NR_3.0_35542.99

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5L4O\|1\|A (rep)	Transfer RNA	tRNA (76-MER)	Escherichia coli	Bacteria	RF00005	Structure of an E.coli initiator tRNAfMet A1-U72 variant	X-ray diffraction	2.8	2017-03-01
2	5HCQ\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
3	5IBB\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
4	6CAE\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-04-18
5	7U2J\|1\|1x	Transfer RNA	P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-part, MG-mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-ray diffraction	2.55	2022-07-13
6	5HCQ\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
7	7OSA\|1\|PSIT	Transfer RNA	Psite tRNA-Phe, MRNA	Escherichia coli	Bacteria	RF00005	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	2021-12-08
8	7U2H\|1\|1x	Transfer RNA	P-site Aminoacyl-tRNA fMet-NH-tRNAmet, MG-mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution	X-ray diffraction	2.55	2022-07-13
9	5IB7\|1\|2K	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
10	4V8D\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
11	7RQ8\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2021-10-13
12	5HCR\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
13	4Z8C\|1\|1x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
14	5J4B\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
15	7U2J\|1\|2x	Transfer RNA	P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-part, MG-mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-ray diffraction	2.55	2022-07-13
16	6XHY\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	2020-12-23
17	4WSD\|1\|2L	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
18	4V8D\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
19	5IBB\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
20	6XHY\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-ray diffraction	2.6	2020-12-23
21	5J4B\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
22	4Z8C\|1\|2x	Transfer RNA	Initiator Methionine tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
23	4WSD\|1\|2K	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
24	6CAE\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-04-18
25	5J4C\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
26	4WPO\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
27	5W4K\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2017-08-30
28	1VY4\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
29	6OF1\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	2019-04-17
30	6XHW\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2020-12-23
31	4W2H\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
32	7RQ8\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2021-10-13
33	5HCR\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
34	5HD1\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
35	4LNT\|1\|XV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
36	5HCP\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
37	6OF1\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	2019-04-17
38	5HAU\|1\|1w	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
39	5J4C\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
40	7U2I\|1\|1x	Transfer RNA	P-site Aminoacyl-tRNA fMet-NH-tRNAmet, MG-mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-ray diffraction	2.55	2022-07-13
41	4W2I\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
42	6XHV\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	2020-12-23
43	5WIS\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2018-02-14
44	5IB7\|1\|2L	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
45	4W2G\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
46	6XQD\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-ray diffraction	2.8	2020-08-05
47	6ND5\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	2019-03-20
48	4LNT\|1\|QV	Transfer RNA	P-site tRNA fMet, messenger RNA, A-site ASL SufA6	Escherichia coli	Bacteria	RF00005	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
49	4W2H\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
50	5W4K\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2017-08-30
