NR_3.0_35542.94

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5L4O\|1\|A (rep)	Transfer RNA	tRNA (76-MER)	Escherichia coli	Bacteria	RF00005	Structure of an E.coli initiator tRNAfMet A1-U72 variant	X-ray diffraction	2.8	76	2017-03-01
2	5HCQ\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	76	2016-04-06
3	5IBB\|1\|2K	Transfer RNA	mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	77	2016-05-25
4	6CAE\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	76	2018-04-18
5	5HCQ\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	76	2016-04-06
6	7OSA\|1\|PSIT	Transfer RNA	MRNA, Psite tRNA-Phe	Escherichia coli	Bacteria	RF00005	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	77	2021-12-08
7	5IB7\|1\|2K	Transfer RNA	mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	77	2016-05-25
8	4V8D\|1\|CC	Transfer RNA	MRNA, TRNA-FMET	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	77	2014-07-09
9	7RQ8\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-ray diffraction	2.5	76	2021-10-13
10	5HCR\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	76	2016-04-06
11	4Z8C\|1\|1x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	76	2015-05-20
12	5J4B\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	76	2016-04-27
13	6XHY\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	76	2020-12-23
14	4WSD\|1\|2L	Transfer RNA	mRNA, tRNA-fMet	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	77	2015-06-10
15	4V8D\|1\|AC	Transfer RNA	MRNA, TRNA-FMET	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	77	2014-07-09
16	5IBB\|1\|2L	Transfer RNA	mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	76	2016-05-25
17	6XHY\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	76	2020-12-23
18	5J4B\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	76	2016-04-27
19	4Z8C\|1\|2x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	76	2015-05-20
20	4WSD\|1\|2K	Transfer RNA	mRNA, tRNA-fMet	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	77	2015-06-10
21	6CAE\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	76	2018-04-18
22	5J4C\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	76	2016-04-27
23	4WPO\|1\|BX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	76	2015-01-28
24	5W4K\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	76	2017-08-30
25	1VY4\|1\|AX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	76	2014-08-20
26	6OF1\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	76	2019-04-17
27	6XHW\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	76	2020-12-23
28	4W2H\|1\|AX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	76	2014-10-15
29	7RQ8\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-ray diffraction	2.5	76	2021-10-13
30	5HCR\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	76	2016-04-06
31	5HD1\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	76	2016-04-06
32	4LNT\|1\|XV	Transfer RNA	A-site ASL SufA6, messenger RNA, P-site tRNA fMet	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	77	2014-08-06
33	5HCP\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	76	2016-04-06
34	6OF1\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	76	2019-04-17
35	5HAU\|1\|1w	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	76	2016-04-06
36	5J4C\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	76	2016-04-27
37	4W2I\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	76	2014-10-15
38	6XHV\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	76	2020-12-23
39	5WIS\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	76	2018-02-14
40	5IB7\|1\|2L	Transfer RNA	mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	77	2016-05-25
41	4W2G\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	76	2014-10-15
42	6XQD\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-ray diffraction	2.8	76	2020-08-05
43	6ND5\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	76	2019-03-20
