#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15J7L|1|DA (rep)Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction328972016-07-27
25J8A|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.128972016-07-06
35JC9|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0328972016-07-06
44YBB|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.128972015-03-18
55IT8|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1228972016-07-27
64WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction328972015-08-05
74WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction328972015-08-05
86I7V|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.928972018-12-05
95J91|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9628972016-07-06
104V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
115J88|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3228972016-07-06
124V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
134V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
144V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
154V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction328972014-07-09
164V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
174V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
184WWW|1|RALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.128542014-12-24
194V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
204V6C|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1928542014-07-09
215J7L|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction328982016-07-27
224U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.828972014-07-30
234V7T|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1928542014-07-09
244WF1|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0928972014-11-05
255J8A|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.128982016-07-06
265JC9|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0328982016-07-06
274V7U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.128542014-07-09
284V7V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2928542014-07-09
294V52|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2128412014-07-09
304U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.928972014-07-30
314U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.928972014-07-30
324V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction328962014-07-09
334U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.828972014-07-30
344V7S|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2528542014-07-09
354V57|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.528412014-07-09
364V52|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2128412014-07-09
374V57|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.528412014-07-09
384V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
394U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9528972014-07-30
404V85|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.228532014-07-09
414V54|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.328412014-07-09
424V64|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.528412014-07-09
434V50|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2228412014-07-09
444V54|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.328412014-07-09
454V64|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.528412014-07-09
464V53|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5428412014-07-09
474V50|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2228412014-07-09
484U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction328972014-07-30
494YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.128982015-03-18
505J88|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3228982016-07-06
514V9C|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.328972014-07-09
524V53|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-ray diffraction3.5428412014-07-09
534V56|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9328412014-07-09
544U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.928972014-07-30
556I7V|1|CALarge subunit ribosomal RNA23S ribsomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.928982018-12-05
564V56|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-ray diffraction3.9328412014-07-09
574U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.828972014-07-30
584V55|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction428412014-07-09
594V4Q|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4628412014-07-09
604V55|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-ray diffraction428412014-07-09
614V4Q|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4628412014-07-09
624V6D|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8128542014-07-09
634U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.928972014-07-30
644U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9528972014-07-30
654V9C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.328972014-07-09
664U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction328972014-07-30
674V89|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-ray diffraction3.728532014-07-09
685IT8|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1228982016-07-27
694V6E|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7128542014-07-09
704WF1|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0928972014-11-05