51	7U2H\|1\|2x	Transfer RNA	P-site Aminoacyl-tRNA fMet-NH-tRNAmet, MG-mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution	X-ray diffraction	2.55	2022-07-13
52	6XHW\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-ray diffraction	2.5	2020-12-23
53	5HAU\|1\|2w	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
54	6XQD\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-ray diffraction	2.8	2020-08-05
55	6XHV\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-ray diffraction	2.4	2020-12-23
56	4Y4P\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
57	4W2G\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
58	6O97\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	2019-04-17
59	5HCP\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
60	5DOY\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
61	5WIT\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-02-14
62	5HD1\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
63	4W2I\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
64	6ND5\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	2019-03-20
65	7RQ9\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-ray diffraction	2.6	2021-10-13
66	1VY7\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
67	4Z3S\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
68	1VY4\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
69	4W2F\|1\|AX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
70	1VY5\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
71	4WPO\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
72	4V51\|1\|CV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
73	7JQL\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	2020-08-26
74	7U2I\|1\|2x	Transfer RNA	P-site Aminoacyl-tRNA fMet-NH-tRNAmet, MG-mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-ray diffraction	2.55	2022-07-13
75	7JQL\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	2020-08-26
76	4V9R\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
77	7RQ9\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-ray diffraction	2.6	2021-10-13
78	4V9R\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
79	4W2F\|1\|CX	Transfer RNA	E-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
80	5WIS\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2018-02-14
81	4V51\|1\|AV	Transfer RNA	P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA	Escherichia coli	Bacteria	RF00005	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
82	6ND6\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	2019-02-20
83	6O97\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	2019-04-17
84	4Y4P\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
85	1VY6\|1\|AX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
86	4Z3S\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
87	6UO1\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	2019-11-27
88	6UO1\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	2019-11-27
89	1VY6\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
90	4WQY\|1\|BX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
91	5DOY\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
92	5WIT\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-02-14
93	5F8K\|1\|1x	Transfer RNA	tRNAiMet, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
94	7OSM\|1\|PSIT	Transfer RNA	FMET tRNA, MRNA	Escherichia coli	Bacteria	RF00005	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	2021-12-08
95	6ND6\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	2019-02-20
96	1VY5\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
97	4V8B\|1\|AC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
98	6XQE\|1\|1x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	2020-08-05
99	4V67\|1\|AY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
100	6XQE\|1\|2x	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-ray diffraction	3	2020-08-05
101	4V7L\|1\|CX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
102	4V8B\|1\|CC	Transfer RNA	TRNA-FMET, MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
103	4V7L\|1\|AX	Transfer RNA	tRNA-Met, RNA (5'-R(APAPAPAPAPGPGPAPAPAPUPAAPAPAPAPUPGPCPAPGPUPUPCPAPAPUPCPUPA)-3')	Escherichia coli	Bacteria	RF00005	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