44	4LNT\|1\|QV	Transfer RNA	A-site ASL SufA6, messenger RNA, P-site tRNA fMet	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	77	2014-08-06
45	4W2H\|1\|CX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	76	2014-10-15
46	5W4K\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	76	2017-08-30
47	6XHW\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	76	2020-12-23
48	5HAU\|1\|2w	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	76	2016-04-06
49	6XQD\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-ray diffraction	2.8	76	2020-08-05
50	6XHV\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	76	2020-12-23
51	4Y4P\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	76	2015-03-18
52	4W2G\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	76	2014-10-15
53	6O97\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	76	2019-04-17
54	5HCP\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	76	2016-04-06
55	5DOY\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	76	2015-12-30
56	5WIT\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	76	2018-02-14
57	5HD1\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	76	2016-04-06
58	4W2I\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	76	2014-10-15
59	6ND5\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	76	2019-03-20
60	7RQ9\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-ray diffraction	2.6	76	2021-10-13
61	1VY7\|1\|AX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	76	2014-08-20
62	4Z3S\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	76	2015-06-03
63	1VY4\|1\|CX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	76	2014-08-20
64	4W2F\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	76	2014-10-15
65	1VY5\|1\|AX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	76	2014-08-20
66	4WPO\|1\|DX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	76	2015-01-28
67	4V51\|1\|CV	Transfer RNA	E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	77	2014-07-09
68	7JQL\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	76	2020-08-26
69	7JQL\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	76	2020-08-26
70	4V9R\|1\|AX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	76	2014-07-09
71	7RQ9\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-ray diffraction	2.6	76	2021-10-13
72	4V9R\|1\|CX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	76	2014-07-09
73	4W2F\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	76	2014-10-15
74	5WIS\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	76	2018-02-14
75	4V51\|1\|AV	Transfer RNA	E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	77	2014-07-09
76	6ND6\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	76	2019-02-20
77	6O97\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	76	2019-04-17
78	4Y4P\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	76	2015-03-18
79	1VY6\|1\|AX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	76	2014-08-20
80	4Z3S\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	76	2015-06-03
81	6UO1\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	76	2019-11-27
82	6UO1\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	76	2019-11-27
83	1VY6\|1\|CX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	76	2014-08-20
84	4WQY\|1\|BX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	76	2015-01-28
85	5DOY\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	76	2015-12-30
86	5WIT\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	76	2018-02-14
87	5F8K\|1\|1x	Transfer RNA	mRNA, tRNAiMet	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	76	2016-02-03
88	7OSM\|1\|PSIT	Transfer RNA	FMET tRNA, MRNA	Escherichia coli	Bacteria	RF00005	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	77	2021-12-08
89	6ND6\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	76	2019-02-20
