Equivalence class NR_3.0_76703.7 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5E81|1|1K (rep) | Transfer RNA | tRNA-Lys, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-ray diffraction | 2.95 | 2016-01-27 |
| 2 | 5IB7|1|1K | Transfer RNA | tRNALys, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
| 3 | 5E81|1|1L | Transfer RNA | tRNA-Lys, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-ray diffraction | 2.95 | 2016-01-27 |
| 4 | 5IB7|1|1L | Transfer RNA | tRNALys, mRNA | Escherichia coli | Bacteria | RF00005 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
| 5 | 7N1P|1|Pt | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | Electron microscopy | 2.33 | 2021-07-14 |
| 6 | 7N2U|1|Pt | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation | Electron microscopy | 2.53 | 2021-07-14 |
| 7 | 7N30|1|Pt | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation | Electron microscopy | 2.66 | 2021-07-14 |
| 8 | 7N31|1|Pt | Transfer RNA | tRNA, mRNA | Escherichia coli K-12 | Bacteria | RF00005 | Elongating 70S ribosome complex in a post-translocation (POST) conformation | Electron microscopy | 2.69 | 2021-07-14 |
| 9 | 7N2C|1|Pt | Transfer RNA | Chains: Pt, Chains: mR | Escherichia coli | Bacteria | RF00005 | Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2) | Electron microscopy | 2.72 | 2021-07-14 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7N30|1|Pt | Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation | ELECTRON MICROSCOPY | 2.66 | 66 |
| 2 | 7N2U|1|Pt | Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation | ELECTRON MICROSCOPY | 2.53 | 67 |
| 3 | 7N2C|1|Pt | Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2) | ELECTRON MICROSCOPY | 2.72 | 67 |
| 4 | 7N31|1|Pt | Elongating 70S ribosome complex in a post-translocation (POST) conformation | ELECTRON MICROSCOPY | 2.69 | 67 |
| 5 | 7N1P|1|Pt | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | ELECTRON MICROSCOPY | 2.33 | 67 |
| 6 | 5E81|1|1K | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 67 |
| 7 | 5IB7|1|1K | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-RAY DIFFRACTION | 2.99 | 67 |
| 8 | 5E81|1|1L | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 64 |
| 9 | 5IB7|1|1L | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-RAY DIFFRACTION | 2.99 | 66 |