23
2105NO2|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate)Electron microscopy5.1615342017-05-24
2115NO4|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3)Electron microscopy5.1615342017-05-31
2125NO3|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)Electron microscopy5.1615342017-05-31
2135LZB|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)Electron microscopy5.315392016-11-23
2144V5H|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.Electron microscopy5.815302014-07-09
2155U4J|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.73072017-01-11
2164V69|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Ternary complex-bound E.coli 70S ribosome.Electron microscopy6.715302014-07-09
2174V6M|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of the ribosome-SecYE complex in the membrane environmentElectron microscopy7.115422014-07-09
2184V7B|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Visualization of two tRNAs trapped in transit during EF-G-mediated translocationElectron microscopy6.815332014-07-09
2194V7C|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)Electron microscopy7.615382014-07-09
2204V7D|1|BASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)Electron microscopy7.615382014-07-09
2215MY1|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli expressomeElectron microscopy7.615302017-04-26
2226H58|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeElectron microscopy7.915392018-09-05
2236H58|1|aaSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeElectron microscopy7.915392018-09-05
2246AWD|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complexElectron microscopy8.115392017-10-18
2254V6K|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural insights into cognate vs. near-cognate discrimination during decoding.Electron microscopy8.2515422014-07-09
2264V7A|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)Electron microscopy915302014-07-09
2274V65|1|A1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E. coli ribosome in the Pre-accommodation stateElectron microscopy915302014-07-09
2284V66|1|A1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E. coli ribosome and the tRNAs in Post-accommodation stateElectron microscopy915302014-07-09
2294V6V|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Tetracycline resistance protein Tet(O) bound to the ribosomeElectron microscopy9.815422014-07-09
2304V6T|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingElectron microscopy8.315382014-07-09
2314V7I|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Ribosome-SecY complex.Electron microscopy9.615302014-07-09
2324V6R|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)Electron microscopy11.515422014-07-09
2334V6Q|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)Electron microscopy11.515422014-07-09
2344V48|1|BASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeElectron microscopy11.514872014-07-09
2354V6Y|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)Electron microscopy1215302014-07-09
2364V75|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)Electron microscopy1215302014-07-09
2374V6Z|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)Electron microscopy1215302014-07-09
2384V6N|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)Electron microscopy12.115422014-07-09
2394V47|1|BASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeElectron microscopy12.314872014-07-09
2404V72|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)Electron microscopy1315302014-07-09
2414V6S|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)Electron microscopy13.115422014-07-09
2424V6L|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural insights into cognate vs. near-cognate discrimination during decoding.Electron microscopy13.215422014-07-09
2433J28|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy12.915332013-01-16
2444V6P|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)Electron microscopy13.515422014-07-09
2453J2A|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy13.115332013-01-16
2465ME1|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112Electron microscopy13.515342017-01-11
2475ME0|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112Electron microscopy13.515342017-01-11
2484ADV|1|ASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunitElectron microscopy13.514102012-02-15
2493J2B|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy13.615332013-01-16
2503J29|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy1415332013-01-16
2514V6O|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)Electron microscopy14.715422014-07-09
2523J2C|1|NSmall subunit ribosomal RNA16S rRNA body domainEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy13.29272013-01-16
2535UZ4|1|ASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assemblyElectron microscopy5.815272017-04-19
2544V73|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)Electron microscopy1515302014-07-09
2554V79|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)Electron microscopy1515302014-07-09
2564V4W|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143Electron microscopy1514882014-07-09
2574V4V|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056Electron microscopy1514882014-07-09
