NR_20.0_90506.27

Members (109)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5TBW\|1\|1+ 5TBW\|1\|4 (rep)	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2017-07-26
2	5TBW\|1\|AR+ 5TBW\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2017-07-26
3	4V88\|1\|A5+ 4V88\|1\|A8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	3308	2014-07-09
4	4V88\|1\|A1+ 4V88\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	3307	2014-07-09
5	5I4L\|1\|5+ 5I4L\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2016-06-22
6	5I4L\|1\|1+ 5I4L\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2016-06-22
7	5MEI\|1\|AR+ 5MEI\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	3307	2017-06-28
8	5MEI\|1\|1+ 5MEI\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	3307	2017-06-28
9	6HHQ\|1\|AR+ 6HHQ\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	3305	2019-02-20
10	6HHQ\|1\|1+ 6HHQ\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2019-02-20
11	5OBM\|1\|5+ 5OBM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	3292	2017-12-13
12	5OBM\|1\|1+ 5OBM\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	3256	2017-12-13
13	5LYB\|1\|5+ 5LYB\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmn	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	3308	2016-11-23
14	5NDV\|1\|1+ 5NDV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	3235	2017-12-13
15	5ON6\|1\|1+ 5ON6\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	3307	2018-02-28
16	5LYB\|1\|1+ 5LYB\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmn	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	3307	2016-11-23
17	5ON6\|1\|AR+ 5ON6\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	3307	2018-02-28
18	5NDV\|1\|5+ 5NDV\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	3245	2017-12-13
19	5NDW\|1\|1+ 5NDW\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	3248	2017-12-13
20	5NDW\|1\|5+ 5NDW\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	3238	2017-12-13
21	5NDG\|1\|5+ 5NDG\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	3284	2017-12-13
22	5NDG\|1\|1+ 5NDG\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	3236	2017-12-13
23	5TGM\|1\|1+ 5TGM\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-Phe	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	3307	2017-01-18
24	5TGM\|1\|5+ 5TGM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-Phe	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	3308	2017-01-18
25	4V7R\|1\|B1+ 4V7R\|1\|B3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome.	X-ray diffraction	4	3364	2014-07-09
26	4V7R\|1\|D1+ 4V7R\|1\|D3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome.	X-ray diffraction	4	3364	2014-07-09
27	5DAT\|1\|5+ 5DAT\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	3327	2016-08-31
28	5DGV\|1\|5+ 5DGV\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP(8AN)(Pro)*(Pro))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	3307	2016-12-14
29	5DAT\|1\|1+ 5DAT\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	3307	2016-08-31
30	5DGV\|1\|1+ 5DGV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP(8AN)(Pro)*(Pro))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	3306	2016-12-14
31	5DGE\|1\|5+ 5DGE\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP*(NA))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	3308	2017-01-25
32	5TGA\|1\|5+ 5TGA\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	3308	2016-11-23
