RNA 3D Hub //

Equivalence class NR_3.0_12763.18 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17OF0|1|A (rep)Large subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).Electron microscopy2.22021-06-09
26ZM6|1|ALarge subunit ribosomal RNA16S mitochondrial rRNAHomo sapiensMitochondriaRF02541Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAElectron microscopy2.592021-01-13
37O9M|1|ALarge subunit ribosomal RNA16S rRNAHomo sapiensMitochondriaRF02541Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleElectron microscopy2.52021-06-30
47OF6|1|ALarge subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).Electron microscopy2.62021-06-09
57OF4|1|ALarge subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).Electron microscopy2.72021-06-09
66ZM5|1|ALarge subunit ribosomal RNA16S mitochondrial rRNAHomo sapiensMitochondriaRF02541Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideElectron microscopy2.892021-01-13
77OF7|1|ALarge subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).Electron microscopy2.52021-06-23
86VMI|1|ALarge subunit ribosomal RNA16s rRNAHomo sapiensMitochondriaRF02541Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)Electron microscopy2.962020-08-05
96VLZ|1|ALarge subunit ribosomal RNA16s rRNAHomo sapiensMitochondriaRF02541Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)Electron microscopy2.972020-08-05
107OF2|1|ALarge subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.Electron microscopy2.72021-06-02
117OF3|1|ALarge subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).Electron microscopy2.72021-05-19
127ODR|1|ALarge subunit ribosomal RNA16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNAHomo sapiensMitochondriaRF02541State A of the human mitoribosomal large subunit assembly intermediateElectron microscopy2.92021-06-23
137OF5|1|ALarge subunit ribosomal RNA16S ribosomal RNAHomo sapiensMitochondriaRF02541Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).Electron microscopy2.92021-06-09

Release history

Release3.2003.2013.2023.2033.204
Date2021-10-132021-10-202021-10-272021-11-032021-11-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_12763.18NR_3.0_12763.173.200(13) 6VLZ|1|A, 7OF6|1|A, 7OF5|1|A, 7OF4|1|A, 7OF3|1|A, 7OF2|1|A, 7OF0|1|A, 7ODR|1|A, 7O9M|1|A, 6ZM6|1|A, 6ZM5|1|A, 6VMI|1|A, 7OF7|1|A(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_12763.18NR_3.0_12763.193.205(13) 6VLZ|1|A, 7OF6|1|A, 7OF5|1|A, 7OF4|1|A, 7OF3|1|A, 7OF2|1|A, 7OF0|1|A, 7ODR|1|A, 7O9M|1|A, 6ZM6|1|A, 6ZM5|1|A, 6VMI|1|A, 7OF7|1|A(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16VMI|1|AStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.961527
26VLZ|1|AStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.971527
36ZM6|1|AHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.591531
46ZM5|1|AHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.891534
57OF6|1|AStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.61460
67OF4|1|AStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.71460
77OF2|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.71407
87OF5|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.91386
97OF7|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.51373
107OF0|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.21376
117OF3|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.71386
127ODR|1|AState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.91417
137O9M|1|AHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.51453
Copyright 2023 BGSU RNA group. Page generated in 0.1539 s