2583J2E|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy15.315332013-01-16
2594A2I|1|ASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis FactorElectron microscopy16.515302011-11-02
2604V77|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)Electron microscopy1715302014-07-09
2614V74|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)Electron microscopy1715302014-07-09
2624V70|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)Electron microscopy1715302014-07-09
2634V76|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)Electron microscopy1715302014-07-09
2643J2G|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy16.515332013-01-16
2653J2F|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy17.615332013-01-16
2663J2D|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy18.715332013-01-16
2673J2H|1|NSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMElectron microscopy18.815332013-01-16
2682YKR|1|ASmall subunit ribosomal RNA16S RRNAEscherichia coliBacteriaRF0017730S ribosomal subunit with RsgA bound in the presence of GMPPNPElectron microscopy9.815332011-08-24
2694V78|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)Electron microscopy2015302014-07-09
2704V71|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)Electron microscopy2015302014-07-09

Release history

Release3.1343.1353.136
Date2020-07-082020-07-152020-07-22

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_56726.53NR_20.0_56726.523.134(260) 2YKR|1|A, 3J28|1|N, 3J29|1|N, 3J2A|1|N, 3J2B|1|N, 3J2C|1|N, 3J2D|1|N, 3J2E|1|N, 3J2F|1|N, 3J2G|1|N, 3J2H|1|N, 3J9Y|1|a, 3J9Z|1|SA, 3JA1|1|SA, 3JBU|1|A, 3JBV|1|A, 3JCD|1|a, 3JCE|1|a, 3JCJ|1|g, 3JCN|1|a, 3R8N|1|A, 3R8O|1|A, 4A2I|1|A, 4ADV|1|A, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V47|1|BA, 4V48|1|BA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V4V|1|AA, 4V4W|1|AA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V53|1|AA, 4V53|1|CA, 4V54|1|AA, 4V54|1|CA, 4V55|1|AA, 4V55|1|CA, 4V56|1|AA, 4V56|1|CA, 4V57|1|AA, 4V57|1|CA, 4V5B|1|BA, 4V5B|1|DA, 4V5H|1|AA, 4V5Y|1|AA, 4V5Y|1|CA, 4V64|1|AA, 4V64|1|CA, 4V65|1|A1, 4V66|1|A1, 4V69|1|AA, 4V6C|1|AA, 4V6C|1|CA, 4V6D|1|AA, 4V6D|1|CA, 4V6E|1|AA, 4V6E|1|CA, 4V6K|1|BA, 4V6L|1|AA, 4V6M|1|AA, 4V6N|1|BA, 4V6O|1|AA, 4V6P|1|AA, 4V6Q|1|AA, 4V6R|1|AA, 4V6S|1|BA, 4V6T|1|AA, 4V6V|1|AA, 4V6Y|1|AA, 4V6Z|1|AA, 4V70|1|AA, 4V71|1|AA, 4V72|1|AA, 4V73|1|AA, 4V74|1|AA, 4V75|1|AA, 4V76|1|AA, 4V77|1|AA, 4V78|1|AA, 4V79|1|AA, 4V7A|1|AA, 4V7B|1|AA, 4V7C|1|AA, 4V7D|1|BA, 4V7I|1|BA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V80|1|AA, 4V80|1|CA, 4V85|1|AA, 4V89|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5JTE|1|AA, 5JU8|1|AA, 5KCR|1|1a, 5KCS|1|1a, 5KPS|1|27, 5KPV|1|26, 5KPW|1|26, 5KPX|1|26, 5L3P|1|a, 5LZA|1|a, 5LZB|1|a, 5LZC|1|a, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5LZF|1|a, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5ME0|1|A, 5ME1|1|A, 5MGP|1|a, 5MY1|1|A, 5NO2|1|A, 5NO3|1|A, 5NO4|1|A, 5NP6|1|D, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U4J|1|a, 5U9F|1|A, 5U9G|1|A, 5UYK|1|A, 5UYL|1|A, 5UYM|1|A, 5UYN|1|A, 5UYP|1|A, 5UYQ|1|A, 5UZ4|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WF0|1|a, 5WFK|1|a, 5WFS|1|a, 6AWD|1|A, 6BU8|1|A, 6BY1|1|AA, 6BY1|1|BA, 6C4I|1|a, 6DNC|1|A, 6ENF|1|a, 6ENJ|1|a, 6ENU|1|a, 6GWT|1|a, 6GXM|1|a, 6GXN|1|a, 6GXO|1|a, 6GXP|1|a, 6H4N|1|a, 6H58|1|a, 6H58|1|aa, 6I7V|1|AA, 6I7V|1|BA, 6LKQ|1|s, 6NQB|1|A, 6O7K|1|g, 6O9J|1|a, 6O9K|1|a, 6OFX|1|3, 6OG7|1|3, 6OGF|1|3, 6OGG|1|3, 6OGI|1|3, 6ORE|1|2, 6ORL|1|2, 6OSK|1|2, 6OSQ|1|2, 6OST|1|2, 6OT3|1|2, 6OUO|1|2, 6Q97|1|2, 6Q98|1|2, 6Q9A|1|2, 6SZS|1|a, 6TBV|1|16S1, 6TC3|1|16S1, 6VWL|1|1, 6VWM|1|1, 6VWN|1|1, 6WD0|1|3, 6WD1|1|3, 6WDB|1|3, 6WDC|1|3, 6WDD|1|3, 6WDE|1|3, 6WDF|1|3, 6WDG|1|3, 6WDH|1|3, 6WDI|1|3, 6WDJ|1|3, 6WDL|1|3, 6WDM|1|3, 6WNV|1|3, 6WNW|1|3, 6Y69|1|a(10) 6WD2|1|3, 6WD3|1|3, 6WD4|1|3, 6WD5|1|3, 6WD6|1|3, 6WD7|1|3, 6WD8|1|3, 6WD9|1|3, 6WDA|1|3, 6WDK|1|3(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_56726.53NR_20.0_56726.543.137(270) 2YKR|1|A, 3J28|1|N, 3J29|1|N, 3J2A|1|N, 3J2B|1|N, 3J2C|1|N, 3J2D|1|N, 3J2E|1|N, 3J2F|1|N, 3J2G|1|N, 3J2H|1|N, 3J9Y|1|a, 3J9Z|1|SA, 3JA1|1|SA, 3JBU|1|A, 3JBV|1|A, 3JCD|1|a, 3JCE|1|a, 3JCJ|1|g, 3JCN|1|a, 3R8N|1|A, 3R8O|1|A, 4A2I|1|A, 4ADV|1|A, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V47|1|BA, 4V48|1|BA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V4V|1|AA, 4V4W|1|AA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V53|1|AA, 4V53|1|CA, 4V54|1|AA, 4V54|1|CA, 4V55|1|AA, 4V55|1|CA, 4V56|1|AA, 4V56|1|CA, 4V57|1|AA, 4V57|1|CA, 4V5B|1|BA, 4V5B|1|DA, 4V5H|1|AA, 4V5Y|1|AA, 4V5Y|1|CA, 4V64|1|AA, 4V64|1|CA, 4V65|1|A1, 4V66|1|A1, 4V69|1|AA, 4V6C|1|AA, 4V6C|1|CA, 4V6D|1|AA, 4V6D|1|CA, 4V6E|1|AA, 4V6E|1|CA, 4V6K|1|BA, 4V6L|1|AA, 4V6M|1|AA, 4V6N|1|BA, 4V6O|1|AA, 4V6P|1|AA, 4V6Q|1|AA, 4V6R|1|AA, 4V6S|1|BA, 4V6T|1|AA, 4V6V|1|AA, 4V6Y|1|AA, 4V6Z|1|AA, 4V70|1|AA, 4V71|1|AA, 4V72|1|AA, 4V73|1|AA, 4V74|1|AA, 4V75|1|AA, 4V76|1|AA, 4V77|1|AA, 4V78|1|AA, 4V79|1|AA, 4V7A|1|AA, 4V7B|1|AA, 4V7C|1|AA, 4V7D|1|BA, 4V7I|1|BA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V80|1|AA, 4V80|1|CA, 4V85|1|AA, 4V89|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5JTE|1|AA, 5JU8|1|AA, 5KCR|1|1a, 5KCS|1|1a, 5KPS|1|27, 5KPV|1|26, 5KPW|1|26, 5KPX|1|26, 