33	5DGF\|1\|5+ 5DGF\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	3327	2016-12-14
34	5TGA\|1\|1+ 5TGA\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	3307	2016-11-23
35	5DGF\|1\|1+ 5DGF\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	3307	2016-12-14
36	5DGE\|1\|1+ 5DGE\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP*(NA))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	3307	2017-01-25
37	5DC3\|1\|5+ 5DC3\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	3327	2016-06-01
38	5DC3\|1\|1+ 5DC3\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	3307	2016-06-01
39	4U4R\|1\|1+ 4U4R\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	3307	2014-10-22
40	4U4R\|1\|5+ 4U4R\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	3308	2014-10-22
41	4U3U\|1\|5+ 4U3U\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	3308	2014-10-22
42	4U3U\|1\|1+ 4U3U\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	3307	2014-10-22
43	4U3M\|1\|1+ 4U3M\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25s rRNA, 5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
44	4U4Q\|1\|5+ 4U4Q\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
45	4U3M\|1\|5+ 4U3M\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25s rRNA, 5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
46	4U4U\|1\|1+ 4U4U\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
47	4U4Q\|1\|1+ 4U4Q\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
48	4U4U\|1\|5+ 4U4U\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
49	4U52\|1\|5+ 4U52\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	3308	2014-10-22
50	4U52\|1\|1+ 4U52\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	3307	2014-10-22
51	5M1J\|1\|14+ 5M1J\|1\|44	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	3453	2017-01-18
52	4U6F\|1\|1+ 4U6F\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2014-10-22
53	4U6F\|1\|5+ 4U6F\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2014-10-22
54	4U4N\|1\|5+ 4U4N\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2014-10-22
55	4U4Z\|1\|5+ 4U4Z\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	3308	2014-10-22
56	4U4N\|1\|1+ 4U4N\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2014-10-22
57	4U4Z\|1\|1+ 4U4Z\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	3307	2014-10-22
58	5T62\|1\|A+ 5T62\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S Ribosomal RNA, 5.8S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	Electron microscopy	3.1	3362	2017-02-08
59	4U3N\|1\|5+ 4U3N\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
60	4U4Y\|1\|5+ 4U4Y\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
61	4U3N\|1\|1+ 4U3N\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
62	4U55\|1\|5+ 4U55\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
63	4U4Y\|1\|1+ 4U4Y\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
64	3JCT\|1\|1+ 3JCT\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN58-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	Electron microscopy	3.08	3216	2016-06-01
65	4U51\|1\|5+ 4U51\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
66	4U51\|1\|1+ 4U51\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
67	4U55\|1\|1+ 4U55\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
68	4U50\|1\|5+ 4U50\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3308	2014-10-22
