#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17SYS|1|i (rep)Transfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).Electron microscopy3.52022-07-27
27SYR|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).Electron microscopy3.62022-07-27
37SYW|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)Electron microscopy3.72022-07-13
47SYX|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)Electron microscopy3.72022-07-13
56HCJ|1|33Transfer RNAP/E tRNA, mRNAOryctolagus cuniculusEukaryaRF00005Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsElectron microscopy3.82018-10-17
67SYV|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)Electron microscopy3.92022-07-20
77SYT|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)Electron microscopy4.42022-07-13
87SYU|1|iTransfer RNAMet-tRNA-i-MetOryctolagus cuniculusEukaryaRF00005Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)Electron microscopy4.62022-07-13
95K0Y|1|NTransfer RNAtRNA, mRNAOryctolagus cuniculusEukaryaRF00005m48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit faceElectron microscopy5.82016-07-13
106HCQ|1|33Transfer RNAP/E tRNA, mRNAOryctolagus cuniculusEukaryaRF00005Structure of the rabbit collided di-ribosome (collided monosome)Electron microscopy6.52018-10-17

Release history

Release3.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.326
Date2022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_77343.3NR_20.0_77343.23.241(8) 7SYX|1|i, 7SYW|1|i, 7SYV|1|i, 7SYU|1|i, 7SYT|1|i, 6HCQ|1|33, 6HCJ|1|33, 5K0Y|1|N(2) 7SYS|1|i, 7SYR|1|i(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16HCQ|1|33Structure of the rabbit collided di-ribosome (collided monosome)ELECTRON MICROSCOPY6.575
26HCJ|1|33Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.875
37SYR|1|iStructure of the wt IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(wt).ELECTRON MICROSCOPY3.675
47SYS|1|iStructure of the delta dII IRES eIF2-containing 48S initiation complex, closed conformation. Structure 12(delta dII).ELECTRON MICROSCOPY3.575
57SYT|1|iStructure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt)ELECTRON MICROSCOPY4.475
67SYU|1|iStructure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII)ELECTRON MICROSCOPY4.675
75K0Y|1|Nm48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit faceELECTRON MICROSCOPY5.875
87SYX|1|iStructure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII)ELECTRON MICROSCOPY3.775
97SYW|1|iStructure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt)ELECTRON MICROSCOPY3.775
107SYV|1|iStructure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)ELECTRON MICROSCOPY3.975
Copyright 2024 BGSU RNA group. Page generated in 0.7314 s