5L3P|1|a, 5LZA|1|a, 5LZB|1|a, 5LZC|1|a, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5LZF|1|a, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5ME0|1|A, 5ME1|1|A, 5MGP|1|a, 5MY1|1|A, 5NO2|1|A, 5NO3|1|A, 5NO4|1|A, 5NP6|1|D, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U4J|1|a, 5U9F|1|A, 5U9G|1|A, 5UYK|1|A, 5UYL|1|A, 5UYM|1|A, 5UYN|1|A, 5UYP|1|A, 5UYQ|1|A, 5UZ4|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WF0|1|a, 5WFK|1|a, 5WFS|1|a, 6AWD|1|A, 6BU8|1|A, 6BY1|1|AA, 6BY1|1|BA, 6C4I|1|a, 6DNC|1|A, 6ENF|1|a, 6ENJ|1|a, 6ENU|1|a, 6GWT|1|a, 6GXM|1|a, 6GXN|1|a, 6GXO|1|a, 6GXP|1|a, 6H4N|1|a, 6H58|1|a, 6H58|1|aa, 6I7V|1|AA, 6I7V|1|BA, 6LKQ|1|s, 6NQB|1|A, 6O7K|1|g, 6O9J|1|a, 6O9K|1|a, 6OFX|1|3, 6OG7|1|3, 6OGF|1|3, 6OGG|1|3, 6OGI|1|3, 6ORE|1|2, 6ORL|1|2, 6OSK|1|2, 6OSQ|1|2, 6OST|1|2, 6OT3|1|2, 6OUO|1|2, 6Q97|1|2, 6Q98|1|2, 6Q9A|1|2, 6SZS|1|a, 6TBV|1|16S1, 6TC3|1|16S1, 6VWL|1|1, 6VWM|1|1, 6VWN|1|1, 6WD0|1|3, 6WD1|1|3, 6WD2|1|3, 6WD3|1|3, 6WD4|1|3, 6WD5|1|3, 6WD6|1|3, 6WD7|1|3, 6WD8|1|3, 6WD9|1|3, 6WDA|1|3, 6WDB|1|3, 6WDC|1|3, 6WDD|1|3, 6WDE|1|3, 6WDF|1|3, 6WDG|1|3, 6WDH|1|3, 6WDI|1|3, 6WDJ|1|3, 6WDK|1|3, 6WDL|1|3, 6WDM|1|3, 6WNV|1|3, 6WNW|1|3, 6Y69|1|a(0) (1) 6XE0|1|W

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
13J2H|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY18.81533
23J2D|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY18.71533
33J28|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY12.91533
43J2E|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY15.31533
53J2F|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY17.61533
63J2B|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.61533
73J2G|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY16.51533
83J29|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY141533
93J2C|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.2927
103J2A|1|NDissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimMELECTRON MICROSCOPY13.11533
114ADV|1|AStructure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunitELECTRON MICROSCOPY13.51410
126AWD|1|AStructure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complexELECTRON MICROSCOPY8.11539
135ME0|1|AStructure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112ELECTRON MICROSCOPY13.51534
142YKR|1|A30S ribosomal subunit with RsgA bound in the presence of GMPPNPELECTRON MICROSCOPY9.81533
155UZ4|1|AThe cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assemblyELECTRON MICROSCOPY5.81527
166NQB|1|ARole of Era in Assembly and Homeostasis of the Ribosomal Small SubunitELECTRON MICROSCOPY3.81341
175NO4|1|ARsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3)ELECTRON MICROSCOPY5.161534
185NO2|1|ARsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate)ELECTRON MICROSCOPY5.161534
195NO3|1|ARsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3)ELECTRON MICROSCOPY5.161534
204V6T|1|AAStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.31538
214V7B|1|AAVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.81533
224V5B|1|DAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
234V4Q|1|CACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
244V4H|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
254V54|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
264V64|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
274V53|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
284V55|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
294V5Y|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.451530
304V52|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
314V57|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
324V56|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
334V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
346LKQ|1|sThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.11532
354V85|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.21532
364V89|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.71532
374V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
384V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
394V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
404V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
414V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
424V7U|1|AACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11533
434V7V|1|AACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291533
444V7T|1|AACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191533
454V6C|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191533
464V7S|1|AACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251533
474WWW|1|QACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11533
484V80|1|AACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.31533
495J88|1|AAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321534
505JC9|1|AAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031534
515J7L|1|AAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31534
525J8A|1|AAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11534
535IT8|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121534
545J5B|1|AAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81534
555J91|1|AAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961534
564YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11534
576I7V|1|AARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
584U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
594U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
604U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
614U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
624U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
634U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
644U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
654WF1|1|AACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091538
664WWW|1|XACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11530
674V80|1|CACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.31530
684V7S|1|CACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251530
694V7V|1|CACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291530
704V7T|1|CACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191530
714V6C|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191530
724V7U|1|CACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11530
734V57|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
744V5Y|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.451530
754V52|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
764V55|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION41530
774V53|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.541530
784V64|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
794V54|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
804V4H|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
816O9J|1|a70S Elongation Competent RibosomeELECTRON MICROSCOPY3.91530
824A2I|1|ACryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis FactorELECTRON MICROSCOPY16.51530
834V4Q|1|AACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
845MY1|1|AE. coli expressomeELECTRON MICROSCOPY7.61530
854V56|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.931530
864V5B|1|BAStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.741530
875J88|1|BAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321533
885IT8|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121533
895J91|1|BAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961533
905J5B|1|BAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81533
915J8A|1|BAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11533
925J7L|1|BAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31533
935JC9|1|BAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031533
944YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11533
956I7V|1|BARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
964U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
974U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
984U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
994U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
1004U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
1014U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
1024U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
1034WF1|1|CACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091539
1043JCN|1|aStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.61539
1053JCJ|1|gStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.71539
1064V6E|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711530
1074V6D|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811530
1084V50|1|AACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
1094V50|1|CACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
1104V6K|1|BAStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.251542
1114V6L|1|AAStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.21542
1124V7I|1|BARibosome-SecY complex.ELECTRON MICROSCOPY9.61530
1133JBU|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.641530
1143JBV|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.321530
1153JA1|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
1164V6V|1|AATetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.81542
1173J9Z|1|SAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.61542
1184V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
1193R8O|1|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
1205JTE|1|AACryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.61539
1215JU8|1|AACryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.61539
1225KCR|1|1aCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.61539
1236ORL|1|2RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.51534
1246OST|1|2RF2 pre-accommodated state bound Release complex 70S at 24msELECTRON MICROSCOPY4.21534
1256OT3|1|2RF2 accommodated state bound Release complex 70S at 24 msELECTRON MICROSCOPY3.91534
1266OUO|1|2RF2 accommodated state bound 70S complex at long incubation timeELECTRON MICROSCOPY3.71534
1276Y69|1|aCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.861539
1286H58|1|aStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeELECTRON MICROSCOPY7.91539
1296H58|1|aaStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeELECTRON MICROSCOPY7.91539
1306H4N|1|aStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY31534
1316SZS|1|aRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.061540
1325MGP|1|aStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.11539
