NR_3.0_42622.38

Members (110)
History
Heat map

#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	5FDV\|1\|1B (rep)	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-01-27
2	5FDU\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	120	2016-01-27
3	4Y4O\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	120	2015-03-18
4	4Y4O\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	120	2015-03-18
5	5IBB\|1\|16	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	122	2016-05-25
6	5HCQ\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-04-06
7	4WPO\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	120	2015-01-28
8	5E81\|1\|16	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-ray diffraction	2.95	122	2016-01-27
9	6CFL\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-ray diffraction	2.6	120	2018-03-07
10	6CAE\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	120	2018-04-18
11	5FDV\|1\|2B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-01-27
12	5IB7\|1\|16	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	122	2016-05-25
13	4V8I\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	120	2014-07-09
14	5FDU\|1\|2B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	120	2016-01-27
15	5IBB\|1\|1J	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	122	2016-05-25
16	5W4K\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	120	2017-08-30
17	5E81\|1\|1J	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-ray diffraction	2.95	122	2016-01-27
18	6CFK\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-ray diffraction	2.7	120	2018-03-07
19	4WQU\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	120	2015-01-28
20	5NDK\|1\|16	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	122	2017-12-13
21	4WSD\|1\|16	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	122	2015-06-10
22	5HCR\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-04-06
23	5NDK\|1\|1J	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	122	2017-12-13
24	5J4B\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	120	2016-04-27
25	4LNT\|1\|YB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	120	2014-08-06
26	6CFJ\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	120	2018-03-07
27	4WQF\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	120	2015-01-28
28	5IB7\|1\|1J	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	122	2016-05-25
29	4V8D\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	122	2014-07-09
30	4V8G\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	120	2014-07-09
31	4W2G\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	120	2014-10-15
32	5J4C\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	120	2016-04-27
33	4Z8C\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	120	2015-05-20
34	5J4B\|1\|2B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	120	2016-04-27
35	6CFL\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-ray diffraction	2.6	120	2018-03-07
36	4V9R\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	120	2014-07-09
37	5HD1\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	120	2016-04-06
38	5HCP\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	120	2016-04-06
39	4V9H\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-ray diffraction	2.86	119	2014-07-09
40	4W2I\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	120	2014-10-15
41	4V8D\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	122	2014-07-09
42	5WIS\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	120	2018-02-14
43	4Z3S\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	120	2015-06-03
44	4WQY\|1\|AB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	120	2015-01-28
45	6CAE\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	120	2018-04-18
46	4Z8C\|1\|2B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	120	2015-05-20
47	4LNT\|1\|RB	5S ribosomal RNA	5S rRNA	Thermus thermophilus	Bacteria	RF00001	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	120	2014-08-06
48	1VY4\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	120	2014-08-20
49	5HAU\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	120	2016-04-06
50	4WPO\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	120	2015-01-28
51	4V8B\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	122	2014-07-09
52	5J8B\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.6	120	2016-05-25
53	4W2H\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	120	2014-10-15
54	4WSD\|1\|1J	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	122	2015-06-10
55	6CFK\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-ray diffraction	2.7	120	2018-03-07
56	5J4C\|1\|2B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	120	2016-04-27
57	5HAU\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	120	2016-04-06
58	5HCQ\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-04-06
59	1VY7\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	120	2014-08-20
60	4W2F\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	120	2014-10-15
61	5WIT\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	120	2018-02-14
62	6CFJ\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	120	2018-03-07
63	5W4K\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	120	2017-08-30
64	1VY5\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	120	2014-08-20
65	4W2I\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	120	2014-10-15
66	4Y4P\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	120	2015-03-18
67	5DOY\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	120	2015-12-30
68	4V8G\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	120	2014-07-09
69	4W2G\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	120	2014-10-15
70	4WQF\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	120	2015-01-28
71	5HCR\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-04-06
72	4Z3S\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	120	2015-06-03
73	4V9R\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	120	2014-07-09
74	5HD1\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	120	2016-04-06
75	6ND6\|1\|1B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	120	2019-02-20
76	4W2F\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	120	2014-10-15
77	1VY6\|1\|BB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	120	2014-08-20
78	5WIS\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	120	2018-02-14
79	4WQU\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	120	2015-01-28
80	1VY4\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	120	2014-08-20
81	4WQY\|1\|CB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	120	2015-01-28
82	4V8B\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	122	2014-07-09
83	5F8K\|1\|1B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-02-03
84	5DOY\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	120	2015-12-30
85	4V90\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Thermus thermophilus Ribosome	X-ray diffraction	2.95	119	2014-07-09
86	5HCP\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	120	2016-04-06
87	4Y4P\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	120	2015-03-18
88	4W2H\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	120	2014-10-15
89	4V51\|1\|BB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	119	2014-07-09
90	1VY5\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	120	2014-08-20
91	4W2E\|1\|B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	120	2014-10-01
92	6ND6\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	120	2019-02-20
93	4V51\|1\|DB	5S ribosomal RNA	5S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	119	2014-07-09
94	5WIT\|1\|2B	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	120	2018-02-14
95	4V8I\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	120	2014-07-09
96	4V7L\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	118	2014-07-09
97	1VY6\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	120	2014-08-20
98	1VY7\|1\|DB	5S ribosomal RNA	5S Ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	120	2014-08-20
99	4V7L\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	118	2014-07-09
100	5F8K\|1\|2B	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	120	2016-02-03
101	4V7Y\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	119	2014-07-09
102	4V67\|1\|BB	5S ribosomal RNA	5S RRNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	119	2014-07-09
103	4V7X\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	119	2014-07-09
104	4V7W\|1\|BB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	119	2014-07-09
105	4V7Y\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	119	2014-07-09
106	4V67\|1\|DB	5S ribosomal RNA	5S RRNA	Thermus thermophilus	Bacteria	RF00001	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	119	2014-07-09
107	4V7W\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	119	2014-07-09
108	4V7X\|1\|DB	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	119	2014-07-09
109	6GSJ\|1\|16	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	122	2018-07-04
110	6GSJ\|1\|1J	5S ribosomal RNA	5S ribosomal RNA	Thermus thermophilus	Bacteria	RF00001	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	122	2018-07-04

