Equivalence class NR_20.0_93192.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6GSK|1|3L (rep) | Transfer RNA | tRNAThr | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site | X-ray diffraction | 3.36 | 2018-07-04 |
| 2 | 6GSK|1|3K | Transfer RNA | tRNAThr | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site | X-ray diffraction | 3.36 | 2018-07-04 |
| 3 | 6GSJ|1|3L | Transfer RNA | tRNAThr | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site | X-ray diffraction | 2.96 | 2018-07-04 |
| 4 | 6GSJ|1|3K | Transfer RNA | tRNAThr | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site | X-ray diffraction | 2.96 | 2018-07-04 |
| 5 | 5L3P|1|y | Transfer RNA | deacylated A/R-tRNA | Escherichia coli | Bacteria | RF00005 | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | Electron microscopy | 3.7 | 2016-07-20 |
Release history
| Release | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-07 | 2018-12-14 | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_20.0_93192.1 | NR_20.0_20734.1 | 3.59 | (1) 6GSJ|1|3K | (4) 5L3P|1|y, 6GSK|1|3K, 6GSJ|1|3L, 6GSK|1|3L | (0) |
| NR_20.0_93192.1 | NR_20.0_21767.1 | 3.59 | (1) 6GSK|1|3L | (4) 5L3P|1|y, 6GSJ|1|3L, 6GSJ|1|3K, 6GSK|1|3K | (0) |
| NR_20.0_93192.1 | NR_20.0_34846.1 | 3.59 | (1) 5L3P|1|y | (4) 6GSJ|1|3L, 6GSK|1|3L, 6GSJ|1|3K, 6GSK|1|3K | (0) |
| NR_20.0_93192.1 | NR_20.0_40647.1 | 3.59 | (1) 6GSJ|1|3L | (4) 6GSJ|1|3K, 6GSK|1|3L, 5L3P|1|y, 6GSK|1|3K | (0) |
| NR_20.0_93192.1 | NR_20.0_60251.1 | 3.59 | (1) 6GSK|1|3K | (4) 5L3P|1|y, 6GSJ|1|3L, 6GSJ|1|3K, 6GSK|1|3L | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6GSK|1|3L | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site | X-RAY DIFFRACTION | 3.36 | 72 |
| 2 | 6GSJ|1|3L | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site | X-RAY DIFFRACTION | 2.96 | 70 |
| 3 | 6GSJ|1|3K | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site | X-RAY DIFFRACTION | 2.96 | 72 |
| 4 | 6GSK|1|3K | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-site | X-RAY DIFFRACTION | 3.36 | 72 |
| 5 | 5L3P|1|y | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | ELECTRON MICROSCOPY | 3.7 | 66 |