Equivalence class NR_3.0_81965.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6N6D|1|D (rep) | RNA (5'-R(P*AP*G)-3') | synthetic construct | Synthetic | Vibrio cholerae Oligoribonuclease bound to pAG | X-ray diffraction | 1.53 | 2019-06-12 | ||
| 2 | 6N6K|1|C | RNA (5'-R(P*AP*G)-3') | synthetic construct | Synthetic | Human REXO2 bound to pAG | X-ray diffraction | 1.42 | 2019-06-12 | ||
| 3 | 6N6K|1|D | RNA (5'-R(P*AP*G)-3') | synthetic construct | Synthetic | Human REXO2 bound to pAG | X-ray diffraction | 1.42 | 2019-06-12 | ||
| 4 | 7MW8|1|J | pApG | synthetic construct | Synthetic | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-ray diffraction | 1.9 | 2022-05-18 | ||
| 5 | 7MW8|1|K | pApG | synthetic construct | Synthetic | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-ray diffraction | 1.9 | 2022-05-18 | ||
| 6 | 7MW8|1|L | pApG | synthetic construct | Synthetic | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-ray diffraction | 1.9 | 2022-05-18 | ||
| 7 | 7MW8|1|M | pApG | synthetic construct | Synthetic | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-ray diffraction | 1.9 | 2022-05-18 | ||
| 8 | 7MW8|1|N | pApG | synthetic construct | Synthetic | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-ray diffraction | 1.9 | 2022-05-18 | ||
| 9 | 7MW8|1|O | pApG | synthetic construct | Synthetic | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-ray diffraction | 1.9 | 2022-05-18 | ||
| 10 | 3RTJ|1|D | RNA (5'-R(*AP*G)-3') | Crystal structure of ricin bound with dinucleotide ApG | X-ray diffraction | 3 | 2011-08-31 | ||||
| 11 | 6TY9|1|M | Transcript | Cypovirus 1 | Viruses | In situ structure of BmCPV RNA dependent RNA polymerase at initiation state | Electron microscopy | 2.9 | 2019-11-20 |
Release history
| Release | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6TY9|1|M | In situ structure of BmCPV RNA dependent RNA polymerase at initiation state | ELECTRON MICROSCOPY | 2.9 | 1 |
| 2 | 7MW8|1|M | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-RAY DIFFRACTION | 1.9 | 1 |
| 3 | 7MW8|1|L | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-RAY DIFFRACTION | 1.9 | 1 |
| 4 | 6N6K|1|C | Human REXO2 bound to pAG | X-RAY DIFFRACTION | 1.42 | 3 |
| 5 | 6N6K|1|D | Human REXO2 bound to pAG | X-RAY DIFFRACTION | 1.42 | 3 |
| 6 | 3RTJ|1|D | Crystal structure of ricin bound with dinucleotide ApG | X-RAY DIFFRACTION | 3 | 2 |
| 7 | 7MW8|1|O | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-RAY DIFFRACTION | 1.9 | 1 |
| 8 | 7MW8|1|N | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-RAY DIFFRACTION | 1.9 | 1 |
| 9 | 7MW8|1|K | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-RAY DIFFRACTION | 1.9 | 1 |
| 10 | 7MW8|1|J | Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase | X-RAY DIFFRACTION | 1.9 | 2 |
| 11 | 6N6D|1|D | Vibrio cholerae Oligoribonuclease bound to pAG | X-RAY DIFFRACTION | 1.53 | 2 |