Release history

Release	3.62
Date	2019-02-22

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_42622.38	NR_3.0_42622.37	3.62	(108) 1VY4\|1\|BB, 1VY4\|1\|DB, 1VY5\|1\|BB, 1VY5\|1\|DB, 1VY6\|1\|BB, 1VY6\|1\|DB, 1VY7\|1\|BB, 1VY7\|1\|DB, 4LNT\|1\|RB, 4LNT\|1\|YB, 4V51\|1\|BB, 4V51\|1\|DB, 4V67\|1\|BB, 4V67\|1\|DB, 4V7L\|1\|BB, 4V7L\|1\|DB, 4V7W\|1\|BB, 4V7W\|1\|DB, 4V7X\|1\|BB, 4V7X\|1\|DB, 4V7Y\|1\|BB, 4V7Y\|1\|DB, 4V8B\|1\|BB, 4V8B\|1\|DB, 4V8D\|1\|BB, 4V8D\|1\|DB, 4V8G\|1\|BB, 4V8G\|1\|DB, 4V8I\|1\|BB, 4V8I\|1\|DB, 4V90\|1\|BB, 4V9H\|1\|BB, 4V9R\|1\|BB, 4V9R\|1\|DB, 4W2E\|1\|B, 4W2F\|1\|BB, 4W2F\|1\|DB, 4W2G\|1\|BB, 4W2G\|1\|DB, 4W2H\|1\|BB, 4W2H\|1\|DB, 4W2I\|1\|BB, 4W2I\|1\|DB, 4WPO\|1\|AB, 4WPO\|1\|CB, 4WQF\|1\|AB, 4WQF\|1\|CB, 4WQU\|1\|AB, 4WQU\|1\|CB, 4WQY\|1\|AB, 4WQY\|1\|CB, 4WSD\|1\|16, 4WSD\|1\|1J, 4Y4O\|1\|1B, 4Y4O\|1\|2B, 4Y4P\|1\|1B, 4Y4P\|1\|2B, 4Z3S\|1\|1B, 4Z3S\|1\|2B, 4Z8C\|1\|1B, 4Z8C\|1\|2B, 5DOY\|1\|1B, 5DOY\|1\|2B, 5E81\|1\|16, 5E81\|1\|1J, 5F8K\|1\|1B, 5F8K\|1\|2B, 5FDU\|1\|1B, 5FDU\|1\|2B, 5FDV\|1\|1B, 5FDV\|1\|2B, 5HAU\|1\|1B, 5HAU\|1\|2B, 5HCP\|1\|1B, 5HCP\|1\|2B, 5HCQ\|1\|1B, 5HCQ\|1\|2B, 5HCR\|1\|1B, 5HCR\|1\|2B, 5HD1\|1\|1B, 5HD1\|1\|2B, 5IB7\|1\|16, 5IB7\|1\|1J, 5IBB\|1\|16, 5IBB\|1\|1J, 5J4B\|1\|1B, 5J4B\|1\|2B, 5J4C\|1\|1B, 5J4C\|1\|2B, 5J8B\|1\|B, 5NDK\|1\|16, 5NDK\|1\|1J, 5W4K\|1\|1B, 5W4K\|1\|2B, 5WIS\|1\|1B, 5WIS\|1\|2B, 5WIT\|1\|1B, 5WIT\|1\|2B, 6CAE\|1\|1B, 6CAE\|1\|2B, 6CFJ\|1\|1B, 6CFJ\|1\|2B, 6CFK\|1\|1B, 6CFK\|1\|2B, 6CFL\|1\|1B, 6CFL\|1\|2B, 6GSJ\|1\|16, 6GSJ\|1\|1J	(2) 6ND6\|1\|1B, 6ND6\|1\|2B	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_42622.38	NR_3.0_42622.39	3.63	(110) 1VY4\|1\|BB, 1VY4\|1\|DB, 1VY5\|1\|BB, 1VY5\|1\|DB, 1VY6\|1\|BB, 1VY6\|1\|DB, 1VY7\|1\|BB, 1VY7\|1\|DB, 4LNT\|1\|RB, 4LNT\|1\|YB, 4V51\|1\|BB, 4V51\|1\|DB, 4V67\|1\|BB, 4V67\|1\|DB, 4V7L\|1\|BB, 4V7L\|1\|DB, 4V7W\|1\|BB, 4V7W\|1\|DB, 4V7X\|1\|BB, 4V7X\|1\|DB, 4V7Y\|1\|BB, 4V7Y\|1\|DB, 4V8B\|1\|BB, 4V8B\|1\|DB, 4V8D\|1\|BB, 4V8D\|1\|DB, 4V8G\|1\|BB, 4V8G\|1\|DB, 4V8I\|1\|BB, 4V8I\|1\|DB, 4V90\|1\|BB, 4V9H\|1\|BB, 4V9R\|1\|BB, 4V9R\|1\|DB, 4W2E\|1\|B, 4W2F\|1\|BB, 4W2F\|1\|DB, 4W2G\|1\|BB, 4W2G\|1\|DB, 4W2H\|1\|BB, 4W2H\|1\|DB, 4W2I\|1\|BB, 4W2I\|1\|DB, 4WPO\|1\|AB, 4WPO\|1\|CB, 4WQF\|1\|AB, 4WQF\|1\|CB, 4WQU\|1\|AB, 4WQU\|1\|CB, 4WQY\|1\|AB, 4WQY\|1\|CB, 4WSD\|1\|16, 4WSD\|1\|1J, 4Y4O\|1\|1B, 4Y4O\|1\|2B, 4Y4P\|1\|1B, 4Y4P\|1\|2B, 4Z3S\|1\|1B, 4Z3S\|1\|2B, 4Z8C\|1\|1B, 4Z8C\|1\|2B, 5DOY\|1\|1B, 5DOY\|1\|2B, 5E81\|1\|16, 5E81\|1\|1J, 5F8K\|1\|1B, 5F8K\|1\|2B, 5FDU\|1\|1B, 5FDU\|1\|2B, 5FDV\|1\|1B, 5FDV\|1\|2B, 5HAU\|1\|1B, 5HAU\|1\|2B, 5HCP\|1\|1B, 5HCP\|1\|2B, 5HCQ\|1\|1B, 5HCQ\|1\|2B, 5HCR\|1\|1B, 5HCR\|1\|2B, 5HD1\|1\|1B, 5HD1\|1\|2B, 5IB7\|1\|16, 5IB7\|1\|1J, 5IBB\|1\|16, 5IBB\|1\|1J, 5J4B\|1\|1B, 5J4B\|1\|2B, 5J4C\|1\|1B, 5J4C\|1\|2B, 5J8B\|1\|B, 5NDK\|1\|16, 5NDK\|1\|1J, 5W4K\|1\|1B, 5W4K\|1\|2B, 5WIS\|1\|1B, 5WIS\|1\|2B, 5WIT\|1\|1B, 5WIT\|1\|2B, 6CAE\|1\|1B, 6CAE\|1\|2B, 6CFJ\|1\|1B, 6CFJ\|1\|2B, 6CFK\|1\|1B, 6CFK\|1\|2B, 6CFL\|1\|1B, 6CFL\|1\|2B, 6GSJ\|1\|16, 6GSJ\|1\|1J, 6ND6\|1\|1B, 6ND6\|1\|2B	(0)	(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	4V9H\|1\|BB	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-RAY DIFFRACTION	2.86	119
2	4V90\|1\|BB	Thermus thermophilus Ribosome	X-RAY DIFFRACTION	2.95	119
3	4V67\|1\|DB	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	119
4	4V67\|1\|BB	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	119
5	4W2E\|1\|B	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	120
6	4WQU\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	120
7	5WIT\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