104	5F8K\|1\|2x	Transfer RNA	tRNAiMet, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
105	4V67\|1\|CY	Transfer RNA	P AND E-SITE TRNA(FMET), MRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
106	4WQY\|1\|DX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
107	1VY7\|1\|CX	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
108	4V8B\|1\|AD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
109	4V8B\|1\|CD	Transfer RNA	TRNA-FMET	Escherichia coli	Bacteria	RF00005	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
110	4V67\|1\|AZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
111	4V67\|1\|CZ	Transfer RNA	P AND E-SITE TRNA(FMET)	Escherichia coli	Bacteria	RF00005	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
112	6GSJ\|1\|2L	Transfer RNA	tRNAfMet, RNA (27-MER)	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	2018-07-04
113	6GSJ\|1\|2K	Transfer RNA	tRNAfMet, RNA (27-MER)	Escherichia coli	Bacteria	RF00005	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	2018-07-04
114	7K00\|1\|Z	Transfer RNA	P-site tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	Electron microscopy	1.98	2020-09-23
115	6XZ7\|1\|f	Transfer RNA	Deacylated tRNAi(Met)	Escherichia coli	Bacteria	RF00005	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	Electron microscopy	2.1	2020-07-22
116	7TOP\|1\|APTN	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.4	2022-05-25
117	7SA4\|1\|5	Transfer RNA	P-tRNA, E-tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	2022-08-03
118	7SA4\|1\|6	Transfer RNA	P-tRNA, E-tRNA	Escherichia coli	Bacteria	RF00005	Damaged 70S ribosome with PrfH bound	Electron microscopy	2.55	2022-08-03
119	6XZB\|1\|f2	Transfer RNA	Deacylated tRNAi(Met)	Escherichia coli K-12	Bacteria	RF00005	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.54	2020-11-04
120	7UG7\|1\|Dt	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	Electron microscopy	2.58	2022-05-18
121	7KGB\|1\|y	Transfer RNA	tRNA-initiator Met(CAU)	Mycobacterium tuberculosis H37Rv	Bacteria	RF00005	CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9	Electron microscopy	2.7	2022-01-19
122	7TOO\|1\|APTN	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.7	2022-05-25
123	7UNW\|1\|v	Transfer RNA	P-site initiator tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)	Electron microscopy	2.6	2022-06-22
124	7MT7\|1\|y	Transfer RNA	tRNA (Met), mRNA	Escherichia coli	Bacteria	RF00005	Mtb 70S with P and E site tRNAs	Electron microscopy	2.71	2022-02-02
125	7MT7\|1\|x	Transfer RNA	tRNA (Met)	Escherichia coli	Bacteria	RF00005	Mtb 70S with P and E site tRNAs	Electron microscopy	2.71	2022-02-02
126	7MT2\|1\|y	Transfer RNA	initiator tRNA (Met), mRNA	Escherichia coli	Bacteria	RF00005	Mtb 70S initiation complex	Electron microscopy	2.76	2022-02-02
127	6XZA\|1\|f2	Transfer RNA	Deacylated tRNAi(Met)	Escherichia coli K-12	Bacteria	RF00005	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	Electron microscopy	2.66	2020-11-04
128	7MSM\|1\|y	Transfer RNA	initiator tRNA (Met), mRNA	Mycobacterium tuberculosis H37Rv	Bacteria	RF00005	Mtb 70SIC in complex with MtbEttA at Trans_R0 state	Electron microscopy	2.79	2022-02-02
129	7MT3\|1\|y	Transfer RNA	tRNA (Met), mRNA	Escherichia coli	Bacteria	RF00005	Mtb 70S with P/E tRNA	Electron microscopy	2.8	2022-02-02
130	7UNV\|1\|v	Transfer RNA	P-site initiator tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)	Electron microscopy	2.7	2022-06-22
131	7NWT\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	Electron microscopy	2.66	2021-12-15
132	6AZ1\|1\|3	Transfer RNA	P-site tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	Electron microscopy	2.7	2017-12-06
133	7ZAH\|1\|4	Transfer RNA	tRNA-MET, mRNA	Pyrococcus abyssi GE5	Archaea	RF00005	Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex	Electron microscopy	2.7	2022-08-03
134	7TOR\|1\|ETRN	Transfer RNA	tRNAfMet bound to E-site	Escherichia coli K-12	Bacteria	RF00005	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.9	2022-05-25
135	7ST2\|1\|6	Transfer RNA	tRNA fMet, mRNA	Escherichia coli K-12	Bacteria	RF00005	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	Electron microscopy	2.9	2022-02-23
136	7P7R\|1\|D	Transfer RNA	tRNA-fMet, mRNA	Enterococcus faecalis V583	Bacteria	RF00005	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I	Electron microscopy	2.9	2022-03-23
