Equivalence class NR_20.0_73428.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6VMI|1|B (rep) | tRNAval | Homo sapiens | Mitochondria | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII) | Electron microscopy | 2.96 | 2020-08-05 | ||
| 2 | 6VLZ|1|B | tRNAval | Homo sapiens | Mitochondria | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | Electron microscopy | 2.97 | 2020-08-05 | ||
| 3 | 5OOL|1|B | mitochondrial tRNAVal | Homo sapiens | Mitochondria | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | Electron microscopy | 3.06 | 2017-09-13 | ||
| 4 | 5OOM|1|B | mitochondrial tRNAVal | Homo sapiens | Mitochondria | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | Electron microscopy | 3.03 | 2017-09-13 | ||
| 5 | 6ZSC|1|XB | mt-tRNAVal | Homo sapiens | Mitochondria | Human mitochondrial ribosome in complex with E-site tRNA | Electron microscopy | 3.5 | 2020-09-16 | ||
| 6 | 6ZSD|1|XB | mt-tRNAVal | Homo sapiens | Mitochondria | Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA | Electron microscopy | 3.7 | 2020-09-16 | ||
| 7 | 6I9R|1|B | tRNA Val | Homo sapiens | Mitochondria | Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin | Electron microscopy | 3.9 | 2020-07-08 | ||
| 8 | 3J7Y|1|B | mt-tRNAVal | Homo sapiens | Mitochondria | Structure of the large ribosomal subunit from human mitochondria | Electron microscopy | 3.4 | 2014-10-15 | ||
| 9 | 6ZS9|1|XB | mt-tRNAVal | Homo sapiens | Mitochondria | Human mitochondrial ribosome in complex with ribosome recycling factor | Electron microscopy | 4 | 2020-10-14 | ||
| 10 | 6ZSA|1|XB | mt-tRNAVal | Homo sapiens | Mitochondria | Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA | Electron microscopy | 4 | 2020-10-21 | ||
| 11 | 6ZSG|1|XB | mt-tRNA Val | Homo sapiens | Mitochondria | Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA | Electron microscopy | 4 | 2020-10-14 | ||
| 12 | 3J9M|1|B | mt-tRNAVal | Homo sapiens | Mitochondria | Structure of the human mitochondrial ribosome (class 1) | Electron microscopy | 3.5 | 2015-04-15 | ||
| 13 | 6ZSB|1|XB | mt-tRNAVal | Homo sapiens | Mitochondria | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | Electron microscopy | 4.5 | 2020-09-16 | ||
| 14 | 6ZSE|1|XB | mt-tRNAVal | Homo sapiens | Mitochondria | Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA | Electron microscopy | 5 | 2020-09-16 |
Release history
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_73428.3 | NR_20.0_73428.4 | 3.158 | (14) 5OOM|1|B, 6VMI|1|B, 6ZSA|1|XB, 6ZSD|1|XB, 3J7Y|1|B, 6VLZ|1|B, 6ZSG|1|XB, 5OOL|1|B, 6ZSC|1|XB, 6ZS9|1|XB, 6I9R|1|B, 6ZSE|1|XB, 6ZSB|1|XB, 3J9M|1|B | (0) | (6) 7A5I|1|B3, 7A5G|1|B3, 7A5K|1|B3, 7A5H|1|B, 7A5F|1|B3, 7A5J|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6ZSG|1|XB | Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 4 | 59 |
| 2 | 6ZSA|1|XB | Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNA | ELECTRON MICROSCOPY | 4 | 59 |
| 3 | 6ZSD|1|XB | Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNA | ELECTRON MICROSCOPY | 3.7 | 59 |
| 4 | 6ZSC|1|XB | Human mitochondrial ribosome in complex with E-site tRNA | ELECTRON MICROSCOPY | 3.5 | 59 |
| 5 | 6ZSB|1|XB | Human mitochondrial ribosome in complex with mRNA and P-site tRNA | ELECTRON MICROSCOPY | 4.5 | 59 |
| 6 | 6ZS9|1|XB | Human mitochondrial ribosome in complex with ribosome recycling factor | ELECTRON MICROSCOPY | 4 | 59 |
| 7 | 6ZSE|1|XB | Human mitochondrial ribosome in complex with mRNA, A/P-tRNA and P/E-tRNA | ELECTRON MICROSCOPY | 5 | 59 |
| 8 | 6I9R|1|B | Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin | ELECTRON MICROSCOPY | 3.9 | 60 |
| 9 | 6VMI|1|B | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII) | ELECTRON MICROSCOPY | 2.96 | 56 |
| 10 | 6VLZ|1|B | Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI) | ELECTRON MICROSCOPY | 2.97 | 56 |
| 11 | 5OOM|1|B | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | ELECTRON MICROSCOPY | 3.03 | 56 |
| 12 | 5OOL|1|B | Structure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNA | ELECTRON MICROSCOPY | 3.06 | 56 |
| 13 | 3J9M|1|B | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 56 |
| 14 | 3J7Y|1|B | Structure of the large ribosomal subunit from human mitochondria | ELECTRON MICROSCOPY | 3.4 | 57 |