714U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.928972014-07-30
724U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.828972014-07-30
734U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.928972014-07-30
745J91|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9628982016-07-06
754V6C|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1928412014-07-09
764V5Y|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-ray diffraction4.4528412014-07-09
774WWW|1|YALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.128412014-12-24
784V7T|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1928412014-07-09
794V5Y|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-ray diffraction4.4528412014-07-09
804V6D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.8128412014-07-09
814V7V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2928412014-07-09
824V7S|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2528412014-07-09
834V7U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.128412014-07-09
844V6E|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.7128412014-07-09
854V5B|1|CBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7428412014-07-09
864V5B|1|ABLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of PDF binding helix in complex with the ribosomeX-ray diffraction3.7428412014-07-09
875J5B|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.828972016-07-27
884V4H|1|DBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4628412014-07-09
894V4H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4628412014-07-09
905J5B|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.828982016-07-27
915AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.929002015-03-11
925NWY|1|NLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF025412.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.928972017-07-19
935H5U|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.0128972017-01-25
946H4N|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy329002018-09-05
955MDV|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.9729032016-12-14
965MDW|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.0629032016-12-14
975MGP|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.129002016-12-14
985U9G|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.229032017-03-22
995U9F|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.229032017-03-22
1005MDZ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome (empty A site)Electron microscopy3.129032016-12-14
1015UYM|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.229032017-06-07
1026ENU|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.128712017-11-22
1035WFS|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy329002018-05-02
1043JBV|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.3229032016-01-27
1055WE4|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.129002018-04-25
1066C4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.2429042018-02-21
1074V80|1|BALarge subunit ribosomal RNA23S rRNARF02541Crystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.328542014-07-09
1084V80|1|DALarge subunit ribosomal RNA23S rRNARF02541Crystal structure of the E. coli ribosome bound to CEM-101.X-ray diffraction3.328412014-07-09
1095WDT|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy329002018-04-25
1106ENF|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.228072017-11-22
1115GAE|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliBacteriaRF02541RNC in complex with a translocating SecYEGElectron microscopy3.3328842016-01-27
1123JCE|1|ALarge subunit ribosomal RNA23 ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.229032016-01-13
1135MDY|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.3529032016-12-21
1145LZD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.429032016-11-23
1155WE6|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.429002018-04-25
1166I0Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.228542018-12-05
1176BU8|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.529032018-01-31
1185O2R|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.429002017-07-26
1195WFK|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.429002018-05-02
1205LZE|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.529002016-11-23
1215U4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.529042017-01-11
1225UYL|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)Electron microscopy3.629032017-06-14
1235IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy329042016-05-04
1243JBU|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.6429032016-01-27
1255LZA|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)Electron microscopy3.629002016-11-23
1265KCR|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionElectron microscopy3.628972016-08-17
1275JU8|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAElectron microscopy3.628972016-07-20
1285JTE|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAElectron microscopy3.628972016-07-20
1293J9Z|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.629042015-07-01
1306DNC|1|BLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonElectron microscopy3.729032018-07-04
1313JCJ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.728542016-03-09
