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Equivalence class NR_3.0_52752.14 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17OW7|1|B (rep)5S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001EIF6-bound large subunit of the human ribosomeElectron microscopy2.22022-10-05
26ZMI|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexElectron microscopy2.62020-08-19
36ZM7|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexElectron microscopy2.72020-07-29
47F5S|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001human delta-METTL18 60S ribosomeElectron microscopy2.722022-06-22
56XA1|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Structure of a drug-like compound stalled human translation termination complexElectron microscopy2.82020-10-07
66Y6X|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Tetracenomycin X bound to the human ribosomeElectron microscopy2.82020-07-08
76Z6N|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)Electron microscopy2.92020-07-29
86QZP|1|L75S ribosomal RNA5S rRNA (120-MER)Homo sapiensEukaryaRF00001High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92019-04-24
96Z6L|1|L75S ribosomal RNA5S rRNAHomo sapiensEukaryaRF00001Cryo-EM structure of human CCDC124 bound to 80S ribosomesElectron microscopy32020-07-29
106ZME|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexElectron microscopy32020-08-12
117QVP|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy32022-10-12
127QVP|1|L95S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Human collided disome (di-ribosome) stalled on XBP1 mRNAElectron microscopy32022-10-12
136Y2L|1|L75S ribosomal RNA5S ribosomal RNAHomo sapiensEukaryaRF00001Structure of human ribosome in POST stateElectron microscopy32020-04-15

Release history

Release3.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.272
Date2022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-01

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_52752.14NR_3.0_52752.133.252(11) 6Z6L|1|L7, 6Y6X|1|L7, 6Y2L|1|L7, 6XA1|1|L7, 6QZP|1|L7, 7OW7|1|B, 7F5S|1|L7, 6ZMI|1|L7, 6ZME|1|L7, 6ZM7|1|L7, 6Z6N|1|L7(2) 7QVP|1|L7, 7QVP|1|L9(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_52752.14NR_3.0_52752.153.273(13) 6Z6N|1|L7, 6Z6L|1|L7, 6Y6X|1|L7, 6Y2L|1|L7, 6XA1|1|L7, 6QZP|1|L7, 7QVP|1|L9, 7QVP|1|L7, 7OW7|1|B, 7F5S|1|L7, 6ZMI|1|L7, 6ZME|1|L7, 6ZM7|1|L7(0) (1) 8A3D|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17F5S|1|L7human delta-METTL18 60S ribosomeELECTRON MICROSCOPY2.72120
26Y6X|1|L7Tetracenomycin X bound to the human ribosomeELECTRON MICROSCOPY2.8120
36Z6L|1|L7Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY3120
46Z6N|1|L7Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.9120
56ZMI|1|L7SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.6120
66ZM7|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.7120
76ZME|1|L7SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY3120
86XA1|1|L7Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.8120
96QZP|1|L7High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.9120
107OW7|1|BEIF6-bound large subunit of the human ribosomeELECTRON MICROSCOPY2.2120
116Y2L|1|L7Structure of human ribosome in POST stateELECTRON MICROSCOPY3120
127QVP|1|L7Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
137QVP|1|L9Human collided disome (di-ribosome) stalled on XBP1 mRNAELECTRON MICROSCOPY3120
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