69	4U50\|1\|1+ 4U50\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	3307	2014-10-22
70	5H4P\|1\|1+ 5H4P\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	Electron microscopy	3.07	3249	2017-01-25
71	5JUP\|1\|B+ 5JUP\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	3467	2016-10-05
72	6HD7\|1\|1+ 6HD7\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the ribosome-NatA complex	Electron microscopy	3.4	3493	2018-12-19
73	4U53\|1\|1+ 4U53\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	3307	2014-10-22
74	4U53\|1\|5+ 4U53\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	3308	2014-10-22
75	5APO\|1\|5+ 5APO\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	Electron microscopy	3.41	3270	2015-12-16
76	4U56\|1\|1+ 4U56\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	3307	2014-10-22
77	4U56\|1\|5+ 4U56\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	3308	2014-10-22
78	5MC6\|1\|BQ+ 5MC6\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	3323	2017-01-18
79	6GQB\|1\|1+ 6GQB\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S ribosomal RNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	Electron microscopy	3.9	3381	2018-07-11
80	5JUU\|1\|B+ 5JUU\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	3465	2016-10-05
81	5JUT\|1\|B+ 5JUT\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	3467	2016-10-05
82	5JUO\|1\|B+ 5JUO\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	3467	2016-10-05
83	6GQV\|1\|1+ 6GQV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	Electron microscopy	4	3381	2018-07-11
84	5JUS\|1\|B+ 5JUS\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)	Electron microscopy	4.2	3467	2016-10-05
85	6FT6\|1\|1+ 6FT6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 7S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	Electron microscopy	3.9	3220	2018-03-28
86	6ELZ\|1\|1+ 6ELZ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes	Electron microscopy	3.3	2615	2017-12-27
87	5T6R\|1\|A+ 5T6R\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S Ribosomal RNA, 5.8S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex	Electron microscopy	4.2	3362	2017-02-08
88	5APN\|1\|5+ 5APN\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	Electron microscopy	3.91	3270	2015-12-16
89	4U4O\|1\|5+ 4U4O\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	3308	2014-10-22
90	4U4O\|1\|1+ 4U4O\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	3307	2014-10-22
91	4V8Y\|1\|B5+ 4V8Y\|1\|B8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	Electron microscopy	4.3	3305	2014-07-09
92	6GQ1\|1\|1+ 6GQ1\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5S ribosomal RNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)	Electron microscopy	4.4	3381	2018-07-11
93	5GAK\|1\|1+ 5GAK\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	Electron microscopy	3.88	3323	2016-02-24
94	6EM1\|1\|1+ 6EM1\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	Electron microscopy	3.6	1943	2017-12-27
95	6I7O\|1\|BQ	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	Electron microscopy	5.3	3127	2019-01-16
96	6I7O\|1\|YQ	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	Electron microscopy	5.3	3127	2019-01-16
97	6C0F\|1\|1+ 6C0F\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast nucleolar pre-60S ribosomal subunit (state 2)	Electron microscopy	3.7	1515	2018-03-14
