NR_20.0_83491.2

Members (14)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4RKV\|1\|A (rep)		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	0.88	2014-11-19
2	4RNE\|1\|A		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
3	4RNE\|1\|F		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
4	1J8G\|1\|A		5'-R(UPGPGPGPGPU)-3'				X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution	X-ray diffraction	0.61	2001-11-23
5	4RJ1\|1\|A		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	0.92	2014-11-12
6	4RNE\|1\|B		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
7	1J8G\|1\|C		5'-R(UPGPGPGPGPU)-3'				X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution	X-ray diffraction	0.61	2001-11-23
8	4XK0\|1\|C		RNA (5'-(UPGPGPGPGPU)-3')	synthetic construct			Crystal structure of a tetramolecular RNA G-quadruplex in potassium	X-ray diffraction	1.08	2015-02-11
9	4RNE\|1\|C		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
10	1J8G\|1\|D		5'-R(UPGPGPGPGPU)-3'				X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution	X-ray diffraction	0.61	2001-11-23
11	4RNE\|1\|D		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
12	4RNE\|1\|E		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
13	4RNE\|1\|G		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19
14	4RNE\|1\|H		RNA (5'-R(UPGPGPGPGPU)-3')	synthetic construct			Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-ray diffraction	1.01	2014-11-19

Release history

Release	2.10	2.11	2.12	2.13	2.14	2.15	2.16	2.17	2.18	2.19	2.20	2.21	2.22	2.23	2.24	2.25	2.26	2.27	2.28	2.29	2.30	2.31	2.32	2.33	2.34	2.35	2.36	2.37	2.38	2.39	2.40	2.41	2.42	2.43	2.44	2.45
Date	2015-02-13	2015-02-20	2015-02-27	2015-03-06	2015-03-13	2015-03-20	2015-03-27	2015-04-03	2015-04-10	2015-04-17	2015-04-24	2015-05-01	2015-05-08	2015-05-15	2015-05-22	2015-05-29	2015-06-05	2015-06-12	2015-06-19	2015-06-26	2015-07-03	2015-07-10	2015-07-17	2015-07-24	2015-07-31	2015-08-07	2015-08-14	2015-08-21	2015-08-28	2015-09-04	2015-09-11	2015-09-18	2015-09-25	2015-10-02	2015-10-09	2015-10-16

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_20.0_83491.2	NR_all_83491.1	2.10	(13) 4RNE\|1\|H, 4RNE\|1\|G, 4RNE\|1\|F, 4RNE\|1\|E, 4RNE\|1\|D, 4RNE\|1\|C, 4RNE\|1\|B, 4RNE\|1\|A, 4RKV\|1\|A, 4RJ1\|1\|A, 1J8G\|1\|D, 1J8G\|1\|C, 1J8G\|1\|A	(1) 4XK0\|1\|C	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	1J8G\|1\|D	X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution	X-RAY DIFFRACTION	0.61	6
2	4RJ1\|1\|A	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	0.92	6
3	1J8G\|1\|C	X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution	X-RAY DIFFRACTION	0.61	6
4	4RNE\|1\|G	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	6
5	4RNE\|1\|H	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	6
6	4RNE\|1\|E	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	6
7	4RNE\|1\|F	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	9
8	4RNE\|1\|A	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	9
9	4RNE\|1\|C	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	6
10	4RKV\|1\|A	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	0.88	10
11	4RNE\|1\|D	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	6
12	4RNE\|1\|B	Structural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ions	X-RAY DIFFRACTION	1.01	6
13	1J8G\|1\|A	X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High Resolution	X-RAY DIFFRACTION	0.61	6
14	4XK0\|1\|C	Crystal structure of a tetramolecular RNA G-quadruplex in potassium	X-RAY DIFFRACTION	1.08	6

Coloring options: Nucleotide numbers

Copyright 2024 BGSU RNA group. Page generated in 0.0137 s