90	1VY5\|1\|CX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	76	2014-08-20
91	4V8B\|1\|AC	Transfer RNA	MRNA, TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	77	2014-07-09
92	6XQE\|1\|1x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	76	2020-08-05
93	4V67\|1\|AY	Transfer RNA	MRNA, P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	77	2014-07-09
94	6XQE\|1\|2x	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	76	2020-08-05
95	4V7L\|1\|CX	Transfer RNA	RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3'), tRNA-Met	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	77	2014-07-09
96	4V8B\|1\|CC	Transfer RNA	MRNA, TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	77	2014-07-09
97	4V7L\|1\|AX	Transfer RNA	RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3'), tRNA-Met	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	77	2014-07-09
98	5F8K\|1\|2x	Transfer RNA	mRNA, tRNAiMet	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	76	2016-02-03
99	4V67\|1\|CY	Transfer RNA	MRNA, P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	77	2014-07-09
100	4WQY\|1\|DX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	76	2015-01-28
101	1VY7\|1\|CX	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	76	2014-08-20
102	4V8B\|1\|AD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	77	2014-07-09
103	4V8B\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	77	2014-07-09
104	4V67\|1\|AZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	77	2014-07-09
105	4V67\|1\|CZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	77	2014-07-09
106	6GSJ\|1\|2L	Transfer RNA	RNA (27-MER), tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	77	2018-07-04
107	6GSJ\|1\|2K	Transfer RNA	RNA (27-MER), tRNAfMet	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	77	2018-07-04
108	7K00\|1\|Z	Transfer RNA	mRNA, P-site tRNA-fMet	Escherichia coli	Bacteria	RF00005	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	76	2020-09-23
109	6XZ7\|1\|f	Transfer RNA	Deacylated tRNAi(Met)	Escherichia coli	Bacteria	RF00005	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	76	2020-07-22
110	7TOP\|1\|APTN	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.4	77	2022-05-25
111	6XZB\|1\|f2	Transfer RNA	Deacylated tRNAi(Met)	Escherichia coli K-12	Bacteria	RF00005	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	76	2020-11-04
112	7UG7\|1\|Dt	Transfer RNA	mRNA, tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	77	2022-05-18
113	7KGB\|1\|y	Transfer RNA	tRNA-initiator Met(CAU)	Mycobacterium tuberculosis H37Rv	Bacteria	RF00005	CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9	Electron microscopy	2.7	77	2022-01-19
114	7TOO\|1\|APTN	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.7	77	2022-05-25
115	7MT7\|1\|y	Transfer RNA	mRNA, tRNA (Met)	Escherichia coli	Bacteria	RF00005	Mtb 70S with P and E site tRNAs	Electron microscopy	2.71	77	2022-02-02
116	7MT7\|1\|x	Transfer RNA	tRNA (Met)	Escherichia coli	Bacteria	RF00005	Mtb 70S with P and E site tRNAs	Electron microscopy	2.71	77	2022-02-02
117	7MT2\|1\|y	Transfer RNA	initiator tRNA (Met), mRNA	Escherichia coli	Bacteria	RF00005	Mtb 70S initiation complex	Electron microscopy	2.76	77	2022-02-02
118	6XZA\|1\|f2	Transfer RNA	Deacylated tRNAi(Met)	Escherichia coli K-12	Bacteria	RF00005	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	76	2020-11-04
119	7MSM\|1\|y	Transfer RNA	initiator tRNA (Met), mRNA	Mycobacterium tuberculosis H37Rv	Bacteria	RF00005	Mtb 70SIC in complex with MtbEttA at Trans_R0 state	Electron microscopy	2.79	77	2022-02-02
120	7MT3\|1\|y	Transfer RNA	mRNA, tRNA (Met)	Escherichia coli	Bacteria	RF00005	Mtb 70S with P/E tRNA	Electron microscopy	2.8	77	2022-02-02
121	7NWT\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	76	2021-12-15
122	6AZ1\|1\|3	Transfer RNA	mRNA, P-site tRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	Electron microscopy	2.7	77	2017-12-06