98	3J6Y\|1\|2S+ 3J6Y\|1\|8S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)	Electron microscopy	6.1	3466	2014-06-11
99	3J6X\|1\|2S+ 3J6X\|1\|8S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)	Electron microscopy	6.1	3466	2014-06-11
100	3J77\|1\|2S+ 3J77\|1\|8S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	Electron microscopy	6.2	3445	2014-08-06
101	3J78\|1\|2S+ 3J78\|1\|8S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	Electron microscopy	6.3	3460	2014-08-06
102	4V8Z\|1\|B5+ 4V8Z\|1\|B8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	Electron microscopy	6.6	3305	2014-07-09
103	6CB1\|1\|1+ 6CB1\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	35S pre-ribosomal RNA miscRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast nucleolar pre-60S ribosomal subunit (state 3)	Electron microscopy	4.6	1528	2018-03-14
104	5Z3G\|1\|A+ 5Z3G\|1\|B	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)	Electron microscopy	3.65	1657	2018-04-11
105	4V8T\|1\|5+ 4V8T\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1	Electron microscopy	8.1	3308	2014-07-09
106	4V7F\|1\|1	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	Arx1 pre-60S particle.	Electron microscopy	8.7	3394	2014-07-09
107	4V6I\|1\|DA+ 4V6I\|1\|DB	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome	Electron microscopy	8.8	3511	2014-07-09
108	5JCS\|1\|x	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE	Electron microscopy	9.5	3394	2016-11-16
109	5FL8\|1\|x	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02540	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE	Electron microscopy	9.5	2779	2015-12-02

Release history

Release	3.62	3.63	3.64
Date	2019-02-22	2019-03-01	2019-03-08

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_20.0_90506.27	NR_20.0_90506.26	3.62	(107) 3J6X\|1\|2S+3J6X\|1\|8S, 3J6Y\|1\|2S+3J6Y\|1\|8S, 3J77\|1\|2S+3J77\|1\|8S, 3J78\|1\|2S+3J78\|1\|8S, 3JCT\|1\|1+3JCT\|1\|2, 4U3M\|1\|1+4U3M\|1\|4, 4U3M\|1\|5+4U3M\|1\|8, 4U3N\|1\|1+4U3N\|1\|4, 4U3N\|1\|5+4U3N\|1\|8, 4U3U\|1\|1+4U3U\|1\|4, 4U3U\|1\|5+4U3U\|1\|8, 4U4N\|1\|1+4U4N\|1\|4, 4U4N\|1\|5+4U4N\|1\|8, 4U4O\|1\|1+4U4O\|1\|4, 4U4O\|1\|5+4U4O\|1\|8, 4U4Q\|1\|1+4U4Q\|1\|4, 4U4Q\|1\|5+4U4Q\|1\|8, 4U4R\|1\|1+4U4R\|1\|4, 4U4R\|1\|5+4U4R\|1\|8, 4U4U\|1\|1+4U4U\|1\|4, 4U4U\|1\|5+4U4U\|1\|8, 4U4Y\|1\|1+4U4Y\|1\|4, 4U4Y\|1\|5+4U4Y\|1\|8, 4U4Z\|1\|1+4U4Z\|1\|4, 4U4Z\|1\|5+4U4Z\|1\|8, 4U50\|1\|1+4U50\|1\|4, 4U50\|1\|5+4U50\|1\|8, 4U51\|1\|1+4U51\|1\|4, 4U51\|1\|5+4U51\|1\|8, 4U52\|1\|1+4U52\|1\|4, 4U52\|1\|5+4U52\|1\|8, 4U53\|1\|1+4U53\|1\|4, 4U53\|1\|5+4U53\|1\|8, 4U55\|1\|1+4U55\|1\|4, 4U55\|1\|5+4U55\|1\|8, 4U56\|1\|1+4U56\|1\|4, 4U56\|1\|5+4U56\|1\|8, 4U6F\|1\|1+4U6F\|1\|4, 4U6F\|1\|5+4U6F\|1\|8, 4V6I\|1\|DA+4V6I\|1\|DB, 4V7F\|1\|1, 4V7R\|1\|B1+4V7R\|1\|B3, 4V7R\|1\|D1+4V7R\|1\|D3, 4V88\|1\|A1+4V88\|1\|A4, 4V88\|1\|A5+4V88\|1\|A8, 4V8T\|1\|5+4V8T\|1\|8, 4V8Y\|1\|B5+4V8Y\|1\|B8, 4V8Z\|1\|B5+4V8Z\|1\|B8, 5APN\|1\|5+5APN\|1\|8, 5APO\|1\|5+5APO\|1\|8, 5DAT\|1\|1+5DAT\|1\|4, 5DAT\|1\|5+5DAT\|1\|8, 5DC3\|1\|1+5DC3\|1\|4, 5DC3\|1\|5+5DC3\|1\|8, 5DGE\|1\|1+5DGE\|1\|4, 5DGE\|1\|5+5DGE\|1\|8, 5DGF\|1\|1+5DGF\|1\|4, 5DGF\|1\|5+5DGF\|1\|8, 5DGV\|1\|1+5DGV\|1\|4, 5DGV\|1\|5+5DGV\|1\|8, 5FL8\|1\|x, 5GAK\|1\|1+5GAK\|1\|4, 5H4P\|1\|1+5H4P\|1\|4, 5I4L\|1\|1+5I4L\|1\|4, 5I4L\|1\|5+5I4L\|1\|8, 5JCS\|1\|x, 5JUO\|1\|B+5JUO\|1\|C, 5JUP\|1\|B+5JUP\|1\|C, 5JUS\|1\|B+5JUS\|1\|C, 5JUT\|1\|B+5JUT\|1\|C, 5JUU\|1\|B+5JUU\|1\|C, 