137	6Y69\|1\|w	Transfer RNA	E-site tRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	Electron microscopy	2.86	2020-07-01
138	7NHN\|1\|D	Transfer RNA	tRNA-fMet, RNA (5'-R(PGPAPGPGPUPNPNPNPNPNPNPAPUPG)-3')	Listeria monocytogenes EGD-e	Bacteria	RF00005	VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes	Electron microscopy	2.9	2021-05-05
139	7TOR\|1\|PTRN	Transfer RNA	tRNAfMet bound to E-site, mRNA	Escherichia coli K-12	Bacteria	RF00005	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.9	2022-05-25
140	7MSC\|1\|y	Transfer RNA	initiator tRNA (Met), mRNA	Mycobacterium tuberculosis H37Rv	Bacteria	RF00005	Mtb 70SIC in complex with MtbEttA at Pre_R0 state	Electron microscopy	2.97	2022-02-02
141	5AFI\|1\|v	Transfer RNA	P-site fMet-tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
142	5AFI\|1\|w	Transfer RNA	P-site fMet-tRNAfMet	Escherichia coli	Bacteria	RF00005	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	Electron microscopy	2.9	2015-03-11
143	6WDE\|1\|5	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	2020-07-01
144	7ST6\|1\|6	Transfer RNA	tRNA fMet, mRNA	Escherichia coli K-12	Bacteria	RF00005	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	2022-02-23
145	6H4N\|1\|w	Transfer RNA	tRNA	Escherichia coli	Bacteria	RF00005	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	Electron microscopy	3	2018-09-05
146	6WD0\|1\|5	Transfer RNA	tRNAfMet, mRNA	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	2020-07-01
147	6WDE\|1\|6	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	Electron microscopy	3	2020-07-01
148	6WD0\|1\|6	Transfer RNA	tRNAfMet	Escherichia coli	Bacteria	RF00005	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	Electron microscopy	3	2020-07-01
149	7ST6\|1\|7	Transfer RNA	tRNA fMet, mRNA	Escherichia coli K-12	Bacteria	RF00005	Pre translocation, non-rotated 70S ribosome (Structure I)	Electron microscopy	3	2022-02-23
150	7UNU\|1\|v	Transfer RNA	P-site initiator tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)	Electron microscopy	2.9	2022-06-22
151	7UNR\|1\|v	Transfer RNA	P-site initiator tRNA, mRNA	Escherichia coli	Bacteria	RF00005	Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)	Electron microscopy	2.9	2022-06-22
152	7ZAG\|1\|4	Transfer RNA	Met-tRNAiMET, mRNA	Pyrococcus abyssi GE5	Archaea	RF00005	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.	Electron microscopy	2.77	2022-08-03
153	5WDT\|1\|v	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2018-04-25
154	5WFS\|1\|v	Transfer RNA	tRNA-fMet, mRNA	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	2018-05-02
155	5WDT\|1\|w	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GppNHp	Electron microscopy	3	2018-04-25
156	5WFS\|1\|w	Transfer RNA	tRNA-fMet	Escherichia coli	Bacteria	RF00005	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	Electron microscopy	3	2018-05-02
157	6ORE\|1\|5	Transfer RNA	P-tRNA, RNA (5'-R(PUPUPCPUPUPCPUPAP*A)-3')	Escherichia coli	Bacteria	RF00005	Release complex 70S	Electron microscopy	2.9	2019-06-19
158	5MDV\|1\|5	Transfer RNA	fMet-NH-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	Electron microscopy	2.97	2016-12-14
159	6ZTP\|1\|AW	Transfer RNA	tRNA(fmet) P-site, mRNA	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 6	Electron microscopy	3	2020-09-16
160	6ZU1\|1\|AW	Transfer RNA	tRNA(fmet) P-site, mRNA	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 2	Electron microscopy	3	2020-09-16
161	6ZTO\|1\|AW	Transfer RNA	tRNA(fmet) P-site, mRNA	Escherichia coli	Bacteria	RF00005	E. coli 70S-RNAP expressome complex in uncoupled state 1	Electron microscopy	3	2020-09-23
162	7ZAI\|1\|4	Transfer RNA	tRNA-MET, mRNA	Pyrococcus abyssi GE5	Archaea	RF00005	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.	Electron microscopy	2.6	2022-07-13
163	2FMT\|1\|D		FORMYL-METHIONYL-TRNAFMET2	synthetic construct			METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
164	2FMT\|1\|C		FORMYL-METHIONYL-TRNAFMET2	synthetic construct			METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-ray diffraction	2.8	1999-07-29
165	7ZHG\|1\|4	Transfer RNA	Met-tRNAiMet, mRNA	Pyrococcus abyssi GE5	Archaea	RF00005	High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop	Electron microscopy	2.25	2022-06-29