1325WF0|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)Electron microscopy3.629002018-05-02
1335UYQ|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)Electron microscopy3.829032017-06-07
1346ENJ|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)Electron microscopy3.728712017-11-22
1355L3P|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexElectron microscopy3.728902016-07-20
1365GAD|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC-SRP-SR complex early stateElectron microscopy3.728832016-01-27
1376GC8|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate - 50S rec*Electron microscopy3.828972018-06-20
1385UYP|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)Electron microscopy3.929032017-06-07
1395UYK|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)Electron microscopy3.929032017-06-07
1406GWT|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)Electron microscopy3.828962018-08-15
1415KPW|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)Electron microscopy3.929032016-09-28
1426GXM|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)Electron microscopy3.828962018-08-22
1435GAG|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP-SR in the closed stateElectron microscopy3.828832016-01-27
1445GAH|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRP with detached NG domainElectron microscopy3.828832016-01-27
1455KPS|1|28Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)Electron microscopy3.929032016-09-28
1465UYN|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)Electron microscopy429032017-06-07
1476GBZ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 5Electron microscopy3.827892018-06-20
1486GXO|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)Electron microscopy3.929002018-08-15
1493J9Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.929002015-04-15
1506GXN|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)Electron microscopy3.928952018-08-15
1515KPX|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)Electron microscopy3.929032016-09-28
1523JCD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)Electron microscopy3.729032016-01-13
1536GC0|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 4Electron microscopy3.827292018-06-20
1544UY8|1|ALarge subunit ribosomal RNARRNA-23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeElectron microscopy3.828542014-10-29
1555KCS|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionElectron microscopy3.929002016-08-17
1563J7Z|1|ALarge subunit ribosomal RNA23S rRNA, P-tRNA CCA-endEscherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmCL nascent chainElectron microscopy3.928542014-10-22
1575NP6|1|YLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S structure prior to bypassingElectron microscopy3.629032017-06-14
1585KPV|1|27Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)Electron microscopy4.129032016-09-28
1595GAF|1|ALarge subunit ribosomal RNA23S ribosomal RNA, tRNA CCAendEscherichia coliBacteriaRF02541RNC in complex with SRPElectron microscopy4.328832016-02-03
1606GXP|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)Electron microscopy4.428962018-08-15
1613JA1|1|LALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.629042015-07-01
1623JCN|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IElectron microscopy4.628972016-03-09
1635LZF|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)Electron microscopy4.629002016-11-23
1646GC4|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 3Electron microscopy4.325862018-07-04
1655LZC|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)Electron microscopy4.829032016-11-23
1665NCO|1|ALarge subunit ribosomal RNA23S rRNA, P-site tRNA-CCA endEscherichia coliBacteriaRF02541Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosomeElectron microscopy4.828832017-05-24
1675LZB|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)Electron microscopy5.329032016-11-23
1686GC6|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 2Electron microscopy4.320922018-07-04
1694CSU|1|BLarge subunit ribosomal RNA23S RRNAEscherichia coliBacteriaRF02541Cryo-EM structures of the 50S ribosome subunit bound with ObgEElectron microscopy5.529032014-06-04
1706GC7|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit assembly intermediate state 1Electron microscopy4.319012018-06-20
1714V5H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.Electron microscopy5.829032014-07-09
1726C4H|1|ALarge subunit ribosomal RNA23S rRNA, P-site tRNA fMetEscherichia coliBacteriaRF02541Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)Electron microscopy3.16362018-02-21
1733J8G|1|BLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunitElectron microscopy528742014-11-26
1744V69|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ternary complex-bound E.coli 70S ribosome.Electron microscopy6.729032014-07-09
1755AKA|1|BLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541EM structure of ribosome-SRP-FtsY complex in closed stateElectron microscopy5.728412015-03-25
1764V6M|1|B8Large subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Structure of the ribosome-SecYE complex in the membrane environmentElectron microscopy7.129042014-07-09
1775ADY|1|BLarge subunit ribosomal RNA23S RRNAEscherichia coliBacteriaRF02541Cryo-EM structures of the 50S ribosome subunit bound with HflXElectron microscopy4.529032015-10-14