5LYB\|1\|1+5LYB\|1\|4, 5LYB\|1\|5+5LYB\|1\|8, 5M1J\|1\|14+5M1J\|1\|44, 5MC6\|1\|BQ+5MC6\|1\|BS, 5MEI\|1\|1+5MEI\|1\|4, 5MEI\|1\|AR+5MEI\|1\|AT, 5NDG\|1\|1+5NDG\|1\|4, 5NDG\|1\|5+5NDG\|1\|8, 5NDV\|1\|1+5NDV\|1\|4, 5NDV\|1\|5+5NDV\|1\|8, 5NDW\|1\|1+5NDW\|1\|4, 5NDW\|1\|5+5NDW\|1\|8, 5OBM\|1\|1+5OBM\|1\|4, 5OBM\|1\|5+5OBM\|1\|8, 5ON6\|1\|1+5ON6\|1\|4, 5ON6\|1\|AR+5ON6\|1\|AT, 5T62\|1\|A+5T62\|1\|C, 5T6R\|1\|A+5T6R\|1\|C, 5TBW\|1\|1+5TBW\|1\|4, 5TBW\|1\|AR+5TBW\|1\|AT, 5TGA\|1\|1+5TGA\|1\|4, 5TGA\|1\|5+5TGA\|1\|8, 5TGM\|1\|1+5TGM\|1\|4, 5TGM\|1\|5+5TGM\|1\|8, 5Z3G\|1\|A+5Z3G\|1\|B, 6C0F\|1\|1+6C0F\|1\|2, 6CB1\|1\|1+6CB1\|1\|2, 6ELZ\|1\|1+6ELZ\|1\|2, 6EM1\|1\|1+6EM1\|1\|2, 6FT6\|1\|1+6FT6\|1\|2, 6GQ1\|1\|1+6GQ1\|1\|4, 6GQB\|1\|1+6GQB\|1\|4, 6GQV\|1\|1+6GQV\|1\|4, 6HD7\|1\|1+6HD7\|1\|4, 6I7O\|1\|BQ, 6I7O\|1\|YQ	(2) 6HHQ\|1\|1+6HHQ\|1\|4, 6HHQ\|1\|AR+6HHQ\|1\|AT	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_20.0_90506.27	NR_20.0_90506.28	3.65	(109) 3J6X\|1\|2S+3J6X\|1\|8S, 3J6Y\|1\|2S+3J6Y\|1\|8S, 3J77\|1\|2S+3J77\|1\|8S, 3J78\|1\|2S+3J78\|1\|8S, 3JCT\|1\|1+3JCT\|1\|2, 4U3M\|1\|1+4U3M\|1\|4, 4U3M\|1\|5+4U3M\|1\|8, 4U3N\|1\|1+4U3N\|1\|4, 4U3N\|1\|5+4U3N\|1\|8, 4U3U\|1\|1+4U3U\|1\|4, 4U3U\|1\|5+4U3U\|1\|8, 4U4N\|1\|1+4U4N\|1\|4, 4U4N\|1\|5+4U4N\|1\|8, 4U4O\|1\|1+4U4O\|1\|4, 4U4O\|1\|5+4U4O\|1\|8, 4U4Q\|1\|1+4U4Q\|1\|4, 4U4Q\|1\|5+4U4Q\|1\|8, 4U4R\|1\|1+4U4R\|1\|4, 4U4R\|1\|5+4U4R\|1\|8, 4U4U\|1\|1+4U4U\|1\|4, 4U4U\|1\|5+4U4U\|1\|8, 4U4Y\|1\|1+4U4Y\|1\|4, 4U4Y\|1\|5+4U4Y\|1\|8, 4U4Z\|1\|1+4U4Z\|1\|4, 4U4Z\|1\|5+4U4Z\|1\|8, 4U50\|1\|1+4U50\|1\|4, 4U50\|1\|5+4U50\|1\|8, 4U51\|1\|1+4U51\|1\|4, 4U51\|1\|5+4U51\|1\|8, 4U52\|1\|1+4U52\|1\|4, 4U52\|1\|5+4U52\|1\|8, 4U53\|1\|1+4U53\|1\|4, 4U53\|1\|5+4U53\|1\|8, 4U55\|1\|1+4U55\|1\|4, 4U55\|1\|5+4U55\|1\|8, 4U56\|1\|1+4U56\|1\|4, 4U56\|1\|5+4U56\|1\|8, 4U6F\|1\|1+4U6F\|1\|4, 4U6F\|1\|5+4U6F\|1\|8, 4V6I\|1\|DA+4V6I\|1\|DB, 4V7F\|1\|1, 4V7R\|1\|B1+4V7R\|1\|B3, 4V7R\|1\|D1+4V7R\|1\|D3, 4V88\|1\|A1+4V88\|1\|A4, 4V88\|1\|A5+4V88\|1\|A8, 4V8T\|1\|5+4V8T\|1\|8, 4V8Y\|1\|B5+4V8Y\|1\|B8, 4V8Z\|1\|B5+4V8Z\|1\|B8, 5APN\|1\|5+5APN\|1\|8, 5APO\|1\|5+5APO\|1\|8, 5DAT\|1\|1+5DAT\|1\|4, 5DAT\|1\|5+5DAT\|1\|8, 5DC3\|1\|1+5DC3\|1\|4, 5DC3\|1\|5+5DC3\|1\|8, 5DGE\|1\|1+5DGE\|1\|4, 5DGE\|1\|5+5DGE\|1\|8, 5DGF\|1\|1+5DGF\|1\|4, 5DGF\|1\|5+5DGF\|1\|8, 5DGV\|1\|1+5DGV\|1\|4, 5DGV\|1\|5+5DGV\|1\|8, 5FL8\|1\|x, 5GAK\|1\|1+5GAK\|1\|4, 5H4P\|1\|1+5H4P\|1\|4, 5I4L\|1\|1+5I4L\|1\|4, 5I4L\|1\|5+5I4L\|1\|8, 5JCS\|1\|x, 5JUO\|1\|B+5JUO\|1\|C, 5JUP\|1\|B+5JUP\|1\|C, 5JUS\|1\|B+5JUS\|1\|C, 5JUT\|1\|B+5JUT\|1\|C, 5JUU\|1\|B+5JUU\|1\|C, 5LYB\|1\|1+5LYB\|1\|4, 5LYB\|1\|5+5LYB\|1\|8, 5M1J\|1\|14+5M1J\|1\|44, 5MC6\|1\|BQ+5MC6\|1\|BS, 5MEI\|1\|1+5MEI\|1\|4, 5MEI\|1\|AR+5MEI\|1\|AT, 5NDG\|1\|1+5NDG\|1\|4, 5NDG\|1\|5+5NDG\|1\|8, 5NDV\|1\|1+5NDV\|1\|4, 5NDV\|1\|5+5NDV\|1\|8, 5NDW\|1\|1+5NDW\|1\|4, 5NDW\|1\|5+5NDW\|1\|8, 5OBM\|1\|1+5OBM\|1\|4, 5OBM\|1\|5+5OBM\|1\|8, 5ON6\|1\|1+5ON6\|1\|4, 5ON6\|1\|AR+5ON6\|1\|AT, 5T62\|1\|A+5T62\|1\|C, 5T6R\|1\|A+5T6R\|1\|C, 5TBW\|1\|1+5TBW\|1\|4, 5TBW\|1\|AR+5TBW\|1\|AT, 5TGA\|1\|1+5TGA\|1\|4, 5TGA\|1\|5+5TGA\|1\|8, 5TGM\|1\|1+5TGM\|1\|4, 5TGM\|1\|5+5TGM\|1\|8, 5Z3G\|1\|A+5Z3G\|1\|B, 6C0F\|1\|1+6C0F\|1\|2, 6CB1\|1\|1+6CB1\|1\|2, 6ELZ\|1\|1+6ELZ\|1\|2, 6EM1\|1\|1+6EM1\|1\|2, 6FT6\|1\|1+6FT6\|1\|2, 6GQ1\|1\|1+6GQ1\|1\|4, 6GQB\|1\|1+6GQB\|1\|4, 6GQV\|1\|1+6GQV\|1\|4, 6HD7\|1\|1+6HD7\|1\|4, 6HHQ\|1\|1+6HHQ\|1\|4, 6HHQ\|1\|AR+6HHQ\|1\|AT, 6I7O\|1\|BQ, 6I7O\|1\|YQ	(0)	(7) 6N8J\|1\|1+6N8J\|1\|3, 6N8K\|1\|1+6N8K\|1\|3, 6N8L\|1\|1+6N8L\|1\|3, 6N8M\|1\|A+6N8M\|1\|C, 6N8N\|1\|A+6N8N\|1\|C, 6N8O\|1\|A+6N8O\|1\|C, 6Q8Y\|1\|BQ+6Q8Y\|1\|BS