123	7TOR\|1\|ETRN	Transfer RNA	tRNAfMet bound to E-site	Escherichia coli K-12	Bacteria	RF00005	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.9	77	2022-05-25
124	7ST2\|1\|6	Transfer RNA	mRNA, tRNA fMet	Escherichia coli K-12	Bacteria	RF00005	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	77	2022-02-23
125	7P7R\|1\|D	Transfer RNA	mRNA, tRNA-fMet	Enterococcus faecalis V583	Bacteria	RF00005	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I	Electron microscopy	2.9	76	2022-03-23
126	6Y69\|1\|w	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	74	2020-07-01
127	7NHN\|1\|D	Transfer RNA	RNA (5'-R(PGPAPGPGPUPNPNPNPNPNPNPAPUPG)-3'), tRNA-fMet	Listeria monocytogenes EGD-e	Bacteria	RF00005	VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes	Electron microscopy	2.9	74	2021-05-05
128	7TOR\|1\|PTRN	Transfer RNA	mRNA, tRNAfMet bound to E-site	Escherichia coli K-12	Bacteria	RF00005	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.9	74	2022-05-25
129	7MSC\|1\|y	Transfer RNA	initiator tRNA (Met), mRNA	Mycobacterium tuberculosis H37Rv	Bacteria	RF00005	Mtb 70SIC in complex with MtbEttA at Pre_R0 state	Electron microscopy	2.97	77	2022-02-02
130	5AFI\|1\|v	Transfer RNA	mRNA, P-site fMet-tRNAfMet	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	77	2015-03-11
131	5AFI\|1\|w	Transfer RNA	P-site fMet-tRNAfMet	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	77	2015-03-11
132	6WDE\|1\|5	Transfer RNA	mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	77	2020-07-01
133	7ST6\|1\|6	Transfer RNA	mRNA, tRNA fMet	Escherichia coli K-12	Bacteria	RF00005	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	77	2022-02-23
134	6H4N\|1\|w	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	77	2018-09-05
135	6WD0\|1\|5	Transfer RNA	mRNA, tRNAfMet	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	77	2020-07-01
136	6WDE\|1\|6	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	77	2020-07-01
137	6WD0\|1\|6	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	77	2020-07-01
138	7ST6\|1\|7	Transfer RNA	mRNA, tRNA fMet	Escherichia coli K-12	Bacteria	RF00005	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	77	2022-02-23
139	5WDT\|1\|v	Transfer RNA	mRNA, tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	77	2018-04-25
140	5WFS\|1\|v	Transfer RNA	mRNA, tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	77	2018-05-02
141	5WDT\|1\|w	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	77	2018-04-25
142	5WFS\|1\|w	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	77	2018-05-02
143	6ORE\|1\|5	Transfer RNA	P-tRNA, RNA (5'-R(PUPUPCPUPUPCPUPAP*A)-3')	Escherichia coli	Bacteria	RF00005	Release complex 70S	Electron microscopy	2.9	76	2019-06-19
144	5MDV\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	76	2016-12-14
145	6ZTP\|1\|AW	Transfer RNA	mRNA, tRNA(fmet) P-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	72	2020-09-16
146	6ZU1\|1\|AW	Transfer RNA	mRNA, tRNA(fmet) P-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	72	2020-09-16
147	6ZTO\|1\|AW	Transfer RNA	mRNA, tRNA(fmet) P-site	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	72	2020-09-23
148	2FMT\|1\|D	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	77	1999-07-29
149	2FMT\|1\|C	Transfer RNA	FORMYL-METHIONYL-TRNAFMET2	synthetic construct	Synthetic	RF00005	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	77	1999-07-29
150	6YSI\|1\|8+ 6YSI\|1\|6	Transfer RNA + Transfer RNA	E-site tRNA	Acinetobacter baumannii	Bacteria	RF00005 + RF00005	Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit	Electron microscopy	2.5	13	2020-09-16
151	5IQR\|1\|5	Transfer RNA	mRNA, P-site fMet-tRNA(fMet)	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	77	2016-05-04
152	6YS5\|1\|7	Transfer RNA	E-site tRNA, mRNA	Acinetobacter baumannii	Bacteria	RF00005	Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head	Electron microscopy	3	20	2020-09-16
