Equivalence class NR_3.0_14145.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4WRT|1|V+ 4WRT|1|R (rep) | Influenza virus polymerase vRNA promoter 5' end, Influenza virus polymerase vRNA promoter 3' end | Influenza B virus | Crystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2) | X-ray diffraction | 2.7 | 2014-11-19 | |||
| 2 | 6QCW|1|V+ 6QCW|1|R+ 6QCW|1|M | RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*CP*UP*GP*CP*UP*AP*UP*U)-3'), RNA (5'-D(*(GDM))-R(P*GP*AP*AP*UP*GP*CP*CP*AP*UP*AP*AP*UP*AP*G)-3') | synthetic construct | Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer | X-ray diffraction | 2.88 | 2019-06-05 | |||
| 3 | 7R0E|1|V+ 7R0E|1|R+ 7R0E|1|M | 5' vRNA, 3' vRNA, mRNA | Influenza A virus | Early transcription elongation state of influenza A/H7N9 polymerase backtracked due to double incoproation of nucleotide analogue T1106 and with singly incoporated T1106 at the +1 position | Electron microscopy | 2.51 | 2022-12-28 | |||
| 4 | 6T0N|1|V+ 6T0N|1|R | 5' vRNA, 3' vRNA | Influenza B virus | Bat Influenza A polymerase pre-initiation complex | Electron microscopy | 2.54 | 2020-04-15 | |||
| 5 | 6SZV|1|V | 5' vRNA | Influenza B virus | Bat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only) | Electron microscopy | 2.5 | 2020-04-15 | |||
| 6 | 8BEK|1|V+ 8BEK|1|R+ 8BEK|1|M | 5' vRNA, 3' vRNA, mRNA | Influenza A virus | Early transcription elongation state of influenza A/H7N9 backtracked polymerase with singly incoporated T1106 at the U +1 position | Electron microscopy | 2.86 | 2022-12-28 | |||
| 7 | 7QTL|1|V | 5' vRNA | Influenza A virus | Influenza A/H7N9 polymerase elongation complex | Electron microscopy | 2.48 | 2022-12-28 | |||
| 8 | 7R1F|1|V | 5' vRNA | Influenza B virus | Early transcription elongation state of influenza B polymerase backtracked due to double incoproation of nucleotide analogue T1106 | Electron microscopy | 2.58 | 2022-12-28 |
Release history
| Release | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.0_14145.1 | NR_3.0_36180.1 | 3.263 | (1) 6SZV|1|V | (7) 8BEK|1|V+8BEK|1|R+8BEK|1|M, 7R1F|1|V, 7R0E|1|V+7R0E|1|R+7R0E|1|M, 7QTL|1|V, 6T0N|1|V+6T0N|1|R, 6QCW|1|V+6QCW|1|R+6QCW|1|M, 4WRT|1|V+4WRT|1|R | (0) |
| NR_3.0_14145.1 | NR_3.0_45043.4 | 3.263 | (3) 4WRT|1|V+4WRT|1|R, 6T0N|1|V+6T0N|1|R, 6QCW|1|V+6QCW|1|R+6QCW|1|M | (5) 7R1F|1|V, 7R0E|1|V+7R0E|1|R+7R0E|1|M, 7QTL|1|V, 6SZV|1|V, 8BEK|1|V+8BEK|1|R+8BEK|1|M | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6T0N|1|V+6T0N|1|R | Bat Influenza A polymerase pre-initiation complex | ELECTRON MICROSCOPY | 2.54 | 14 |
| 2 | 7R0E|1|V+7R0E|1|R+7R0E|1|M | Early transcription elongation state of influenza A/H7N9 polymerase backtracked due to double incoproation of nucleotide analogue T1106 and with singly incoporated T1106 at the +1 position | ELECTRON MICROSCOPY | 2.51 | 14 |
| 3 | 8BEK|1|V+8BEK|1|R+8BEK|1|M | Early transcription elongation state of influenza A/H7N9 backtracked polymerase with singly incoporated T1106 at the U +1 position | ELECTRON MICROSCOPY | 2.86 | 14 |
| 4 | 4WRT|1|V+4WRT|1|R | Crystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2) | X-RAY DIFFRACTION | 2.7 | 14 |
| 5 | 6QCW|1|V+6QCW|1|R+6QCW|1|M | Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer | X-RAY DIFFRACTION | 2.88 | 14 |
| 6 | 7QTL|1|V | Influenza A/H7N9 polymerase elongation complex | ELECTRON MICROSCOPY | 2.48 | 13 |
| 7 | 7R1F|1|V | Early transcription elongation state of influenza B polymerase backtracked due to double incoproation of nucleotide analogue T1106 | ELECTRON MICROSCOPY | 2.58 | 12 |
| 8 | 6SZV|1|V | Bat Influenza A polymerase elongation complex with incoming UTP analogue (core + endonuclease only) | ELECTRON MICROSCOPY | 2.5 | 14 |