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	4V6I\|1\|DA+ 4V6I\|1\|DB	Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome	ELECTRON MICROSCOPY	8.8	3511
2	5JUT\|1\|B+ 5JUT\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	3467
3	5JUU\|1\|B+ 5JUU\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	3465
4	5JUP\|1\|B+ 5JUP\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	3467
5	5JUS\|1\|B+ 5JUS\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure III (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	4.2	3467
6	5JUO\|1\|B+ 5JUO\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	3467
7	4V8Y\|1\|B5+ 4V8Y\|1\|B8	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	ELECTRON MICROSCOPY	4.3	3305
8	4V8Z\|1\|B5+ 4V8Z\|1\|B8	Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex	ELECTRON MICROSCOPY	6.6	3305
9	5NDV\|1\|5+ 5NDV\|1\|8	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3245
10	5DC3\|1\|5+ 5DC3\|1\|8	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	3327
11	5DAT\|1\|5+ 5DAT\|1\|8	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	3327
12	5DGF\|1\|5+ 5DGF\|1\|8	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	3327
13	5TGM\|1\|5+ 5TGM\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	3308
14	5TGA\|1\|5+ 5TGA\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	3308
15	5I4L\|1\|5+ 5I4L\|1\|8	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
16	4U56\|1\|5+ 4U56\|1\|8	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	3308
17	4U4Y\|1\|5+ 4U4Y\|1\|8	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
18	4U3N\|1\|5+ 4U3N\|1\|8	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
19	4U3U\|1\|5+ 4U3U\|1\|8	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	3308
20	4U4R\|1\|5+ 4U4R\|1\|8	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	3308
21	4V8T\|1\|5+ 4V8T\|1\|8	Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1	ELECTRON MICROSCOPY	8.1	3308
22	4V88\|1\|A5+ 4V88\|1\|A8	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	3308
23	5LYB\|1\|5+ 5LYB\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3308
24	4U4N\|1\|5+ 4U4N\|1\|8	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
25	4U55\|1\|5+ 4U55\|1\|8	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
26	4U4Z\|1\|5+ 4U4Z\|1\|8	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
27	4U50\|1\|5+ 4U50\|1\|8	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
28	4U53\|1\|5+ 4U53\|1\|8	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3308
29	4U4U\|1\|5+ 4U4U\|1\|8	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
30	4U4Q\|1\|5+ 4U4Q\|1\|8	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
31	4U51\|1\|5+ 4U51\|1\|8	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3308
32	4U3M\|1\|5+ 4U3M\|1\|8	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
33	4U52\|1\|5+ 4U52\|1\|8	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3308
34	4U6F\|1\|5+ 4U6F\|1\|8	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3308
35	5DGV\|1\|5+ 5DGV\|1\|8	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	3307
36	5DGE\|1\|5+ 5DGE\|1\|8	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	3308