153	6YTF\|1\|7	Transfer RNA	E-site tRNA, mRNA	Acinetobacter baumannii	Bacteria	RF00005	Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head	Electron microscopy	3	20	2020-09-16

Release history

Release	3.232	3.233	3.234	3.235
Date	2022-05-25	2022-06-01	2022-06-08	2022-06-15

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_35542.94	NR_3.0_35542.93	3.232	(149) 1VY4\|1\|AX, 1VY4\|1\|CX, 1VY5\|1\|AX, 1VY5\|1\|CX, 1VY6\|1\|AX, 1VY6\|1\|CX, 1VY7\|1\|AX, 1VY7\|1\|CX, 2FMT\|1\|C, 2FMT\|1\|D, 4LNT\|1\|QV, 4LNT\|1\|XV, 4V51\|1\|AV, 4V51\|1\|CV, 4V67\|1\|AY, 4V67\|1\|AZ, 4V67\|1\|CY, 4V67\|1\|CZ, 4V7L\|1\|AX, 4V7L\|1\|CX, 4V8B\|1\|AC, 4V8B\|1\|AD, 4V8B\|1\|CC, 4V8B\|1\|CD, 4V8D\|1\|AC, 4V8D\|1\|CC, 4V9R\|1\|AX, 4V9R\|1\|CX, 4W2F\|1\|AX, 4W2F\|1\|CX, 4W2G\|1\|AX, 4W2G\|1\|CX, 4W2H\|1\|AX, 4W2H\|1\|CX, 4W2I\|1\|AX, 4W2I\|1\|CX, 4WPO\|1\|BX, 4WPO\|1\|DX, 4WQY\|1\|BX, 4WQY\|1\|DX, 4WSD\|1\|2K, 4WSD\|1\|2L, 4Y4P\|1\|1x, 4Y4P\|1\|2x, 4Z3S\|1\|1x, 4Z3S\|1\|2x, 4Z8C\|1\|1x, 4Z8C\|1\|2x, 5AFI\|1\|v, 5AFI\|1\|w, 5DOY\|1\|1x, 5DOY\|1\|2x, 5F8K\|1\|1x, 5F8K\|1\|2x, 5HAU\|1\|1w, 5HAU\|1\|2w, 5HCP\|1\|1x, 5HCP\|1\|2x, 5HCQ\|1\|1x, 5HCQ\|1\|2x, 5HCR\|1\|1x, 5HCR\|1\|2x, 5HD1\|1\|1x, 5HD1\|1\|2x, 5IB7\|1\|2K, 5IB7\|1\|2L, 5IBB\|1\|2K, 5IBB\|1\|2L, 5IQR\|1\|5, 5J4B\|1\|1x, 5J4B\|1\|2x, 5J4C\|1\|1x, 5J4C\|1\|2x, 5L4O\|1\|A, 5MDV\|1\|5, 5W4K\|1\|1x, 5W4K\|1\|2x, 5WDT\|1\|v, 5WDT\|1\|w, 5WFS\|1\|v, 5WFS\|1\|w, 5WIS\|1\|1x, 5WIS\|1\|2x, 5WIT\|1\|1x, 5WIT\|1\|2x, 6AZ1\|1\|3, 6CAE\|1\|1x, 6CAE\|1\|2x, 6GSJ\|1\|2K, 6GSJ\|1\|2L, 6H4N\|1\|w, 6ND5\|1\|1x, 6ND5\|1\|2x, 6ND6\|1\|1x, 6ND6\|1\|2x, 6O97\|1\|1x, 6O97\|1\|2x, 6OF1\|1\|1x, 6OF1\|1\|2x, 6ORE\|1\|5, 6UO1\|1\|1x, 6UO1\|1\|2x, 6WD0\|1\|5, 6WD0\|1\|6, 6WDE\|1\|5, 6WDE\|1\|6, 6XHV\|1\|1x, 6XHV\|1\|2x, 6XHW\|1\|1x, 6XHW\|1\|2x, 6XHY\|1\|1x, 6XHY\|1\|2x, 6XQD\|1\|1x, 6XQD\|1\|2x, 6XQE\|1\|1x, 6XQE\|1\|2x, 6XZ7\|1\|f, 6XZA\|1\|f2, 6XZB\|1\|f2, 6Y69\|1\|w, 6YS5\|1\|7, 6YSI\|1\|8+6YSI\|1\|6, 6YTF\|1\|7, 6ZTO\|1\|AW, 6ZTP\|1\|AW, 6ZU1\|1\|AW, 7JQL\|1\|1x, 7JQL\|1\|2x, 7K00\|1\|Z, 7KGB\|1\|y, 7MSC\|1\|y, 7MSM\|1\|y, 7MT2\|1\|y, 7MT3\|1\|y, 7MT7\|1\|x, 7MT7\|1\|y, 7NHN\|1\|D, 7NWT\|1\|5, 7OSA\|1\|PSIT, 7OSM\|1\|PSIT, 7P7R\|1\|D, 7RQ8\|1\|1x, 7RQ8\|1\|2x, 7RQ9\|1\|1x, 7RQ9\|1\|2x, 7ST2\|1\|6, 7ST6\|1\|6, 7ST6\|1\|7, 7UG7\|1\|Dt	(4) 7TOO\|1\|APTN, 7TOP\|1\|APTN, 7TOR\|1\|ETRN, 7TOR\|1\|PTRN	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_35542.94	NR_3.0_35542.95	3.236	(153) 1VY4\|1\|AX, 1VY4\|1\|CX, 1VY5\|1\|AX, 1VY5\|1\|CX, 1VY6\|1\|AX, 1VY6\|1\|CX, 1VY7\|1\|AX, 1VY7\|1\|CX, 2FMT\|1\|C, 2FMT\|1\|D, 4LNT\|1\|QV, 4LNT\|1\|XV, 4V51\|1\|AV, 4V51\|1\|CV, 4V67\|1\|AY, 4V67\|1\|AZ, 4V67\|1\|CY, 4V67\|1\|CZ, 4V7L\|1\|AX, 4V7L\|1\|CX, 4V8B\|1\|AC, 4V8B\|1\|AD, 4V8B\|1\|CC, 4V8B\|1\|CD, 4V8D\|1\|AC, 4V8D\|1\|CC, 4V9R\|1\|AX, 4V9R\|1\|CX, 4W2F\|1\|AX, 4W2F\|1\|CX, 4W2G\|1\|AX, 4W2G\|1\|CX, 4W2H\|1\|AX, 4W2H\|1\|CX, 4W2I\|1\|AX, 4W2I\|1\|CX, 4WPO\|1\|BX, 4WPO\|1\|DX, 4WQY\|1\|BX, 4WQY\|1\|DX, 4WSD\|1\|2K, 4WSD\|1\|2L, 4Y4P\|1\|1x, 4Y4P\|1\|2x, 4Z3S\|1\|1x, 4Z3S\|1\|2x, 4Z8C\|1\|1x, 4Z8C\|1\|2x, 5AFI\|1\|v, 5AFI\|1\|w, 5DOY\|1\|1x, 5DOY\|1\|2x, 5F8K\|1\|1x, 5F8K\|1\|2x, 5HAU\|1\|1w, 5HAU\|1\|2w, 5HCP\|1\|1x, 5HCP\|1\|2x, 5HCQ\|1\|1x, 5HCQ\|1\|2x, 5HCR\|1\|1x, 5HCR\|1\|2x, 5HD1\|1\|1x, 5HD1\|1\|2x, 5IB7\|1\|2K, 5IB7\|1\|2L, 5IBB\|1\|2K, 5IBB\|1\|2L, 5IQR\|1\|5, 5J4B\|1\|1x, 5J4B\|1\|2x, 5J4C\|1\|1x, 5J4C\|1\|2x, 5L4O\|1\|A, 5MDV\|1\|5, 5W4K\|1\|1x, 5W4K\|1\|2x, 5WDT\|1\|v, 5WDT\|1\|w, 5WFS\|1\|v, 5WFS\|1\|w, 5WIS\|1\|1x, 5WIS\|1\|2x, 5WIT\|1\|1x, 5WIT\|1\|2x, 6AZ1\|1\|3, 6CAE\|1\|1x, 6CAE\|1\|2x, 6GSJ\|1\|2K, 6GSJ\|1\|2L, 6H4N\|1\|w, 6ND5\|1\|1x, 6ND5\|1\|2x, 6ND6\|1\|1x, 6ND6\|1\|2x, 6O97\|1\|1x, 6O97\|1\|2x, 6OF1\|1\|1x, 6OF1\|1\|2x, 6ORE\|1\|5, 6UO1\|1\|1x, 6UO1\|1\|2x, 6WD0\|1\|5, 6WD0\|1\|6, 6WDE\|1\|5, 6WDE\|1\|6, 