Equivalence class NR_3.0_83717.97 Obsolete
# | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
---|---|---|---|---|---|---|---|
1 | 5J7L|1|DA (rep) | 23S rRNA | Escherichia coli | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 2016-07-27 |
2 | 4YBB|1|DA | 23S rRNA | Escherichia coli | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2015-03-18 |
3 | 4WOI|1|BA | 23S ribosomal RNA | Escherichia coli | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2015-08-05 |
4 | 4WOI|1|CA | 23S ribosomal RNA | Escherichia coli | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2015-08-05 |
5 | 6I7V|1|DA | 23S ribosomal RNA | Escherichia coli | Ribosomal protein paralogs bL31 and bL36 | X-RAY DIFFRACTION | 2.9 | 2018-12-05 |
6 | 5J91|1|DA | 23S rRNA | Escherichia coli | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 2016-07-06 |
7 | 4V9P|1|EA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
8 | 4V9P|1|CA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
9 | 4V9P|1|GA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
10 | 4V9P|1|AA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
11 | 4V9D|1|CA | 23S rRNA | Escherichia coli | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2014-07-09 |
12 | 4V9O|1|AA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
13 | 4V9O|1|EA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
14 | 4V9O|1|CA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
15 | 5J7L|1|CA | 23S rRNA | Escherichia coli | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 2016-07-27 |
16 | 4U27|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
17 | 4U24|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
18 | 4U25|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
19 | 4V9D|1|DA | 23S rRNA | Escherichia coli | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2014-07-09 |
20 | 4U26|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
21 | 4V9O|1|GA | 23S rRNA | Escherichia coli | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2014-07-09 |
22 | 4U1U|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2014-07-30 |
23 | 4YBB|1|CA | 23S rRNA | Escherichia coli | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2015-03-18 |
24 | 4U1V|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2014-07-30 |
25 | 4U20|1|BA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
26 | 6I7V|1|CA | 23S ribsomal RNA | Escherichia coli | Ribosomal protein paralogs bL31 and bL36 | X-RAY DIFFRACTION | 2.9 | 2018-12-05 |
27 | 4U27|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
28 | 4U25|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
29 | 4U1U|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2014-07-30 |
30 | 4U1V|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2014-07-30 |
31 | 4U24|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
32 | 4U26|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2014-07-30 |
33 | 4U20|1|DA | 23S rRNA | Escherichia coli | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2014-07-30 |
34 | 5J91|1|CA | 23S rRNA | Escherichia coli | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 2016-07-06 |
35 | 5J5B|1|DA | 23S rRNA | Escherichia coli | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 2016-07-27 |
36 | 5J5B|1|CA | 23S rRNA | Escherichia coli | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 2016-07-27 |
37 | 6HRM|1|1 | stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA | Escherichia coli | E. coli 70S d2d8 stapled ribosome | ELECTRON MICROSCOPY | 2.96 | 2018-12-19 |
38 | 7K00|1|a | 23S rRNA | Escherichia coli | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2020-09-23 |
39 | 6XZ7|1|A | 23S rRNA | Escherichia coli | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | ELECTRON MICROSCOPY | 2.1 | 2020-07-22 |
40 | 7LVK|1|I | 23S rRNA | Escherichia coli | Cfr-modified 50S subunit from Escherichia coli | ELECTRON MICROSCOPY | 2.2 | 2021-12-15 |
41 | 6PJ6|1|I | 23S rRNA | Escherichia coli | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 2020-01-22 |