1784V7B|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Visualization of two tRNAs trapped in transit during EF-G-mediated translocationElectron microscopy6.828542014-07-09
1793J5L|1|ALarge subunit ribosomal RNA23S ribsomal RNA, 5'-R(*CP*(MA6))-3', 5'-R(*CP*CP*A)-3'Escherichia coliBacteriaRF02541Structure of the E. coli 50S subunit with ErmBL nascent chainElectron microscopy6.628532014-03-26
1805U4J|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.7112017-01-11
1814V7C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)Electron microscopy7.628972014-07-09
1824V7D|1|AALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)Electron microscopy7.628972014-07-09
1836H58|1|AALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02540Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeElectron microscopy7.929002018-09-05
1846H58|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeElectron microscopy7.929002018-09-05
1854V6K|1|ABLarge subunit ribosomal RNAribosomal RNA 23SEscherichia coliBacteriaRF02541Structural insights into cognate vs. near-cognate discrimination during decoding.Electron microscopy8.2529042014-07-09
1864V7A|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)Electron microscopy929032014-07-09
1874V65|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E. coli ribosome in the Pre-accommodation stateElectron microscopy929032014-07-09
1884V66|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E. coli ribosome and the tRNAs in Post-accommodation stateElectron microscopy929032014-07-09
1894V6T|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingElectron microscopy8.329032014-07-09
1902J28|1|BLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541MODEL OF E. COLI SRP BOUND TO 70S RNCSElectron microscopy9.528412006-11-08
1912RDO|1|BLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF0254150S subunit with EF-G(GDPNP) and RRF boundElectron microscopy9.128412008-03-04
1924V6V|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Tetracycline resistance protein Tet(O) bound to the ribosomeElectron microscopy9.829042014-07-09
1934V6R|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)Electron microscopy11.529042014-07-09
1944V6Q|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)Electron microscopy11.529042014-07-09
1954V7I|1|A8Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ribosome-SecY complex.Electron microscopy9.629032014-07-09
1964V48|1|A0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeElectron microscopy11.525362014-07-09
1974V75|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)Electron microscopy1229032014-07-09
1984V6Z|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)Electron microscopy1229032014-07-09
1994V6Y|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)Electron microscopy1229032014-07-09
2003BBX|1|BLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexElectron microscopy1029022008-10-21
2014V6N|1|ABLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)Electron microscopy12.129042014-07-09
2024V47|1|A0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeElectron microscopy12.325362014-07-09
2034V72|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)Electron microscopy1329032014-07-09
2044V6S|1|ABLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)Electron microscopy13.129042014-07-09
2054V6L|1|BBLarge subunit ribosomal RNA50S ribosomal RNA 23SEscherichia coliBacteriaRF02541Structural insights into cognate vs. near-cognate discrimination during decoding.Electron microscopy13.229042014-07-09
2064V6P|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)Electron microscopy13.529042014-07-09
2074V6O|1|BBLarge subunit ribosomal RNA23S ribomosomal RNAEscherichia coliBacteriaRF02541Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)Electron microscopy14.729042014-07-09
2084V73|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)Electron microscopy1529032014-07-09
2094V79|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)Electron microscopy1529032014-07-09
2104V4W|1|B0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143Electron microscopy1527402014-07-09
2114V4V|1|B0Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056Electron microscopy1527402014-07-09
2124V76|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)Electron microscopy1729032014-07-09
2134V70|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)Electron microscopy1729032014-07-09
2144V74|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)Electron microscopy1729032014-07-09
2154V77|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)Electron microscopy1729032014-07-09
2161C2W|1|BLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF0254123S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTIONElectron microscopy7.529042000-04-10
2174V78|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)Electron microscopy2029032014-07-09
2184V71|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)Electron microscopy2029032014-07-09

Release history

Release3.513.52
Date2018-12-072018-12-14

