Equivalence class NR_3.0_10255.19 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7O7Y|1|B7 (rep) | 5S ribosomal RNA | 5S rRNA | Oryctolagus cuniculus | Eukarya | RF00001 | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution) | Electron microscopy | 2.2 | 2021-06-02 |
| 2 | 7O7Z|1|B7 | 5S ribosomal RNA | 5S | Oryctolagus cuniculus | Eukarya | RF00001 | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot) | Electron microscopy | 2.4 | 2021-06-02 |
| 3 | 7OBR|1|7 | 5S ribosomal RNA | 5S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF00001 | RNC-SRP early complex | Electron microscopy | 2.8 | 2021-07-21 |
| 4 | 6SGC|1|74 | 5S ribosomal RNA | 5S ribosomal RNA | Oryctolagus cuniculus | Eukarya | RF00001 | Rabbit 80S ribosome stalled on a poly(A) tail | Electron microscopy | 2.8 | 2019-12-04 |
| 5 | 7O80|1|B7 | 5S ribosomal RNA | 5S rRNA | Oryctolagus cuniculus | Eukarya | RF00001 | Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site | Electron microscopy | 2.9 | 2021-06-02 |
| 6 | 6R5Q|1|7 | 5S ribosomal RNA | 5S rRNA | Oryctolagus cuniculus | Eukarya | RF00001 | Structure of XBP1u-paused ribosome nascent chain complex (post-state) | Electron microscopy | 3 | 2019-07-10 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7O80|1|B7 | Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site | ELECTRON MICROSCOPY | 2.9 | 119 |
| 2 | 7O7Y|1|B7 | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution) | ELECTRON MICROSCOPY | 2.2 | 119 |
| 3 | 7O7Z|1|B7 | Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot) | ELECTRON MICROSCOPY | 2.4 | 119 |
| 4 | 6SGC|1|74 | Rabbit 80S ribosome stalled on a poly(A) tail | ELECTRON MICROSCOPY | 2.8 | 119 |
| 5 | 6R5Q|1|7 | Structure of XBP1u-paused ribosome nascent chain complex (post-state) | ELECTRON MICROSCOPY | 3 | 120 |
| 6 | 7OBR|1|7 | RNC-SRP early complex | ELECTRON MICROSCOPY | 2.8 | 120 |