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Equivalence class NR_3.0_52752.12 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16ZMI|1|L7 (rep)5S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.62020-08-19
26ZM7|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.72020-07-29
37F5S|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human delta-METTL18 60S ribosomeElectron microscopy2.722022-06-22
46XA1|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.82020-10-07
56Y6X|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Tetracenomycin X bound to the human ribosomeElectron microscopy2.82020-07-08
66Z6N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.92020-07-29
76QZP|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92019-04-24
86Z6L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy32020-07-29
96ZME|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy32020-08-12
106Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy32020-04-15

Release history

Release3.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.250
Date2022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_52752.12NR_3.0_52752.113.236(9) 6ZMI|1|L7, 6ZME|1|L7, 6ZM7|1|L7, 6Z6N|1|L7, 6Z6L|1|L7, 6Y6X|1|L7, 6Y2L|1|L7, 6XA1|1|L7, 6QZP|1|L7(1) 7F5S|1|L7(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_52752.12NR_3.0_52752.133.251(10) 6Y6X|1|L7, 6Y2L|1|L7, 6XA1|1|L7, 6QZP|1|L7, 7F5S|1|L7, 6ZMI|1|L7, 6ZME|1|L7, 6ZM7|1|L7, 6Z6N|1|L7, 6Z6L|1|L7(0) (1) 7OW7|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17F5S|1|L7human delta-METTL18 60S ribosomeELECTRON MICROSCOPY2.72120
26Y6X|1|L7Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.8120
36Z6N|1|L7Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.9120
46Z6L|1|L7Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY3120
56ZME|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY3120
66ZM7|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.7120
76ZMI|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.6120
86XA1|1|L7Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.8120
96QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
106Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
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