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_83717.41NR_20.0_83717.403.51(215) 1C2W|1|B, 2J28|1|B, 2RDO|1|B, 3BBX|1|B, 3J5L|1|A, 3J7Z|1|A, 3J8G|1|B, 3J9Y|1|A, 3J9Z|1|LA, 3JA1|1|LA, 3JBU|1|b, 3JBV|1|b, 3JCD|1|A, 3JCE|1|A, 3JCJ|1|A, 3JCN|1|A, 4CSU|1|B, 4U1U|1|BA, 4U1U|1|DA, 4U1V|1|BA, 4U1V|1|DA, 4U20|1|BA, 4U20|1|DA, 4U24|1|BA, 4U24|1|DA, 4U25|1|BA, 4U25|1|DA, 4U26|1|BA, 4U26|1|DA, 4U27|1|BA, 4U27|1|DA, 4UY8|1|A, 4V47|1|A0, 4V48|1|A0, 4V4H|1|BB, 4V4H|1|DB, 4V4Q|1|BB, 4V4Q|1|DB, 4V4V|1|B0, 4V4W|1|B0, 4V50|1|BB, 4V50|1|DB, 4V52|1|BB, 4V52|1|DB, 4V53|1|BB, 4V53|1|DB, 4V54|1|BB, 4V54|1|DB, 4V55|1|BB, 4V55|1|DB, 4V56|1|BB, 4V56|1|DB, 4V57|1|BB, 4V57|1|DB, 4V5B|1|AB, 4V5B|1|CB, 4V5H|1|BB, 4V5Y|1|BB, 4V5Y|1|DB, 4V64|1|BB, 4V64|1|DB, 4V65|1|BB, 4V66|1|BB, 4V69|1|BB, 4V6C|1|BA, 4V6C|1|DA, 4V6D|1|BA, 4V6D|1|DA, 4V6E|1|BA, 4V6E|1|DA, 4V6K|1|AB, 4V6L|1|BB, 4V6M|1|B8, 4V6N|1|AB, 4V6O|1|BB, 4V6P|1|BB, 4V6Q|1|BB, 4V6R|1|BB, 4V6S|1|AB, 4V6T|1|BA, 4V6V|1|BA, 4V6Y|1|BA, 4V6Z|1|BA, 4V70|1|BA, 4V71|1|BA, 4V72|1|BA, 4V73|1|BA, 4V74|1|BA, 4V75|1|BA, 4V76|1|BA, 4V77|1|BA, 4V78|1|BA, 4V79|1|BA, 4V7A|1|BA, 4V7B|1|BA, 4V7C|1|BA, 4V7D|1|AA, 4V7I|1|A8, 4V7S|1|BA, 4V7S|1|DA, 4V7T|1|BA, 4V7T|1|DA, 4V7U|1|BA, 4V7U|1|DA, 4V7V|1|BA, 4V7V|1|DA, 4V80|1|BA, 4V80|1|DA, 4V85|1|BA, 4V89|1|BA, 4V9C|1|BA, 4V9C|1|DA, 4V9D|1|CA, 4V9D|1|DA, 4V9O|1|AA, 4V9O|1|CA, 4V9O|1|EA, 4V9O|1|GA, 4V9P|1|AA, 4V9P|1|CA, 4V9P|1|EA, 4V9P|1|GA, 4WF1|1|BA, 4WF1|1|DA, 4WOI|1|BA, 4WOI|1|CA, 4WWW|1|RA, 4WWW|1|YA, 4YBB|1|CA, 4YBB|1|DA, 5ADY|1|B, 5AFI|1|A, 5AKA|1|B, 5GAD|1|A, 5GAE|1|A, 5GAF|1|A, 5GAG|1|A, 5GAH|1|A, 5H5U|1|A, 5IQR|1|1, 5IT8|1|CA, 5IT8|1|DA, 5J5B|1|CA, 5J5B|1|DA, 5J7L|1|CA, 5J7L|1|DA, 5J88|1|CA, 5J88|1|DA, 5J8A|1|CA, 5J8A|1|DA, 5J91|1|CA, 5J91|1|DA, 5JC9|1|CA, 5JC9|1|DA, 5JTE|1|BA, 5JU8|1|BA, 5KCR|1|1A, 5KCS|1|1A, 5KPS|1|28, 5KPV|1|27, 5KPW|1|27, 5KPX|1|27, 5L3P|1|A, 5LZA|1|A, 5LZB|1|A, 5LZC|1|A, 5LZD|1|A, 5LZE|1|A, 5LZF|1|A, 5MDV|1|1, 5MDW|1|1, 5MDY|1|1, 5MDZ|1|1, 5MGP|1|A, 5NCO|1|A, 5NP6|1|Y, 5NWY|1|N, 5O2R|1|A, 5U4I|1|A, 5U4J|1|A, 5U9F|1|01, 5U9G|1|01, 5UYK|1|01, 5UYL|1|01, 5UYM|1|01, 5UYN|1|01, 5UYP|1|01, 5UYQ|1|01, 5WDT|1|A, 5WE4|1|A, 5WE6|1|A, 5WF0|1|A, 5WFK|1|A, 5WFS|1|A, 6BU8|1|01, 6C4H|1|A, 6C4I|1|A, 6DNC|1|B, 6ENF|1|A, 6ENJ|1|A, 6ENU|1|A, 6GBZ|1|A, 6GC0|1|A, 6GC4|1|A, 6GC6|1|A, 6GC7|1|A, 6GC8|1|A, 6GWT|1|A, 6GXM|1|A, 6GXN|1|A, 6GXO|1|A, 6GXP|1|A, 6H4N|1|A, 6H58|1|A, 6H58|1|AA(3) 6I0Y|1|A, 6I7V|1|CA, 6I7V|1|DA(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_83717.41NR_20.0_83717.423.53(218) 1C2W|1|B, 2J28|1|B, 2RDO|1|B, 3BBX|1|B, 3J5L|1|A, 3J7Z|1|A, 3J8G|1|B, 3J9Y|1|A, 3J9Z|1|LA, 3JA1|1|LA, 3JBU|1|b, 3JBV|1|b, 3JCD|1|A, 3JCE|1|A, 3JCJ|1|A, 3JCN|1|A, 4CSU|1|B, 4U1U|1|BA, 4U1U|1|DA, 4U1V|1|BA, 4U1V|1|DA, 4U20|1|BA, 4U20|1|DA, 4U24|1|BA, 4U24|1|DA, 4U25|1|BA, 4U25|1|DA, 4U26|1|BA, 4U26|1|DA, 4U27|1|BA, 4U27|1|DA, 4UY8|1|A, 4V47|1|A0, 4V48|1|A0, 4V4H|1|BB, 4V4H|1|DB, 4V4Q|1|BB, 4V4Q|1|DB, 4V4V|1|B0, 4V4W|1|B0, 4V50|1|BB, 4V50|1|DB, 4V52|1|BB, 4V52|1|DB, 4V53|1|BB, 4V53|1|DB, 4V54|1|BB, 4V54|1|DB, 4V55|1|BB, 4V55|1|DB, 4V56|1|BB, 4V56|1|DB, 4V57|1|BB, 4V57|1|DB, 4V5B|1|AB, 4V5B|1|CB, 4V5H|1|BB, 4V5Y|1|BB, 4V5Y|1|DB, 4V64|1|BB, 4V64|1|DB, 4V65|1|BB, 4V66|1|BB, 4V69|1|BB, 4V6C|1|BA, 4V6C|1|DA, 4V6D|1|BA, 4V6D|1|DA, 4V6E|1|BA, 4V6E|1|DA, 4V6K|1|AB, 4V6L|1|BB, 4V6M|1|B8, 4V6N|1|AB, 4V6O|1|BB, 4V6P|1|BB, 4V6Q|1|BB, 4V6R|1|BB, 4V6S|1|AB, 4V6T|1|BA, 4V6V|1|BA, 4V6Y|1|BA, 4V6Z|1|BA, 4V70|1|BA, 4V71|1|BA, 4V72|1|BA, 4V73|1|BA, 4V74|1|BA, 4V75|1|BA, 4V76|1|BA, 4V77|1|BA, 4V78|1|BA, 4V79|1|BA, 4V7A|1|BA, 4V7B|1|BA, 4V7C|1|BA, 4V7D|1|AA, 4V7I|1|A8, 4V7S|1|BA, 4V7S|1|DA, 4V7T|1|BA, 4V7T|1|DA, 4V7U|1|BA, 4V7U|1|DA, 4V7V|1|BA, 4V7V|1|DA, 4V80|1|BA, 4V80|1|DA, 4V85|1|BA, 4V89|1|BA, 4V9C|1|BA, 4V9C|1|DA, 4V9D|1|CA, 4V9D|1|DA, 4V9O|1|AA, 4V9O|1|CA, 4V9O|1|EA, 4V9O|1|GA, 4V9P|1|AA, 4V9P|1|CA, 4V9P|1|EA, 4V9P|1|GA, 4WF1|1|BA, 4WF1|1|DA, 4WOI|1|BA, 4WOI|1|CA, 4WWW|1|RA, 4WWW|1|YA, 4YBB|1|CA, 4YBB|1|DA, 5ADY|1|B, 5AFI|1|A, 5AKA|1|B, 5GAD|1|A, 5GAE|1|A, 5GAF|1|A, 5GAG|1|A, 5GAH|1|A, 5H5U|1|A, 5IQR|1|1, 5IT8|1|CA, 5IT8|1|DA, 5J5B|1|CA, 5J5B|1|DA, 5J7L|1|CA, 5J7L|1|DA, 5J88|1|CA, 5J88|1|DA, 5J8A|1|CA, 5J8A|1|DA, 5J91|1|CA, 5J91|1|DA, 5JC9|1|CA, 5JC9|1|DA, 5JTE|1|BA, 5JU8|1|BA, 5KCR|1|1A, 5KCS|1|1A, 5KPS|1|28, 5KPV|1|27, 5KPW|1|27, 5KPX|1|27, 5L3P|1|A, 5LZA|1|A, 5LZB|1|A, 5LZC|1|A, 5LZD|1|A, 5LZE|1|A, 5LZF|1|A, 5MDV|1|1, 5MDW|1|1, 5MDY|1|1, 5MDZ|1|1, 5MGP|1|A, 5NCO|1|A, 5NP6|1|Y, 5NWY|1|N, 5O2R|1|A, 5U4I|1|A, 5U4J|1|A, 5U9F|1|01, 5U9G|1|01, 5UYK|1|01, 5UYL|1|01, 5UYM|1|01, 5UYN|1|01, 5UYP|1|01, 5UYQ|1|01, 5WDT|1|A, 5WE4|1|A, 5WE6|1|A, 5WF0|1|A, 5WFK|1|A, 5WFS|1|A, 6BU8|1|01, 6C4H|1|A, 6C4I|1|A, 6DNC|1|B, 6ENF|1|A, 6ENJ|1|A, 6ENU|1|A, 6GBZ|1|A, 6GC0|1|A, 6GC4|1|A, 6GC6|1|A, 6GC7|1|A, 6GC8|1|A, 6GWT|1|A, 6GXM|1|A, 6GXN|1|A, 6GXO|1|A, 6GXP|1|A, 6H4N|1|A, 6H58|1|A, 6H58|1|AA, 6I0Y|1|A, 6I7V|1|CA, 6I7V|1|DA(0) (1) 6HRM|1|1

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
11C2W|1|B23S RRNA STRUCTURE FITTED TO A CRYO-ELECTRON MICROSCOPIC MAP AT 7.5 ANGSTROMS RESOLUTIONELECTRON MICROSCOPY7.52904
23J8G|1|BElectron cryo-microscopy structure of EngA bound with the 50S ribosomal subunitELECTRON MICROSCOPY52874
36GC7|1|A50S ribosomal subunit assembly intermediate state 1ELECTRON MICROSCOPY4.31901
46GC6|1|A50S ribosomal subunit assembly intermediate state 2ELECTRON MICROSCOPY4.32092
56GC4|1|A50S ribosomal subunit assembly intermediate state 3ELECTRON MICROSCOPY4.32586
66GBZ|1|A50S ribosomal subunit assembly intermediate state 5ELECTRON MICROSCOPY3.82789
76GC0|1|A50S ribosomal subunit assembly intermediate state 4ELECTRON MICROSCOPY3.82729
84V65|1|BBStructure of the E. coli ribosome in the Pre-accommodation stateELECTRON MICROSCOPY92903
