Equivalence class NR_3.0_20721.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5J8B|1|x (rep) | Transfer RNA | P-site tRNA, mRNA | Thermus thermophilus | Bacteria | RF00005 | Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.6 | 2016-05-25 |
| 2 | 5E81|1|2K | Transfer RNA | tRNA-fMet, mRNA | Thermus thermophilus | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 2016-01-27 |
| 3 | 5E81|1|2L | Transfer RNA | tRNA-fMet, mRNA | Thermus thermophilus | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 2016-01-27 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.0_20721.5 | NR_all_20721.4 | 2.77 | (2) 5E81|1|2K, 5E81|1|2L | (1) 5J8B|1|x | (35) 4V7K|1|Av, 4V7J|1|Aw, 4V8X|1|CW, 4V8X|1|AV, 4V9N|1|AW, 4V9B|1|AD, 3J9Z|1|S6, 4V68|1|AV, 4V5A|1|CW, 4V8U|1|AW, 4V7K|1|Aw, 4V9A|1|CC, 4V95|1|AV, 3JA1|1|S2, 4V9N|1|CW, 4V4J|1|z, 4V7J|1|Bw, 4V7J|1|Av, 4V8X|1|CV, 4V8U|1|CW, 4V9B|1|CD, 4V9B|1|AC, 4V5N|1|AV, 4V5A|1|AW, 4V7K|1|Bw, 4V9A|1|AC, 4L47|1|XV, 4V7J|1|Bv, 4V8X|1|AW, 4V9B|1|CC, 4V5M|1|AV, 4V7K|1|Bv, 4V95|1|CV, 4WT8|1|C4, 4L47|1|QV |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.0_20721.5 | NR_3.0_20721.6 | 2.96 | (3) 5E81|1|2K, 5E81|1|2L, 5J8B|1|x | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5E81|1|2L | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 72 |
| 2 | 5E81|1|2K | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 72 |
| 3 | 5J8B|1|x | Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.6 | 73 |