1336ENU|1|aPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.11539
1346ENF|1|aCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.21539
1355WFK|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.41540
1365WF0|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.61540
1375KPW|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.91539
1385KPV|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)ELECTRON MICROSCOPY4.11539
1395KPS|1|27Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.91539
1405UYP|1|A70S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.91539
1415UYL|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.61539
1425UYK|1|A70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.91539
1435UYN|1|A70S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY41539
1446WD0|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY31539
1456WD3|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)ELECTRON MICROSCOPY3.61539
1466WD5|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)ELECTRON MICROSCOPY3.61539
1476WD2|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)ELECTRON MICROSCOPY3.61539
1486WD4|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B2)ELECTRON MICROSCOPY3.71539
1496WD6|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)ELECTRON MICROSCOPY3.71539
1506WD7|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)ELECTRON MICROSCOPY3.91539
1516WDJ|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)ELECTRON MICROSCOPY3.71539
1526WDH|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)ELECTRON MICROSCOPY4.31539
1536WDL|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)ELECTRON MICROSCOPY3.71539
1546WDA|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)ELECTRON MICROSCOPY3.81539
1556WD8|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-A)ELECTRON MICROSCOPY3.71539
1566DNC|1|AE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.71539
1575U9F|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.21539
1585U9G|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.21539
1595LZC|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)ELECTRON MICROSCOPY4.81539
1605LZB|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)ELECTRON MICROSCOPY5.31539
1615LZA|1|aStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.61539
1626Q9A|1|2Structure of tmRNA SmpB bound past E site of E. coli 70S ribosomeELECTRON MICROSCOPY3.71534
1635NWY|1|02.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.91539
1646ORE|1|2Release complex 70SELECTRON MICROSCOPY2.91534
1655MDY|1|2Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.351534
1665MDW|1|2Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.061534
1675MDZ|1|2Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.11534
1685MDV|1|2Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.971534
1696C4I|1|aConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.241534
1706OSQ|1|2RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.51534
1716OSK|1|2RF1 accommodated 70S complex at 60 msELECTRON MICROSCOPY3.61534
1725KPX|1|26Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.91539
1735LZD|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.41539
1745LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.51528
1755AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91539
1765UYM|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.21539
1776BU8|1|A70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.51539
1786WD9|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)ELECTRON MICROSCOPY3.71539
1796WDB|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)ELECTRON MICROSCOPY41539
1806WDC|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)ELECTRON MICROSCOPY4.21539
1816WDI|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)ELECTRON MICROSCOPY41539
1826WDD|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.21539
1836WDK|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)ELECTRON MICROSCOPY3.61539
1846WDE|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY31539
1856WDM|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)ELECTRON MICROSCOPY3.61539
1865UYQ|1|A70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.81539
1876WNW|1|3Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.21539
1885WE6|1|a70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.41539
1895WDT|1|a70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY31540
1905WE4|1|a70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.11540
1915WFS|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY31540
1926ENJ|1|aPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.71539
1935O2R|1|aCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.41539
1943J9Y|1|aCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.91539
1955KCS|1|1aCryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.91539
1965L3P|1|aCryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.71539
1976GWT|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.81539
1986GXM|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.81539
1996GXN|1|aCryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.91539
2006OG7|1|370S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.31539