94V66|1|BBStructure of the E. coli ribosome and the tRNAs in Post-accommodation stateELECTRON MICROSCOPY92903
103BBX|1|BThe Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexELECTRON MICROSCOPY102902
114V4V|1|B0Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056ELECTRON MICROSCOPY152740
124V4W|1|B0Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143ELECTRON MICROSCOPY152740
134V75|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122903
144V70|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172903
154V72|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132903
164V73|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152903
174V74|1|BA70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172903
184V76|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172903
194V77|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172903
204V78|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202903
214V6Z|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122903
224V6Y|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122903
234V7A|1|BAE. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)ELECTRON MICROSCOPY92903
244V71|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202903
254V79|1|BAE. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152903
264CSU|1|BCryo-EM structures of the 50S ribosome subunit bound with ObgEELECTRON MICROSCOPY5.52903
274V6S|1|ABStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12904
284V6N|1|ABStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12904
294V6O|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72904
304V6P|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52904
314V6R|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52904
324V6Q|1|BBStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52904
333JBV|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903
343JA1|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
355LZF|1|AStructure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)ELECTRON MICROSCOPY4.62900
366GXO|1|ACryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)ELECTRON MICROSCOPY3.92900
374V7D|1|AAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure)ELECTRON MICROSCOPY7.62897
384V7C|1|BAStructure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure)ELECTRON MICROSCOPY7.62897
394V9C|1|DAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
404WOI|1|BA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
414U1U|1|BACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
424U20|1|BACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
434U25|1|BACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
444U27|1|BACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
454WF1|1|BACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
464U1V|1|BACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
474U26|1|BACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
484U24|1|BACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
494V9D|1|CAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
503JCN|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.62897
516ENF|1|ACryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.22807
526ENJ|1|APolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.72871
536ENU|1|APolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.12871
544V7B|1|BAVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82854
554V6T|1|BAStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32903
564V6M|1|B8Structure of the ribosome-SecYE complex in the membrane environmentELECTRON MICROSCOPY7.12904
574V5H|1|BBE.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.ELECTRON MICROSCOPY5.82903
584V6V|1|BATetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82904
594V5B|1|ABStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
604V54|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
614V4Q|1|BBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
624V4H|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
634V64|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
644V53|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
654V55|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
664V5Y|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452841
674V52|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
684V57|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
694V56|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
704V50|1|BBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
714V7U|1|DACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
724WWW|1|YACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
734V80|1|DACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.32841
744V7S|1|DACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
754V7V|1|DACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
764V7T|1|DACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
774V6C|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
784V6E|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712841
794V6D|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812841
805J88|1|CAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322898
815IT8|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122898
825J91|1|CAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962898
835J5B|1|CAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82898