166	6YSI\|1\|8+ 6YSI\|1\|6	Transfer RNA + Transfer RNA	E-site tRNA	Acinetobacter baumannii	Bacteria	RF00005 + RF00005	Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit	Electron microscopy	2.5	2020-09-16
167	5IQR\|1\|5	Transfer RNA	P-site fMet-tRNA(fMet), mRNA	Escherichia coli	Bacteria	RF00005	Structure of RelA bound to the 70S ribosome	Electron microscopy	3	2016-05-04
168	6YS5\|1\|7	Transfer RNA	E-site tRNA, mRNA	Acinetobacter baumannii	Bacteria	RF00005	Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head	Electron microscopy	3	2020-09-16
169	6YTF\|1\|7	Transfer RNA	E-site tRNA, mRNA	Acinetobacter baumannii	Bacteria	RF00005	Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head	Electron microscopy	3	2020-09-16

Release history

Release	3.242	3.243	3.244	3.245	3.246	3.247	3.248	3.249	3.250	3.251	3.252
Date	2022-08-03	2022-08-10	2022-08-17	2022-08-24	2022-08-31	2022-09-07	2022-09-14	2022-09-21	2022-09-28	2022-10-05	2022-10-12

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_35542.99	NR_3.0_35542.98	3.242	(165) 6XHY\|1\|1x, 4Z8C\|1\|1x, 1VY6\|1\|CX, 5J4B\|1\|2x, 7MT7\|1\|y, 4W2F\|1\|CX, 6ND6\|1\|2x, 7UNR\|1\|v, 6XZB\|1\|f2, 5HAU\|1\|1w, 4V51\|1\|CV, 5WDT\|1\|w, 7RQ9\|1\|1x, 4WPO\|1\|DX, 6WD0\|1\|5, 5HD1\|1\|1x, 7JQL\|1\|2x, 4V8B\|1\|AD, 6CAE\|1\|1x, 7TOR\|1\|PTRN, 4Z3S\|1\|2x, 5J4B\|1\|1x, 7MT7\|1\|x, 7UG7\|1\|Dt, 5F8K\|1\|2x, 5WDT\|1\|v, 7RQ8\|1\|2x, 5HCR\|1\|2x, 7JQL\|1\|1x, 7TOR\|1\|ETRN, 6XHW\|1\|2x, 1VY6\|1\|AX, 4W2F\|1\|AX, 6ND6\|1\|1x, 6XZA\|1\|f2, 4V51\|1\|AV, 4WPO\|1\|BX, 6UO1\|1\|2x, 6ZU1\|1\|AW, 4V8B\|1\|AC, 6AZ1\|1\|3, 4Z3S\|1\|1x, 5IQR\|1\|5, 7MT3\|1\|y, 7U2J\|1\|2x, 5F8K\|1\|1x, 5W4K\|1\|2x, 7RQ8\|1\|1x, 5HCR\|1\|1x, 7TOP\|1\|APTN, 1VY5\|1\|CX, 4V9R\|1\|CX, 6ND5\|1\|2x, 6XZ7\|1\|f, 4LNT\|1\|XV, 4W2I\|1\|CX, 6UO1\|1\|1x, 6ZTP\|1\|AW, 4V7L\|1\|CX, 5WIT\|1\|2x, 6XHW\|1\|1x, 5IBB\|1\|2L, 7MT2\|1\|y, 7U2J\|1\|1x, 5DOY\|1\|2x, 5W4K\|1\|1x, 7P7R\|1\|D, 7ZHG\|1\|4, 5HCQ\|1\|2x, 5WIT\|1\|1x, 7TOO\|1\|APTN, 4Y4P\|1\|2x, 1VY5\|1\|AX, 4V9R\|1\|AX, 6ND5\|1\|1x, 6XQE\|1\|2x, 4LNT\|1\|QV, 4W2I\|1\|AX, 6ORE\|1\|5, 6ZTO\|1\|AW, 4V7L\|1\|AX, 6XHV\|1\|2x, 5IBB\|1\|2K, 7MSM\|1\|y, 7U2I\|1\|2x, 5DOY\|1\|1x, 5MDV\|1\|5, 7OSM\|1\|PSIT, 7ZAI\|1\|4, 5HCQ\|1\|1x, 5WIS\|1\|2x, 7ST6\|1\|7, 4Y4P\|1\|1x, 1VY4\|1\|CX	(4) 7ZAG\|1\|4, 7SA4\|1\|5, 7SA4\|1\|6, 7ZAH\|1\|4	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_35542.99	NR_3.0_35542.100	3.253	(169) 7MSM\|1\|y, 6ND6\|1\|2x, 4W2H\|1\|AX, 5HCP\|1\|2x, 7U2I\|1\|1x, 6Y69\|1\|w, 4V8B\|1\|AC, 5WIS\|1\|2x, 7RQ9\|1\|2x, 4Z3S\|1\|2x, 6XHW\|1\|1x, 5J4C\|1\|1x, 2FMT\|1\|D, 7MT3\|1\|y, 6O97\|1\|2x, 4W2I\|1\|AX, 5HCQ\|1\|2x, 7U2J\|1\|1x, 4V8B\|1\|CC, 6YSI\|1\|8+6YSI\|1\|6, 6AZ1\|1\|3, 5AFI\|1\|v, 7ST2\|1\|6, 6XHY\|1\|1x, 4LNT\|1\|XV, 5L4O\|1\|A, 7MT7\|1\|y, 4WPO\|1\|BX, 6OF1\|1\|2x, 5HD1\|1\|1x, 1VY4\|1\|AX, 7UG7\|1\|Dt, 6ZTP\|1\|AW, 6CAE\|1\|2x, 4V8D\|1\|CC, 5DOY\|1\|1x, 7ST6\|1\|7, 6XQD\|1\|1x, 4V51\|1\|CV, 5W4K\|1\|1x, 7NWT\|1\|5, 4WQY\|1\|DX, 6UO1\|1\|2x, 5IB7\|1\|2K, 1VY5\|1\|AX, 7UNV\|1\|v, 7JQL\|1\|1x, 6GSJ\|1\|2L, 4V9R\|1\|CX, 5F8K\|1\|1x, 7TOP\|1\|APTN, 6XQE\|1\|1x, 4V67\|1\|CY, 5WDT\|1\|w, 7P7R\|1\|D, 4WSD\|1\|2L, 6WD0\|1\|6, 5IBB\|1\|2K, 1VY6\|1\|AX, 7ZAG\|1\|4, 7K00\|1\|Z, 6ND5\|1\|1x, 4W2F\|1\|CX, 5HAU\|1\|2w, 7U2H\|1\|1x, 6XZA\|1\|f2, 4V7L\|1\|AX, 5WFS\|1\|w, 7RQ8\|1\|2x, 4Y4P\|1\|2x, 6WDE\|1\|6, 5IQR\|1\|5, 1VY7\|1\|AX, 7ZAI\|1\|4, 7MSC\|1\|y, 6XHV\|1\|2x, 5WIT\|1\|2x, 5HCR\|1\|2x, 4WQY\|1\|BX, 4V67\|1\|AZ, 7TOR\|1\|PTRN, 4W2G\|1\|CX, 5J4B\|1\|2x, 2FMT\|1\|C, 4Z8C\|1\|2x, 7SA4\|1\|6, 6ZTO\|1\|AW, 6UO1\|1\|1x, 7UNU\|1\|v, 5WDT\|1\|v, 7OSM\|1\|PSIT, 5HAU\|1\|1w, 6XZ7\|1\|f, 6ND6\|1\|1x, 7U2	(0)	(7) 7M5D\|1\|5, 8CVJ\|1\|1x, 8CVK\|1\|1x, 8CVJ\|1\|2x, 8CVK\|1\|2x, 8CVL\|1\|1x, 8CVL\|1\|2x

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).

#S	PDB	Title	Method	Resolution	Length
1	6YSI\|1\|8+6YSI\|1\|6	Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit	ELECTRON MICROSCOPY	2.5	8
2	7NHN\|1\|D	VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes	ELECTRON MICROSCOPY	2.9	74
3	7P7R\|1\|D	PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I	ELECTRON MICROSCOPY	2.9	76
4	4V8B\|1\|AC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