8	5J4C\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	120
9	5J4B\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
10	6CFJ\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	120
11	4Y4P\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	120
12	5WIS\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	120
13	5W4K\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	120
14	6CAE\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
15	6ND6\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	120
16	5DOY\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
17	1VY4\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	120
18	5HCQ\|1\|2B	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
19	5HCR\|1\|2B	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
20	5HCP\|1\|2B	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	120
21	5HD1\|1\|2B	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	120
22	4Z8C\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	120
23	1VY6\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	120
24	1VY7\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	120
25	4W2H\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	120
26	4W2I\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	120
27	4Z3S\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	120
28	4V9R\|1\|DB	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	120
29	1VY5\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	120
30	4W2G\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	120
31	4W2F\|1\|DB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	120
32	4WPO\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	120
33	4WQY\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	120
34	4WQF\|1\|CB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	120
35	5HAU\|1\|2B	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	120
36	5F8K\|1\|2B	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
37	5FDU\|1\|2B	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	120
38	5FDV\|1\|2B	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
39	6CFL\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
40	6CFK\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-RAY DIFFRACTION	2.7	120
41	4Y4O\|1\|2B	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	120
42	4V8G\|1\|DB	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	120
43	4V8G\|1\|BB	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	120
44	4V8I\|1\|DB	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	120
45	4V8I\|1\|BB	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	120
46	5FDU\|1\|1B	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	120
47	5FDV\|1\|1B	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
48	4Y4O\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	120
49	6CFK\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-RAY DIFFRACTION	2.7	120
50	6CFL\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
51	5F8K\|1\|1B	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
52	5HCP\|1\|1B	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	120
53	4Z8C\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	120
54	5HCQ\|1\|1B	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
55	5HCR\|1\|1B	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	120
56	5HD1\|1\|1B	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	120
57	4V9R\|1\|BB	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	120
58	1VY6\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	120
59	4Z3S\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	120
60	4W2G\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	120