6XHV\|1\|1x, 6XHV\|1\|2x, 6XHW\|1\|1x, 6XHW\|1\|2x, 6XHY\|1\|1x, 6XHY\|1\|2x, 6XQD\|1\|1x, 6XQD\|1\|2x, 6XQE\|1\|1x, 6XQE\|1\|2x, 6XZ7\|1\|f, 6XZA\|1\|f2, 6XZB\|1\|f2, 6Y69\|1\|w, 6YS5\|1\|7, 6YSI\|1\|8+6YSI\|1\|6, 6YTF\|1\|7, 6ZTO\|1\|AW, 6ZTP\|1\|AW, 6ZU1\|1\|AW, 7JQL\|1\|1x, 7JQL\|1\|2x, 7K00\|1\|Z, 7KGB\|1\|y, 7MSC\|1\|y, 7MSM\|1\|y, 7MT2\|1\|y, 7MT3\|1\|y, 7MT7\|1\|x, 7MT7\|1\|y, 7NHN\|1\|D, 7NWT\|1\|5, 7OSA\|1\|PSIT, 7OSM\|1\|PSIT, 7P7R\|1\|D, 7RQ8\|1\|1x, 7RQ8\|1\|2x, 7RQ9\|1\|1x, 7RQ9\|1\|2x, 7ST2\|1\|6, 7ST6\|1\|6, 7ST6\|1\|7, 7TOO\|1\|APTN, 7TOP\|1\|APTN, 7TOR\|1\|ETRN, 7TOR\|1\|PTRN, 7UG7\|1\|Dt	(0)	(4) 7UNR\|1\|v, 7UNU\|1\|v, 7UNV\|1\|v, 7UNW\|1\|v

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	7NHN\|1\|D	VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes	ELECTRON MICROSCOPY	2.9	74
2	7P7R\|1\|D	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I	ELECTRON MICROSCOPY	2.9	76
3	7TOP\|1\|APTN	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.4	77
4	7TOO\|1\|APTN	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.7	77
5	7MT3\|1\|y	Mtb 70S with P/E tRNA	ELECTRON MICROSCOPY	2.8	77
6	7OSA\|1\|PSIT	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	77
7	7ST2\|1\|6	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	77
8	7UG7\|1\|Dt	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	77
9	6YTF\|1\|7	Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head	ELECTRON MICROSCOPY	3	20
10	7OSM\|1\|PSIT	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	77
11	7ST6\|1\|7	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	77
12	7TOR\|1\|ETRN	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.9	77
13	6WDE\|1\|6	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	77
14	4V67\|1\|CZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
15	4V67\|1\|AZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
16	4V8B\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
17	4V8B\|1\|AD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
18	7MT7\|1\|x	Mtb 70S with P and E site tRNAs	ELECTRON MICROSCOPY	2.71	77
19	6H4N\|1\|w	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	77
20	6Y69\|1\|w	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	74
21	7TOR\|1\|PTRN	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.9	74
22	4V7L\|1\|CX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
23	4V7L\|1\|AX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
24	1VY7\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	76
25	4WQY\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	76
26	4WPO\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	76
27	1VY4\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	76
28	1VY5\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	76
29	4W2H\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	76
30	4V9R\|1\|CX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
31	4W2I\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	76
32	5DOY\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
33	7JQL\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	76
34	4Z3S\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	76
35	6ND5\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	76
36	6ND6\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	76
37	6CAE\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
38	6O97\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	76
39	5WIS\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	76
40	4Y4P\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	76
41	5W4K\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	76
42	5J4B\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
43	5J4C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	76
44	4W2G\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	76
45	4W2F\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	76