5	4V8B\|1\|CC	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
6	4V8D\|1\|AC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
7	4V8D\|1\|CC	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	77
8	4WSD\|1\|2K	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	72
9	5IBB\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	72
10	6GSJ\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	72
11	5IB7\|1\|2K	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	72
12	4WSD\|1\|2L	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	72
13	5IBB\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	71
14	5IB7\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	72
15	6GSJ\|1\|2L	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	72
16	5HCP\|1\|2x	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	72
17	4Z8C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	72
18	5HCQ\|1\|2x	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
19	5HCR\|1\|2x	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
20	5HD1\|1\|2x	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	72
21	5HD1\|1\|1x	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	72
22	5HCR\|1\|1x	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
23	5HCP\|1\|1x	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	72
24	5HCQ\|1\|1x	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
25	4Z8C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	72
26	5HAU\|1\|1w	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	72
27	5HAU\|1\|2w	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	72
28	4Z3S\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	71
29	5DOY\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	71
30	4W2I\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
31	4WPO\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
32	4WQY\|1\|BX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
33	4V9R\|1\|AX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
34	4W2G\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
35	6XZB\|1\|f2	E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.54	72
36	1VY5\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
37	1VY4\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
38	1VY6\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
39	1VY7\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
40	6XZ7\|1\|f	E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).	ELECTRON MICROSCOPY	2.1	72
41	6XZA\|1\|f2	E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).	ELECTRON MICROSCOPY	2.66	72
42	5F8K\|1\|2x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
43	5F8K\|1\|1x	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	72
44	7JQL\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	72
45	6UO1\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	72
46	6XQD\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-RAY DIFFRACTION	2.8	72
47	4W2H\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
48	6XQE\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	72
49	6XQE\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	72
50	7RQ8\|1\|2x	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	71
51	7RQ9\|1\|2x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	71
52	7RQ9\|1\|1x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	71
53	7RQ8\|1\|1x	Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	71
54	6ND5\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	72
55	6XQD\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolution	X-RAY DIFFRACTION	2.8	72
56	6ND6\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	72
57	6O97\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	72
58	6CAE\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
59	6OF1\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	72
60	7U2J\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-RAY DIFFRACTION	2.55	72
61	7U2H\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution	X-RAY DIFFRACTION	2.55	72
62	7U2I\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-RAY DIFFRACTION	2.55	72
63	7U2J\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-RAY DIFFRACTION	2.55	72
64	7U2H\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution	X-RAY DIFFRACTION	2.55	72