61	1VY5\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	120
62	1VY4\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	120
63	6CAE\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
64	5W4K\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	120
65	5WIS\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	120
66	4W2F\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	120
67	4Y4P\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	120
68	5J4B\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
69	5J4C\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	120
70	6CFJ\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	120
71	5WIT\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
72	4WPO\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	120
73	4WQU\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	120
74	4WQF\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	120
75	4WQY\|1\|AB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	120
76	5J8B\|1\|B	Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.6	120
77	5HAU\|1\|1B	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	120
78	1VY7\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	120
79	4W2H\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	120
80	5DOY\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	120
81	4W2I\|1\|BB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	120
82	6ND6\|1\|1B	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	120
83	5NDK\|1\|16	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	122
84	4LNT\|1\|YB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	120
85	6GSJ\|1\|16	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	122
86	5IB7\|1\|16	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	122
87	5E81\|1\|16	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-RAY DIFFRACTION	2.95	122
88	5IBB\|1\|16	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	122
89	4WSD\|1\|16	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	122
90	4V8B\|1\|BB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	122
91	4V8D\|1\|BB	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	122
92	4LNT\|1\|RB	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	120
93	4V7Y\|1\|DB	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	119
94	4V7Y\|1\|BB	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	119
95	4V7X\|1\|BB	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	119
96	4V7X\|1\|DB	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	119
97	4V7W\|1\|BB	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	119
98	4V7W\|1\|DB	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	119
99	4V51\|1\|BB	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	119
100	4V51\|1\|DB	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	119
101	4V7L\|1\|BB	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	118
102	4V7L\|1\|DB	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	118
103	4V8B\|1\|DB	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	122
104	4V8D\|1\|DB	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	122
105	5NDK\|1\|1J	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	122
106	4WSD\|1\|1J	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	122
107	6GSJ\|1\|1J	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	122
108	5IB7\|1\|1J	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	122
109	5E81\|1\|1J	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-RAY DIFFRACTION	2.95	122
110	5IBB\|1\|1J	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	122

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_42622.38 Obsolete

Release history

Parents

Children