Equivalence class NR_20.0_98632.6 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7P7Q|1|A (rep) | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume | Electron microscopy | 2.4 | 2022-02-23 |
| 2 | 7NHK|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis | Electron microscopy | 2.9 | 2021-05-05 |
| 3 | 7P7R|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis V583 | Bacteria | RF02541 | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I | Electron microscopy | 2.9 | 2022-03-23 |
| 4 | 7P7T|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III | Electron microscopy | 2.9 | 2022-02-23 |
| 5 | 7P7S|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II | Electron microscopy | 3 | 2022-02-23 |
| 6 | 6W6P|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | MultiBody Refinement of 70S Ribosome from Enterococcus faecalis | Electron microscopy | 2.9 | 2020-10-14 |
| 7 | 6WU9|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis OG1RF | Bacteria | RF02541 | 50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinement | Electron microscopy | 2.9 | 2020-11-04 |
| 8 | 7P7U|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | E. faecalis 70S ribosome with P-tRNA, state IV | Electron microscopy | 3.1 | 2022-02-23 |
| 9 | 6O90|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05 | Electron microscopy | 3.49 | 2020-09-23 |
| 10 | 6O8Z|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04 | Electron microscopy | 3.49 | 2020-09-16 |
| 11 | 6O8W|1|A | Large subunit ribosomal RNA | 50S subunit | Enterococcus faecalis | Bacteria | RF02541 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01 | Electron microscopy | 3.53 | 2020-09-23 |
| 12 | 6O8X|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02 | Electron microscopy | 3.68 | 2020-09-23 |
| 13 | 6O8Y|1|A | Large subunit ribosomal RNA | 23S rRNA | Enterococcus faecalis | Bacteria | RF02541 | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03 | Electron microscopy | 4.14 | 2020-09-23 |
Release history
| Release | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 | 3.333 | 3.334 | 3.335 | 3.336 | 3.337 | 3.338 | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 | 3.346 | 3.347 | 3.348 | 3.349 | 3.350 | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 |
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| Date | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 | 2024-05-01 | 2024-05-08 | 2024-05-15 | 2024-05-22 | 2024-05-29 | 2024-06-05 | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 | 2024-07-31 | 2024-08-07 | 2024-08-14 | 2024-08-21 | 2024-08-28 | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 7P7Q|1|A | E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume | ELECTRON MICROSCOPY | 2.4 | 2897 | |
| 2 | 7P7T|1|A | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state III | ELECTRON MICROSCOPY | 2.9 | 2901 | |
| 3 | 7P7S|1|A | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state II | ELECTRON MICROSCOPY | 3 | 2901 | |
| 4 | 7P7R|1|A | PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I | ELECTRON MICROSCOPY | 2.9 | 2901 | |
| 5 | 7P7U|1|A | E. faecalis 70S ribosome with P-tRNA, state IV | ELECTRON MICROSCOPY | 3.1 | 2824 | |
| 6 | 7NHK|1|A | LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis | ELECTRON MICROSCOPY | 2.9 | 2905 | |
| 7 | 6O8Y|1|A | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03 | ELECTRON MICROSCOPY | 4.14 | 2897 | |
| 8 | 6O8X|1|A | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02 | ELECTRON MICROSCOPY | 3.68 | 2898 | |
| 9 | 6O90|1|A | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05 | ELECTRON MICROSCOPY | 3.49 | 2903 | |
| 10 | 6W6P|1|A | MultiBody Refinement of 70S Ribosome from Enterococcus faecalis | ELECTRON MICROSCOPY | 2.9 | 2739 | |
| 11 | 6WU9|1|A | 50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinement | ELECTRON MICROSCOPY | 2.9 | 2739 | |
| 12 | 6O8Z|1|A | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04 | ELECTRON MICROSCOPY | 3.49 | 2903 | |
| 13 | 6O8W|1|A | Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01 | ELECTRON MICROSCOPY | 3.53 | 2903 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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