65	7U2I\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution	X-RAY DIFFRACTION	2.55	72
66	6XHW\|1\|2x	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	71
67	6XHY\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	71
68	6XHV\|1\|2x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	71
69	6XHV\|1\|1x	Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolution	X-RAY DIFFRACTION	2.4	71
70	6XHY\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolution	X-RAY DIFFRACTION	2.6	71
71	6XHW\|1\|1x	Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution	X-RAY DIFFRACTION	2.5	71
72	5WIT\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
73	5W4K\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	72
74	5WIS\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	72
75	4Y4P\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
76	4W2F\|1\|AX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
77	5J4C\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	72
78	5J4B\|1\|1x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
79	7UNU\|1\|v	Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)	ELECTRON MICROSCOPY	2.9	72
80	7UNR\|1\|v	Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)	ELECTRON MICROSCOPY	2.9	72
81	6ZTO\|1\|AW	E. coli 70S-RNAP expressome complex in uncoupled state 1	ELECTRON MICROSCOPY	3	72
82	6ZU1\|1\|AW	E. coli 70S-RNAP expressome complex in uncoupled state 2	ELECTRON MICROSCOPY	3	72
83	6ZTP\|1\|AW	E. coli 70S-RNAP expressome complex in uncoupled state 6	ELECTRON MICROSCOPY	3	72
84	5AFI\|1\|v	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	73
85	7ST6\|1\|6	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	77
86	7K00\|1\|Z	Structure of the Bacterial Ribosome at 2 Angstrom Resolution	ELECTRON MICROSCOPY	1.98	76
87	5WFS\|1\|v	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	73
88	5WDT\|1\|v	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	73
89	7NWT\|1\|5	Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)	ELECTRON MICROSCOPY	2.66	70
90	5MDV\|1\|5	Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)	ELECTRON MICROSCOPY	2.97	70
91	5IQR\|1\|5	Structure of RelA bound to the 70S ribosome	ELECTRON MICROSCOPY	3	72
92	7SA4\|1\|5	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	77
93	6WDE\|1\|5	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	77
94	6WD0\|1\|5	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	77
95	4V67\|1\|CY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
96	4V67\|1\|AY	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
97	6UO1\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	72
98	1VY7\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	71
99	4V9R\|1\|CX	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	76
100	4W2H\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	72
101	4WQY\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	72
102	4WPO\|1\|DX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	71
103	1VY6\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	71
104	1VY4\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	71
105	1VY5\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	72
106	4W2G\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	72
107	4W2F\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	72
108	4W2I\|1\|CX	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	72
109	4Z3S\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	71
110	7JQL\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolution	X-RAY DIFFRACTION	3	72
111	5DOY\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	71
112	6ND5\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	72
113	5WIS\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	72
114	4Y4P\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	72
115	5W4K\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	72
116	5J4B\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
117	5J4C\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	72
118	6ND6\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	72
119	6O97\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	72
120	6CAE\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