42 | 7N1P|1|23 | 23S rRNA | Escherichia coli K-12 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | ELECTRON MICROSCOPY | 2.33 | 2021-07-14 |
43 | 7PJS|1|A | 23S ribosomal RNA | Escherichia coli | Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) | ELECTRON MICROSCOPY | 2.35 | 2021-10-20 |
44 | 7S1H|1|I | 23S rRNA | Escherichia coli | Wild-type Escherichia coli ribosome with antibiotic linezolid | ELECTRON MICROSCOPY | 2.35 | 2021-11-17 |
45 | 7S1K|1|I | 23S rRNA | Escherichia coli | Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid | ELECTRON MICROSCOPY | 2.42 | 2022-01-19 |
46 | 7O1A|1|BA | Ribosomal RNA 23S | Escherichia coli K-12 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.4 | 2021-09-01 |
47 | 7S1J|1|I | 23S rRNA | Escherichia coli | Wild-type Escherichia coli ribosome with antibiotic radezolid | ELECTRON MICROSCOPY | 2.47 | 2022-03-02 |
48 | 7S1I|1|I | 23S rRNA | Escherichia coli | Wild-type Escherichia coli stalled ribosome with antibiotic radezolid | ELECTRON MICROSCOPY | 2.48 | 2022-03-02 |
49 | 7S1G|1|I | 23S rRNA | Escherichia coli | wild-type Escherichia coli stalled ribosome with antibiotic linezolid | ELECTRON MICROSCOPY | 2.48 | 2021-11-17 |
50 | 7BL4|1|A | 23S ribosomal RNA | Escherichia coli K-12 | in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle | ELECTRON MICROSCOPY | 2.4 | 2021-05-12 |
51 | 7N2U|1|23 | 23S rRNA | Escherichia coli K-12 | Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation | ELECTRON MICROSCOPY | 2.53 | 2021-07-14 |
52 | 7N2V|1|23 | 23S rRNA | Escherichia coli K-12 | Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1) | ELECTRON MICROSCOPY | 2.54 | 2021-07-14 |
53 | 6YS3|1|b | 23S rRNA | Escherichia coli | Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide | ELECTRON MICROSCOPY | 2.58 | 2020-09-30 |
54 | 7UG7|1|23 | 23S rRNA | Escherichia coli | 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B | ELECTRON MICROSCOPY | 2.58 | 2022-05-18 |
55 | 6YSS|1|A | 23S ribosomal RNA | Escherichia coli | Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state | ELECTRON MICROSCOPY | 2.6 | 2020-08-19 |
56 | 6PCR|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 40o | ELECTRON MICROSCOPY | 2.5 | 2020-06-17 |
57 | 6PC6|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 47 | ELECTRON MICROSCOPY | 2.5 | 2020-06-17 |
58 | 6PC7|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 46 | ELECTRON MICROSCOPY | 2.5 | 2020-06-17 |
59 | 7NWT|1|1 | 23S ribosomal RNA | Escherichia coli | Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV) | ELECTRON MICROSCOPY | 2.66 | 2021-12-15 |
60 | 7N30|1|23 | 23S rRNA | Escherichia coli K-12 | Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation | ELECTRON MICROSCOPY | 2.66 | 2021-07-14 |
61 | 6XZB|1|A2 | 23S rRNA | Escherichia coli K-12 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | ELECTRON MICROSCOPY | 2.54 | 2020-11-04 |
62 | 7N31|1|23 | 23S rRNA | Escherichia coli K-12 | Elongating 70S ribosome complex in a post-translocation (POST) conformation | ELECTRON MICROSCOPY | 2.69 | 2021-07-14 |
63 | 7O1C|1|BA | Ribosomal RNA 23S | Escherichia coli K-12 | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.6 | 2021-09-01 |
64 | 6TBV|1|23S1 | 23S rRNA | Escherichia coli | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2) | ELECTRON MICROSCOPY | 2.7 | 2020-01-01 |
65 | 6TC3|1|23S1 | 23S rRNA | Escherichia coli | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) | ELECTRON MICROSCOPY | 2.7 | 2020-01-01 |
66 | 6PCQ|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to VM2 | ELECTRON MICROSCOPY | 2.6 | 2020-06-17 |
67 | 7N2C|1|23 | 23S rRNA | Escherichia coli K-12 | Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2) | ELECTRON MICROSCOPY | 2.72 | 2021-07-14 |
68 | 6XZA|1|A2 | 23S rRNA | Escherichia coli K-12 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | ELECTRON MICROSCOPY | 2.66 | 2020-11-04 |
69 | 6QDW|1|b | 23S rRNA | Escherichia coli | Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide | ELECTRON MICROSCOPY | 2.83 | 2020-01-15 |