37	4U4O\|1\|5+ 4U4O\|1\|8	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	3308
38	5OBM\|1\|5+ 5OBM\|1\|8	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	3292
39	5MEI\|1\|AR+ 5MEI\|1\|AT	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	3307
40	5ON6\|1\|AR+ 5ON6\|1\|AT	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	3307
41	6HHQ\|1\|AR+ 6HHQ\|1\|AT	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3305
42	5TBW\|1\|AR+ 5TBW\|1\|AT	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
43	6I7O\|1\|BQ	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	ELECTRON MICROSCOPY	5.3	3127
44	6I7O\|1\|YQ	The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.	ELECTRON MICROSCOPY	5.3	3127
45	5NDG\|1\|5+ 5NDG\|1\|8	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3284
46	5NDW\|1\|5+ 5NDW\|1\|8	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3238
47	3J6Y\|1\|2S+ 3J6Y\|1\|8S	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)	ELECTRON MICROSCOPY	6.1	3466
48	3J6X\|1\|2S+ 3J6X\|1\|8S	S. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)	ELECTRON MICROSCOPY	6.1	3466
49	5APO\|1\|5+ 5APO\|1\|8	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	ELECTRON MICROSCOPY	3.41	3270
50	5APN\|1\|5+ 5APN\|1\|8	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	ELECTRON MICROSCOPY	3.91	3270
51	3J78\|1\|2S+ 3J78\|1\|8S	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)	ELECTRON MICROSCOPY	6.3	3460
52	3J77\|1\|2S+ 3J77\|1\|8S	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)	ELECTRON MICROSCOPY	6.2	3445
53	6GQV\|1\|1+ 6GQV\|1\|4	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	3381
54	6GQB\|1\|1+ 6GQB\|1\|4	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	3381
55	6GQ1\|1\|1+ 6GQ1\|1\|4	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)	ELECTRON MICROSCOPY	4.4	3381
56	5NDW\|1\|1+ 5NDW\|1\|4	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3248
57	5NDG\|1\|1+ 5NDG\|1\|4	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3236
58	4U4O\|1\|1+ 4U4O\|1\|4	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	3307
59	4U56\|1\|1+ 4U56\|1\|4	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	3307
60	4U4Y\|1\|1+ 4U4Y\|1\|4	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
61	4U3M\|1\|1+ 4U3M\|1\|4	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
62	4U6F\|1\|1+ 4U6F\|1\|4	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
63	5LYB\|1\|1+ 5LYB\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3307
64	4V88\|1\|A1+ 4V88\|1\|A4	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	3307
65	4U4R\|1\|1+ 4U4R\|1\|4	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	3307
66	4U3U\|1\|1+ 4U3U\|1\|4	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	3307
67	4U3N\|1\|1+ 4U3N\|1\|4	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
68	4U4Z\|1\|1+ 4U4Z\|1\|4	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
69	4U55\|1\|1+ 4U55\|1\|4	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
70	4U51\|1\|1+ 4U51\|1\|4	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
71	4U4Q\|1\|1+ 4U4Q\|1\|4	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
72	4U4U\|1\|1+ 4U4U\|1\|4	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
73	4U4N\|1\|1+ 4U4N\|1\|4	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
74	5I4L\|1\|1+ 5I4L\|1\|4	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