46	1VY6\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	76
47	4LNT\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
48	5WIT\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
49	6OF1\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	76
50	6UO1\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	76
51	4LNT\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
52	4V67\|1\|AY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
53	4V67\|1\|CY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
54	6WDE\|1\|5	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	77
55	6WD0\|1\|5	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	77
56	7MT2\|1\|y	Mtb 70S initiation complex	ELECTRON MICROSCOPY	2.76	77
57	7KGB\|1\|y	CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9	ELECTRON MICROSCOPY	2.7	77
58	7MT7\|1\|y	Mtb 70S with P and E site tRNAs	ELECTRON MICROSCOPY	2.71	77
59	4V51\|1\|CV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	77
60	4V51\|1\|AV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	77
61	7MSC\|1\|y	Mtb 70SIC in complex with MtbEttA at Pre_R0 state	ELECTRON MICROSCOPY	2.97	77
62	7MSM\|1\|y	Mtb 70SIC in complex with MtbEttA at Trans_R0 state	ELECTRON MICROSCOPY	2.79	77
63	6ZU1\|1\|AW	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	72
64	6ZTO\|1\|AW	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	72
65	6ZTP\|1\|AW	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	72
66	5F8K\|1\|2x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	76
67	5AFI\|1\|v	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	77
68	6GSJ\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	77
69	5IB7\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	77
70	5IBB\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	76
71	4WSD\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	77
72	4V8D\|1\|CC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
73	4WSD\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	77
74	5IBB\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	77
75	4V8D\|1\|AC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
76	5IB7\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	77
77	6GSJ\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	77
78	4V8B\|1\|AC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
79	7ST6\|1\|6	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	77
80	6XZ7\|1\|f	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	76
81	6XZA\|1\|f2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	76
82	4Z3S\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	76
83	5HD1\|1\|2x	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	76
84	5HCR\|1\|2x	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	76
85	5HCP\|1\|2x	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	76
86	4Z8C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	76
87	5HCQ\|1\|2x	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	76
88	5HCP\|1\|1x	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	76
89	5HCR\|1\|1x	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	76
90	5HD1\|1\|1x	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	76
91	5HCQ\|1\|1x	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	76
92	4Z8C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	76
93	5HAU\|1\|2w	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	76
94	5HAU\|1\|1w	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	76
95	5DOY\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
96	4W2I\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	76
97	1VY4\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	76
98	1VY5\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	76
99	6XZB\|1\|f2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	76
100	4W2G\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	76
101	1VY7\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	76