70 | 6PC5|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compounds 46 and VS1 | ELECTRON MICROSCOPY | 2.7 | 2020-06-17 |
71 | 7NSO|1|A | 23S rRNA (2903-MER) | Escherichia coli | Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA | ELECTRON MICROSCOPY | 2.9 | 2021-07-14 |
72 | 7ST2|1|1 | 23S rRNA | Escherichia coli K-12 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | ELECTRON MICROSCOPY | 2.9 | 2022-02-23 |
73 | 7OT5|1|1 | 23S rRNA | Escherichia coli | CspA-70 cotranslational folding intermediate 1 | ELECTRON MICROSCOPY | 2.9 | 2022-01-19 |
74 | 7OTC|1|A | 23S ribosomal RNA | Escherichia coli BL21(DE3) | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B | ELECTRON MICROSCOPY | 2.9 | 2022-05-11 |
75 | 5AFI|1|A | 23S ribosomal RNA | Escherichia coli | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 2015-03-11 |
76 | 7B5K|1|A | 23S rRNA | Escherichia coli K-12 | E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain. | ELECTRON MICROSCOPY | 2.9 | 2021-05-26 |
77 | 6WYV|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compounds 47 and VS1 | ELECTRON MICROSCOPY | 2.75 | 2020-06-17 |
78 | 6PCT|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 41q | ELECTRON MICROSCOPY | 2.8 | 2020-06-17 |
79 | 6U48|1|CA | 23S rRNA | Escherichia coli | E. coli 50S with phazolicin (PHZ) bound in exit tunnel | ELECTRON MICROSCOPY | 2.87 | 2019-09-18 |
80 | 6Y69|1|A | 23S ribosomal RNA | Escherichia coli | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | ELECTRON MICROSCOPY | 2.86 | 2020-07-01 |
81 | 6PCS|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 40e | ELECTRON MICROSCOPY | 2.8 | 2020-06-17 |
82 | 7O19|1|BA | Ribosomal RNA 23S | Escherichia coli K-12 | Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.9 | 2021-09-01 |
83 | 7ST6|1|1 | 23S rRNA | Escherichia coli K-12 | Pre translocation, non-rotated 70S ribosome (Structure I) | ELECTRON MICROSCOPY | 3 | 2022-02-23 |
84 | 7TOS|1|23S | 23S ribosomal RNA | Escherichia coli | E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20 | ELECTRON MICROSCOPY | 2.9 | 2022-05-25 |
85 | 5NWY|1|N | 23S rRNA | Escherichia coli | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | ELECTRON MICROSCOPY | 2.9 | 2017-07-19 |
86 | 6WD0|1|1 | 23S ribosomal RNA | Escherichia coli | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | ELECTRON MICROSCOPY | 3 | 2020-07-01 |
87 | 7OII|1|1 | 23S rRNA | Escherichia coli | CspA-70 cotranslational folding intermediate 2 | ELECTRON MICROSCOPY | 3 | 2022-01-19 |
88 | 7OIF|1|1 | 23S rRNA | Escherichia coli | CspA-27 cotranslational folding intermediate 2 | ELECTRON MICROSCOPY | 3 | 2022-01-19 |
89 | 6WDE|1|1 | 23S ribosomal RNA | Escherichia coli | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | ELECTRON MICROSCOPY | 3 | 2020-07-01 |
90 | 7OIZ|1|a | 23S rRNA | Escherichia coli K-12 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | ELECTRON MICROSCOPY | 2.9 | 2021-09-15 |
91 | 7P3K|1|a | 23S rRNA | Escherichia coli K-12 | Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) | ELECTRON MICROSCOPY | 2.9 | 2021-10-27 |
92 | 6ORE|1|1 | 23S ribosomal RNA | Escherichia coli | Release complex 70S | ELECTRON MICROSCOPY | 2.9 | 2019-06-19 |
93 | 6PC8|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 40q | ELECTRON MICROSCOPY | 2.9 | 2020-06-17 |
94 | 5MDV|1|1 | 23S ribosomal RNA | Escherichia coli | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | ELECTRON MICROSCOPY | 2.97 | 2016-12-14 |
95 | 6H4N|1|A | 23S ribosomal RNA | Escherichia coli | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | ELECTRON MICROSCOPY | 3 | 2018-09-05 |
96 | 6ZU1|1|BA | 23S ribosomal RNA | Escherichia coli | E. coli 70S-RNAP expressome complex in uncoupled state 2 | ELECTRON MICROSCOPY | 3 | 2020-09-16 |
97 | 6ZTO|1|BA | 23S ribosomal RNA | Escherichia coli | E. coli 70S-RNAP expressome complex in uncoupled state 1 | ELECTRON MICROSCOPY | 3 | 2020-09-23 |
98 | 6ZTP|1|BA | 23S ribosomal RNA | Escherichia coli | E. coli 70S-RNAP expressome complex in uncoupled state 6 | ELECTRON MICROSCOPY | 3 | 2020-09-16 |