75	5TGA\|1\|1+ 5TGA\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	3307
76	4U50\|1\|1+ 4U50\|1\|4	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3307
77	4U53\|1\|1+ 4U53\|1\|4	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3307
78	4U52\|1\|1+ 4U52\|1\|4	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
79	5ON6\|1\|1+ 5ON6\|1\|4	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	3307
80	5MEI\|1\|1+ 5MEI\|1\|4	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	3307
81	6HHQ\|1\|1+ 6HHQ\|1\|4	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3307
82	5TBW\|1\|1+ 5TBW\|1\|4	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3307
83	5DC3\|1\|1+ 5DC3\|1\|4	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	3307
84	5DGE\|1\|1+ 5DGE\|1\|4	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	3307
85	5DGV\|1\|1+ 5DGV\|1\|4	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	3306
86	5TGM\|1\|1+ 5TGM\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	3307
87	5DGF\|1\|1+ 5DGF\|1\|4	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	3307
88	5DAT\|1\|1+ 5DAT\|1\|4	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	3307
89	5OBM\|1\|1+ 5OBM\|1\|4	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	3256
90	5M1J\|1\|14+ 5M1J\|1\|44	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	3453
91	5NDV\|1\|1+ 5NDV\|1\|4	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3235
92	5MC6\|1\|BQ+ 5MC6\|1\|BS	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	3323
93	5GAK\|1\|1+ 5GAK\|1\|4	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	ELECTRON MICROSCOPY	3.88	3323
94	6HD7\|1\|1+ 6HD7\|1\|4	Cryo-EM structure of the ribosome-NatA complex	ELECTRON MICROSCOPY	3.4	3493
95	5H4P\|1\|1+ 5H4P\|1\|4	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	ELECTRON MICROSCOPY	3.07	3249
96	5T6R\|1\|A+ 5T6R\|1\|C	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3 Complex	ELECTRON MICROSCOPY	4.2	3362
97	5T62\|1\|A+ 5T62\|1\|C	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	ELECTRON MICROSCOPY	3.1	3362
98	4V7R\|1\|B1+ 4V7R\|1\|B3	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	3364
99	4V7R\|1\|D1+ 4V7R\|1\|D3	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	3364
100	6FT6\|1\|1+ 6FT6\|1\|2	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	ELECTRON MICROSCOPY	3.9	3220
101	3JCT\|1\|1+ 3JCT\|1\|2	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	ELECTRON MICROSCOPY	3.08	3216
102	6EM1\|1\|1+ 6EM1\|1\|2	State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	ELECTRON MICROSCOPY	3.6	1943
103	6ELZ\|1\|1+ 6ELZ\|1\|2	State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes	ELECTRON MICROSCOPY	3.3	2615
104	5Z3G\|1\|A+ 5Z3G\|1\|B	Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)	ELECTRON MICROSCOPY	3.65	1657
105	6CB1\|1\|1+ 6CB1\|1\|2	Yeast nucleolar pre-60S ribosomal subunit (state 3)	ELECTRON MICROSCOPY	4.6	1528
106	6C0F\|1\|1+ 6C0F\|1\|2	Yeast nucleolar pre-60S ribosomal subunit (state 2)	ELECTRON MICROSCOPY	3.7	1515
107	5FL8\|1\|x	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE	ELECTRON MICROSCOPY	9.5	2779
108	5JCS\|1\|x	CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE	ELECTRON MICROSCOPY	9.5	3394
109	4V7F\|1\|1	Arx1 pre-60S particle.	ELECTRON MICROSCOPY	8.7	3394

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_20.0_90506.27 Obsolete

Release history

Parents

Children