102	1VY6\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	76
103	4V9R\|1\|AX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
104	4WQY\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	76
105	4WPO\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	76
106	5F8K\|1\|1x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	76
107	7JQL\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	76
108	6UO1\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	76
109	7RQ9\|1\|1x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	76
110	7RQ8\|1\|1x	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	76
111	6ND5\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	76
112	6XQD\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-RAY DIFFRACTION	2.8	76
113	6OF1\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	76
114	6CAE\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
115	6O97\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	76
116	6ND6\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	76
117	4W2H\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	76
118	6XQE\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	76
119	6XQE\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	76
120	7RQ8\|1\|2x	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	76
121	7RQ9\|1\|2x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	76
122	5WIS\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	76
123	5W4K\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	76
124	4Y4P\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	76
125	5J4B\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
126	5J4C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	76
127	4W2F\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	76
128	5WIT\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	76
129	6XHY\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	76
130	6XHW\|1\|2x	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	76
131	6XHW\|1\|1x	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	76
132	6XHY\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	76
133	6XHV\|1\|1x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	76
134	6XHV\|1\|2x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	76
135	6XQD\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-RAY DIFFRACTION	2.8	76
136	4V8B\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
137	7K00\|1\|Z	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	76
138	5WFS\|1\|v	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	77
139	5WDT\|1\|v	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	77
140	7NWT\|1\|5	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	76
141	5MDV\|1\|5	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	76
142	5IQR\|1\|5	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	77
143	6ORE\|1\|5	Release complex 70S	ELECTRON MICROSCOPY	2.9	76
144	6AZ1\|1\|3	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	ELECTRON MICROSCOPY	2.7	77
145	6YS5\|1\|7	Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head	ELECTRON MICROSCOPY	3	20
146	2FMT\|1\|D	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	77
147	2FMT\|1\|C	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	77
148	5L4O\|1\|A	Structure of an E.coli initiator tRNAfMet A1-U72 variant	X-RAY DIFFRACTION	2.8	76
149	6WD0\|1\|6	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	77
150	5WDT\|1\|w	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	77
151	5AFI\|1\|w	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	77
152	5WFS\|1\|w	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	77
153	6YSI\|1\|8+ 6YSI\|1\|6	Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit	ELECTRON MICROSCOPY	2.5	13

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_35542.94 Obsolete

Release history

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