845J8A|1|CAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12898
855J7L|1|CAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32898
865JC9|1|CAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032898
874YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12898
884WF1|1|DACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
894U1U|1|DACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
904U20|1|DACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
914U1V|1|DACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
924U27|1|DACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
934U25|1|DACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
944U26|1|DACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
954U24|1|DACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
966I7V|1|CARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92898
974V9D|1|DAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
984V9C|1|BAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
994WOI|1|CA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
1004V9P|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1014V9O|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1024V9P|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1034V9O|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1043J7Z|1|AStructure of the E. coli 50S subunit with ErmCL nascent chainELECTRON MICROSCOPY3.92854
1056I0Y|1|ATnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.22854
1064UY8|1|AMolecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosomeELECTRON MICROSCOPY3.82854
1074V9O|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1084V9P|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1094V9P|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1104V9O|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
1113JCJ|1|AStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.72854
1124V85|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
1134V89|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)X-RAY DIFFRACTION3.72853
1144V6D|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.812854
1154V6E|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.712854
1163J5L|1|AStructure of the E. coli 50S subunit with ErmBL nascent chainELECTRON MICROSCOPY6.62853
1174V7U|1|BACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
1184V7T|1|BACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
1194V6C|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
1204WWW|1|RACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
1214V80|1|BACrystal structure of the E. coli ribosome bound to CEM-101.X-RAY DIFFRACTION3.32854
1224V7S|1|BACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
1234V7V|1|BACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
1246I7V|1|DARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92897
1255KCR|1|1ACryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolutionELECTRON MICROSCOPY3.62897
1264YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12897
1275J5B|1|DAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82897
1285J91|1|DAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962897
1295J8A|1|DAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12897
1305J7L|1|DAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32897
1315JC9|1|DAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032897
1325IT8|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122897
1335J88|1|DAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322897
1344V50|1|DBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
1354V56|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin.X-RAY DIFFRACTION3.932841
1364V57|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
1374V55|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF).X-RAY DIFFRACTION42841
1384V53|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin.X-RAY DIFFRACTION3.542841
1394V52|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
1404V5Y|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).X-RAY DIFFRACTION4.452841
1414V64|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
1424V54|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
1434V4H|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
1444V4Q|1|DBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
1452J28|1|BMODEL OF E. COLI SRP BOUND TO 70S RNCSELECTRON MICROSCOPY9.52841
1464V5B|1|CBStructure of PDF binding helix in complex with the ribosomeX-RAY DIFFRACTION3.742841
1476GC8|1|A50S ribosomal subunit assembly intermediate - 50S rec*ELECTRON MICROSCOPY3.82897
1485AKA|1|BEM structure of ribosome-SRP-FtsY complex in closed stateELECTRON MICROSCOPY5.72841
1493JBU|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.642903
1504V7I|1|A8Ribosome-SecY complex.ELECTRON MICROSCOPY9.62903
1515ADY|1|BCryo-EM structures of the 50S ribosome subunit bound with HflXELECTRON MICROSCOPY4.52903
1524V6L|1|BBStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY13.22904
1534V6K|1|ABStructural insights into cognate vs. near-cognate discrimination during decoding.ELECTRON MICROSCOPY8.252904
1545NP6|1|Y70S structure prior to bypassingELECTRON MICROSCOPY3.62903
1555L3P|1|ACryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complexELECTRON MICROSCOPY3.72890
1566GXM|1|ACryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State II)ELECTRON MICROSCOPY3.82896
