Equivalence class NR_20.0_72076.7 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6FYY|1|2 (rep) | Small subunit ribosomal RNA | 18S ribosomal RNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | Electron microscopy | 3.02 | 2018-12-05 |
| 2 | 6FYX|1|2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | Electron microscopy | 3.5 | 2018-12-05 |
| 3 | 3JAM|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | CryoEM structure of 40S-eIF1A-eIF1 complex from yeast | Electron microscopy | 3.46 | 2015-08-12 |
| 4 | 3J80|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | CryoEM structure of 40S-eIF1-eIF1A preinitiation complex | Electron microscopy | 3.75 | 2014-11-05 |
| 5 | 3J81|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | CryoEM structure of a partial yeast 48S preinitiation complex | Electron microscopy | 4 | 2014-11-05 |
| 6 | 5IT9|1|2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES. | Electron microscopy | 3.8 | 2016-05-18 |
| 7 | 6GSM|1|2 | Small subunit ribosomal RNA | 18S ribosomal RNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex in open conformation | Electron microscopy | 5.15 | 2019-07-31 |
| 8 | 4V92|1|A2 | Small subunit ribosomal RNA | 18S RRNA | Kluyveromyces lactis | Eukarya | RF01960 | Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES | Electron microscopy | 3.7 | 2014-07-09 |
| 9 | 3JAP|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex in closed conformation | Electron microscopy | 4.9 | 2015-08-12 |
| 10 | 6GSN|1|2 | Small subunit ribosomal RNA | 18S rRNA (1798-MER) | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex in closed conformation | Electron microscopy | 5.75 | 2019-06-26 |
| 11 | 3JAQ|1|2 | Small subunit ribosomal RNA | 18S rRNA | Kluyveromyces lactis | Eukarya | RF01960 | Structure of a partial yeast 48S preinitiation complex in open conformation | Electron microscopy | 6 | 2015-08-12 |
Release history
| Release | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 3.100 | 3.101 | 3.102 | 3.103 | 3.104 | 3.105 | 3.106 | 3.107 | 3.108 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 | 2019-11-06 | 2019-11-13 | 2019-11-20 | 2019-11-27 | 2019-12-04 | 2019-12-11 | 2019-12-18 | 2019-12-25 | 2020-01-01 | 2020-01-08 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6FYY|1|2 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C2) | ELECTRON MICROSCOPY | 3.02 | 1768 |
| 2 | 6FYX|1|2 | Structure of a partial yeast 48S preinitiation complex with eIF5 N-terminal domain (model C1) | ELECTRON MICROSCOPY | 3.5 | 1768 |
| 3 | 3JAP|1|2 | Structure of a partial yeast 48S preinitiation complex in closed conformation | ELECTRON MICROSCOPY | 4.9 | 1780 |
| 4 | 3J81|1|2 | CryoEM structure of a partial yeast 48S preinitiation complex | ELECTRON MICROSCOPY | 4 | 1780 |
| 5 | 6GSN|1|2 | Structure of a partial yeast 48S preinitiation complex in closed conformation | ELECTRON MICROSCOPY | 5.75 | 1798 |
| 6 | 5IT9|1|2 | Structure of the yeast Kluyveromyces lactis small ribosomal subunit in complex with the cricket paralysis virus IRES. | ELECTRON MICROSCOPY | 3.8 | 1780 |
| 7 | 3JAM|1|2 | CryoEM structure of 40S-eIF1A-eIF1 complex from yeast | ELECTRON MICROSCOPY | 3.46 | 1780 |
| 8 | 3J80|1|2 | CryoEM structure of 40S-eIF1-eIF1A preinitiation complex | ELECTRON MICROSCOPY | 3.75 | 1779 |
| 9 | 4V92|1|A2 | Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES | ELECTRON MICROSCOPY | 3.7 | 1764 |
| 10 | 3JAQ|1|2 | Structure of a partial yeast 48S preinitiation complex in open conformation | ELECTRON MICROSCOPY | 6 | 1780 |
| 11 | 6GSM|1|2 | Structure of a partial yeast 48S preinitiation complex in open conformation | ELECTRON MICROSCOPY | 5.15 | 1798 |