2016OGF|1|370S termination complex with RF2 bound to the UGA codon. Partially rotated ribosome with RF2 bound (Structure III).ELECTRON MICROSCOPY3.91539
2026OFX|1|3Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.31539
2034WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
2044V9C|1|AAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31539
2054V9C|1|CAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31538
2064WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
2074V6D|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.811533
2084V6E|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.711533
2093JCE|1|aStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.21533
2106VWM|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.41508
2116VWN|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.41508
2126BY1|1|BAE. coli pH03H9 complexX-RAY DIFFRACTION3.941541
2136BY1|1|AAE. coli pH03H9 complexX-RAY DIFFRACTION3.941540
2144V69|1|AATernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.71530
2154V5H|1|AAE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.81530
2164V6M|1|AAStructure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.11542
2175IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31533
2185U4I|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.51533
2195U4J|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.7307
2205H5U|1|hMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.011534
2216TBV|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.71534
2226TC3|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.71534
2235NP6|1|D70S structure prior to bypassingELECTRON MICROSCOPY3.61539
2246Q97|1|2Structure of tmRNA SmpB bound in A site of E. coli 70S ribosomeELECTRON MICROSCOPY3.91534
2256O7K|1|g30S initiation complexELECTRON MICROSCOPY4.21539
2266O9K|1|a70S initiation complexELECTRON MICROSCOPY41539
2273JCD|1|aStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.71533
2286WNV|1|370S ribosome without free 5S rRNA and with a perturbed PTCELECTRON MICROSCOPY3.51539
2294V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
2304V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
2314V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
2323R8N|1|AStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
2334V7C|1|AAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.61538
2344V7D|1|BAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.61538
2355LZF|1|aStructure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)ELECTRON MICROSCOPY4.61539
2366WDF|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.31539
2376WDG|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.31539
2386WD1|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.31539
2396GXO|1|aCryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.91539
2406OGG|1|370S termination complex with RF2 bound to the UGA codon. Rotated ribosome with RF2 bound (Structure IV).ELECTRON MICROSCOPY4.21539
2416VWL|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.11521
2426OGI|1|370S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.41539
2436GXP|1|aCryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)ELECTRON MICROSCOPY4.41539
2446Q98|1|2Structure of tmRNA SmpB bound in P site of E. coli 70S ribosomeELECTRON MICROSCOPY4.31534
2455ME1|1|AStructure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112ELECTRON MICROSCOPY13.51534
2464V6Q|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.51542
2474V6R|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.51542
2484V6P|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.51542
2494V6O|1|AAStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.71542
2504V6N|1|BAStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.11542
2514V6S|1|BAStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.11542
2524V7A|1|AAE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY91530
2534V75|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY121530
2544V76|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY171530
2554V6Z|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY121530
2564V70|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY171530
2574V77|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY171530
2584V73|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY151530
2594V74|1|AA70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY171530
2604V71|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY201530
2614V72|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY131530
2624V6Y|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY121530
2634V78|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY201530
2644V79|1|AAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY151530
2654V4V|1|AAStructure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY151488
2664V4W|1|AAStructure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY151488
2674V66|1|A1Structure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY91530
2684V65|1|A1Structure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY91530
2694V48|1|BAReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.51487
2704V47|1|BAReal space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.31487

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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