#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17P6Z|1|7 (rep)Transfer RNAtRNA-Phe, mRNAMycoplasma pneumoniae M129BacteriaRF00005Mycoplasma pneumoniae 70S ribosome in untreated cellsElectron microscopy3.52022-05-25
27PAL|1|6Transfer RNAtRNA-Phe, mRNAMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy4.72022-05-25
37PIB|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy4.72022-05-25
47PAL|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy4.72022-05-25
57PIB|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy4.72022-05-25
67PHB|1|6Transfer RNAtRNA-Phe, mRNAMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy4.92022-05-25
77PHB|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy4.92022-05-25
87PAK|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy5.32022-05-25
97PAK|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy5.32022-05-25
107PIT|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy5.72022-05-25
117PIT|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy5.72022-05-25
127PI9|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy6.32022-05-25
137PI9|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy6.32022-05-25
147PAI|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in Mycoplasma pneumoniae cellsElectron microscopy6.72022-05-25
157PAM|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy6.82022-05-25
167PAM|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy6.82022-05-25
177PAO|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy72022-05-25
187PAO|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy72022-05-25
197PAJ|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.32022-05-25
207PAJ|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.32022-05-25
217PAJ|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy7.32022-05-25
227PAR|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.22022-05-25
237PAR|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.22022-05-25
247PHA|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.52022-05-25
257PHA|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.52022-05-25
267PH9|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsElectron microscopy8.72022-05-25
277PAQ|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.92022-05-25
287PAQ|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy8.92022-05-25
297PI8|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy8.92022-05-25
307PIC|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.12022-05-25
317PIP|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.32022-05-25
327PIP|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.32022-05-25
337PAH|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.52022-05-25
347PIO|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.52022-05-25
357PAH|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.52022-05-25
367PIQ|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.72022-05-25
377PIQ|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy9.72022-05-25
387PAN|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.72022-05-25
397PAN|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsElectron microscopy9.72022-05-25
407PIR|1|6Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy12.12022-05-25
417PIR|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsElectron microscopy12.12022-05-25
427PIA|1|7Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy13.62022-05-25
437PIA|1|8Transfer RNAtRNA-PheMycoplasma pneumoniae M129BacteriaRF0000570S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsElectron microscopy13.62022-05-25

Release history

Release3.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.337
Date2022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-29

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17PAK|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.376
27PAK|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.376
37PAJ|1|870S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.376
47PAJ|1|670S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.376
57PAJ|1|770S ribosome with EF-Tu-tRNA, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY7.376
67PAL|1|670S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
77PAL|1|770S ribosome with A- and P-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
87PHB|1|770S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.976
97PHB|1|670S ribosome with A- and P-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.976
107PAR|1|870S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.276
117PAR|1|770S ribosome with EF-G, P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.276
127PH9|1|770S ribosome with P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.776
137PAI|1|770S ribosome with P-site tRNA in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.776
147PHA|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.576
157PAH|1|770S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.576
167PAH|1|870S ribosome with P- and E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.576
177PIO|1|770S ribosome with P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.576
187P6Z|1|7Mycoplasma pneumoniae 70S ribosome in untreated cellsELECTRON MICROSCOPY3.576
197PI8|1|770S ribosome with P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.976
207PI9|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.376
217PI9|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.376
227PIQ|1|770S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
237PIQ|1|670S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
247PHA|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in chloramphenicol-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.576
257PIP|1|770S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.376
267PIP|1|670S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.376
277PIC|1|870S ribosome with P/E-site tRNA in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.176
287PIA|1|770S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY13.676
297PIA|1|870S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY13.676
307PAN|1|870S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
317PAN|1|770S ribosome with A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY9.776
327PAQ|1|870S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.976
337PAQ|1|770S ribosome with EF-G, A/P- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY8.976
347PIB|1|770S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
357PIB|1|870S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY4.776
367PIT|1|770S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.776
377PIT|1|870S ribosome with EF-G, A/P- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY5.776
387PAO|1|670S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY776
397PAO|1|870S ribosome with EF-G, A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY776
407PAM|1|670S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.876
417PAM|1|870S ribosome with A*- and P/E-site tRNAs in Mycoplasma pneumoniae cellsELECTRON MICROSCOPY6.876
427PIR|1|870S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY12.176
437PIR|1|670S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cellsELECTRON MICROSCOPY12.176
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