1576GXN|1|ACryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State III)ELECTRON MICROSCOPY3.92895
1586GWT|1|ACryo-EM structure of an E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and Pint-tRNA (State I)ELECTRON MICROSCOPY3.82896
1596GXP|1|ACryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP(RF3-only)ELECTRON MICROSCOPY4.42896
1603J9Z|1|LAActivation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.62904
1614V69|1|BBTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72903
1623JCE|1|AStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
1633JCD|1|AStructure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4)ELECTRON MICROSCOPY3.72903
1645H5U|1|AMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.012897
1655JTE|1|BACryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNAELECTRON MICROSCOPY3.62897
1665JU8|1|BACryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNAELECTRON MICROSCOPY3.62897
1675NWY|1|N2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92897
1685LZE|1|AStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.52900
1696BU8|1|0170S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.52903
1705UYK|1|0170S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)ELECTRON MICROSCOPY3.92903
1715UYL|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon (Structure II)ELECTRON MICROSCOPY3.62903
1725UYM|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.22903
1735UYQ|1|0170S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)ELECTRON MICROSCOPY3.82903
1745UYP|1|0170S ribosome bound with near-cognate ternary complex base-paired to A site codon, open 30S (Structure II-nc)ELECTRON MICROSCOPY3.92903
1755UYN|1|0170S ribosome bound with near-cognate ternary complex not base-paired to A site codon (Structure I-nc)ELECTRON MICROSCOPY42903
1765U9F|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.22903
1776DNC|1|BE.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codonELECTRON MICROSCOPY3.72903
1786H58|1|AStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeELECTRON MICROSCOPY7.92900
1796H4N|1|AStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY32900
1806H58|1|AAStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli RibosomeELECTRON MICROSCOPY7.92900
1815MGP|1|AStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12900
1825O2R|1|ACryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.42900
1835AFI|1|A2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92900
1843J9Y|1|ACryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92900
1855KCS|1|1ACryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolutionELECTRON MICROSCOPY3.92900
1865WE6|1|A70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.42900
1875WE4|1|A70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.12900
1885WDT|1|A70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32900
1895WFK|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.42900
1905WF0|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)ELECTRON MICROSCOPY3.62900
1915WFS|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY32900
1925KPX|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)ELECTRON MICROSCOPY3.92903
1935KPS|1|28Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)ELECTRON MICROSCOPY3.92903
1945KPV|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)ELECTRON MICROSCOPY4.12903
1955KPW|1|27Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)ELECTRON MICROSCOPY3.92903
1966C4H|1|AConformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)ELECTRON MICROSCOPY3.1636
1976C4I|1|AConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.242904
1985MDV|1|1Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972903
1995MDZ|1|1Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.12903
2005MDW|1|1Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.062903
2015U9G|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.22903
2025LZA|1|AStructure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC)ELECTRON MICROSCOPY3.62900
2035LZD|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.42903
2045LZC|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)ELECTRON MICROSCOPY4.82903
2055LZB|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)ELECTRON MICROSCOPY5.32903
2065GAE|1|ARNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
2075GAG|1|ARNC in complex with SRP-SR in the closed stateELECTRON MICROSCOPY3.82883
2085GAD|1|ARNC-SRP-SR complex early stateELECTRON MICROSCOPY3.72883
2095GAF|1|ARNC in complex with SRPELECTRON MICROSCOPY4.32883
2105GAH|1|ARNC in complex with SRP with detached NG domainELECTRON MICROSCOPY3.82883
2115NCO|1|AQuaternary complex between SRP, SR, and SecYEG bound to the translating ribosomeELECTRON MICROSCOPY4.82883
2125MDY|1|1Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.352903
2135IQR|1|1Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32904
2145U4I|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.52904
2155U4J|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.711
2164V48|1|A0Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosomeELECTRON MICROSCOPY11.52536
2172RDO|1|B50S subunit with EF-G(GDPNP) and RRF boundELECTRON MICROSCOPY9.12841
2184V47|1|A0Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosomeELECTRON MICROSCOPY12.32536

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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