121	6OF1\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	72
122	5WIT\|1\|2x	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	72
123	4LNT\|1\|XV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
124	4LNT\|1\|QV	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	77
125	4V7L\|1\|CX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
126	4V7L\|1\|AX	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	77
127	4V51\|1\|CV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
128	4V51\|1\|AV	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	76
129	7MT2\|1\|y	Mtb 70S initiation complex	ELECTRON MICROSCOPY	2.76	77
130	7KGB\|1\|y	CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9	ELECTRON MICROSCOPY	2.7	77
131	7MT7\|1\|y	Mtb 70S with P and E site tRNAs	ELECTRON MICROSCOPY	2.71	77
132	7MSC\|1\|y	Mtb 70SIC in complex with MtbEttA at Pre_R0 state	ELECTRON MICROSCOPY	2.97	77
133	7MSM\|1\|y	Mtb 70SIC in complex with MtbEttA at Trans_R0 state	ELECTRON MICROSCOPY	2.79	77
134	7TOR\|1\|PTRN	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.9	74
135	6YTF\|1\|7	Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit head	ELECTRON MICROSCOPY	3	20
136	7OSM\|1\|PSIT	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	77
137	7ST2\|1\|6	Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)	ELECTRON MICROSCOPY	2.9	77
138	7UG7\|1\|Dt	70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B	ELECTRON MICROSCOPY	2.58	72
139	7OSA\|1\|PSIT	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	77
140	7MT3\|1\|y	Mtb 70S with P/E tRNA	ELECTRON MICROSCOPY	2.8	77
141	7TOO\|1\|APTN	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.7	77
142	7TOP\|1\|APTN	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.4	77
143	7ST6\|1\|7	Pre translocation, non-rotated 70S ribosome (Structure I)	ELECTRON MICROSCOPY	3	77
144	7TOR\|1\|ETRN	Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.9	77
145	7SA4\|1\|6	Damaged 70S ribosome with PrfH bound	ELECTRON MICROSCOPY	2.55	77
146	7MT7\|1\|x	Mtb 70S with P and E site tRNAs	ELECTRON MICROSCOPY	2.71	77
147	4V8B\|1\|AD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
148	4V8B\|1\|CD	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	77
149	4V67\|1\|AZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
150	4V67\|1\|CZ	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	77
151	6WDE\|1\|6	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)	ELECTRON MICROSCOPY	3	77
152	6H4N\|1\|w	Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome	ELECTRON MICROSCOPY	3	77
153	6Y69\|1\|w	Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX	ELECTRON MICROSCOPY	2.86	74
154	6WD0\|1\|6	Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)	ELECTRON MICROSCOPY	3	77
155	5WFS\|1\|w	70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)	ELECTRON MICROSCOPY	3	73
156	5AFI\|1\|w	2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM	ELECTRON MICROSCOPY	2.9	73
157	5WDT\|1\|w	70S ribosome-EF-Tu H84A complex with GppNHp	ELECTRON MICROSCOPY	3	73
158	5L4O\|1\|A	Structure of an E.coli initiator tRNAfMet A1-U72 variant	X-RAY DIFFRACTION	2.8	71
159	7ZAI\|1\|4	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.	ELECTRON MICROSCOPY	2.6	72
160	7ZAH\|1\|4	Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complex	ELECTRON MICROSCOPY	2.7	72
161	7ZAG\|1\|4	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.	ELECTRON MICROSCOPY	2.77	72
162	7ZHG\|1\|4	High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop	ELECTRON MICROSCOPY	2.25	18
163	7UNV\|1\|v	Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)	ELECTRON MICROSCOPY	2.7	72
164	7UNW\|1\|v	Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)	ELECTRON MICROSCOPY	2.6	72
165	2FMT\|1\|D	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
166	2FMT\|1\|C	METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMET	X-RAY DIFFRACTION	2.8	72
167	6YS5\|1\|7	Acinetobacter baumannii ribosome-amikacin complex - 30S subunit head	ELECTRON MICROSCOPY	3	20
168	6AZ1\|1\|3	Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin	ELECTRON MICROSCOPY	2.7	77
169	6ORE\|1\|5	Release complex 70S	ELECTRON MICROSCOPY	2.9	71

Equivalence class NR_3.0_35542.99 Obsolete

Release history

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