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Equivalence class NR_3.0_21280.18 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17O7Y|1|A2 (rep)Small subunit ribosomal RNA18S rRNAOryctolagus cuniculusEukaryaRF01960Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)Electron microscopy2.22021-06-02
27O7Z|1|A2Small subunit ribosomal RNA18S rRNAOryctolagus cuniculusEukaryaRF01960Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)Electron microscopy2.42021-06-02
37JQB|1|ASmall subunit ribosomal RNArRNAOryctolagus cuniculusEukaryaRF01960SARS-CoV-2 Nsp1 and rabbit 40S ribosome complexElectron microscopy2.72020-12-02
46SGC|1|A1Small subunit ribosomal RNA18S ribosomal RNAOryctolagus cuniculusEukaryaRF01960Rabbit 80S ribosome stalled on a poly(A) tailElectron microscopy2.82019-12-04
57O80|1|A2Small subunit ribosomal RNA18S rRNAOryctolagus cuniculusEukaryaRF01960Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery siteElectron microscopy2.92021-06-02
66YAL|1|2Small subunit ribosomal RNA18S ribosomal RNAOryctolagus cuniculusEukaryaRF01960Mammalian 48S late-stage initiation complex with beta-globin mRNAElectron microscopy32020-04-08
76R5Q|1|KSmall subunit ribosomal RNA18S ribosomal RNAOryctolagus cuniculusEukaryaRF01960Structure of XBP1u-paused ribosome nascent chain complex (post-state)Electron microscopy32019-07-10

Release history

Release3.1863.1873.1883.1893.1903.1913.1923.193
Date2021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-25

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_21280.18NR_3.0_21280.173.186(7) 6R5Q|1|K, 6SGC|1|A1, 6YAL|1|2, 7JQB|1|A, 7O7Y|1|A2, 7O7Z|1|A2, 7O80|1|A2(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_21280.18NR_3.0_21280.193.194(7) 6R5Q|1|K, 6SGC|1|A1, 6YAL|1|2, 7JQB|1|A, 7O7Y|1|A2, 7O7Z|1|A2, 7O80|1|A2(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17O7Y|1|A2Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)ELECTRON MICROSCOPY2.21688
27O7Z|1|A2Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)ELECTRON MICROSCOPY2.41688
37O80|1|A2Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery siteELECTRON MICROSCOPY2.91688
46R5Q|1|KStructure of XBP1u-paused ribosome nascent chain complex (post-state)ELECTRON MICROSCOPY31698
56SGC|1|A1Rabbit 80S ribosome stalled on a poly(A) tailELECTRON MICROSCOPY2.81697
67JQB|1|ASARS-CoV-2 Nsp1 and rabbit 40S ribosome complexELECTRON MICROSCOPY2.71697
76YAL|1|2Mammalian 48S late-stage initiation complex with beta-globin mRNAELECTRON MICROSCOPY31743
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