99 | 6PCH|1|I | 23S ribosomal RNA | Escherichia coli | E. coli 50S ribosome bound to compound 21 | ELECTRON MICROSCOPY | 2.9 | 2020-06-17 |
100 | 6QUL|1|A | 23S rRNA, P-site fMet-tRNA(fMet) | Escherichia coli | Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid | ELECTRON MICROSCOPY | 3 | 2019-04-10 |
101 | 5WFS|1|A | 23S rRNA | Escherichia coli | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | ELECTRON MICROSCOPY | 3 | 2018-05-02 |
102 | 5WDT|1|A | 23S rRNA | Escherichia coli | 70S ribosome-EF-Tu H84A complex with GppNHp | ELECTRON MICROSCOPY | 3 | 2018-04-25 |
103 | 5IQR|1|1 | LSU rRNA | Escherichia coli | Structure of RelA bound to the 70S ribosome | ELECTRON MICROSCOPY | 3 | 2016-05-04 |
104 | 7ODE|1|I | 23S rRNA | Escherichia coli K-12 | E. coli 50S ribosome LiCl core particle | ELECTRON MICROSCOPY | 2.84 | 2022-06-01 |
Release history
Parents
Children
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 4WOI|1|CA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2897 |
2 | 4V9D|1|DA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2896 |
3 | 6I7V|1|CA | Ribosomal protein paralogs bL31 and bL36 | X-RAY DIFFRACTION | 2.9 | 2898 |
4 | 4U24|1|DA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2897 |
5 | 4U26|1|DA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2897 |
6 | 4U20|1|DA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2897 |
7 | 4U1U|1|DA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2897 |
8 | 4U1V|1|DA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2897 |
9 | 4U27|1|DA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2897 |
10 | 4U25|1|DA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2897 |
11 | 4YBB|1|CA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2876 |
12 | 5J91|1|CA | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 2876 |
13 | 5J5B|1|CA | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 2876 |
14 | 5J7L|1|CA | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 2875 |
15 | 6U48|1|CA | E. coli 50S with phazolicin (PHZ) bound in exit tunnel | ELECTRON MICROSCOPY | 2.87 | 2875 |
16 | 7LVK|1|I | Cfr-modified 50S subunit from Escherichia coli | ELECTRON MICROSCOPY | 2.2 | 2876 |
17 | 6PJ6|1|I | High resolution cryo-EM structure of E.coli 50S | ELECTRON MICROSCOPY | 2.2 | 2874 |
18 | 6PC7|1|I | E. coli 50S ribosome bound to compound 46 | ELECTRON MICROSCOPY | 2.5 | 2876 |
19 | 6PCR|1|I | E. coli 50S ribosome bound to compound 40o | ELECTRON MICROSCOPY | 2.5 | 2876 |
20 | 6PC5|1|I | E. coli 50S ribosome bound to compounds 46 and VS1 | ELECTRON MICROSCOPY | 2.7 | 2876 |
21 | 6PC6|1|I | E. coli 50S ribosome bound to compound 47 | ELECTRON MICROSCOPY | 2.5 | 2876 |
22 | 6PCS|1|I | E. coli 50S ribosome bound to compound 40e | ELECTRON MICROSCOPY | 2.8 | 2876 |
23 | 6PCQ|1|I | E. coli 50S ribosome bound to VM2 | ELECTRON MICROSCOPY | 2.6 | 2876 |
24 | 6PCT|1|I | E. coli 50S ribosome bound to compound 41q | ELECTRON MICROSCOPY | 2.8 | 2876 |
25 | 6PC8|1|I | E. coli 50S ribosome bound to compound 40q | ELECTRON MICROSCOPY | 2.9 | 2876 |
26 | 6PCH|1|I | E. coli 50S ribosome bound to compound 21 | ELECTRON MICROSCOPY | 2.9 | 2876 |
27 | 6WYV|1|I | E. coli 50S ribosome bound to compounds 47 and VS1 | ELECTRON MICROSCOPY | 2.75 | 2876 |
28 | 6I7V|1|DA | Ribosomal protein paralogs bL31 and bL36 | X-RAY DIFFRACTION | 2.9 | 2875 |
29 | 5J7L|1|DA | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 2886 |
30 | 5J91|1|DA | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 2886 |
31 | 5J5B|1|DA | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 2886 |
32 | 4YBB|1|DA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 2883 |
33 | 6XZA|1|A2 | E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification). | ELECTRON MICROSCOPY | 2.66 | 2878 |
34 | 6XZB|1|A2 | E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification). | ELECTRON MICROSCOPY | 2.54 | 2878 |
35 | 6XZ7|1|A | E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet). | ELECTRON MICROSCOPY | 2.1 | 2876 |
36 | 7K00|1|a | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2729 |
37 | 6ZTP|1|BA | E. coli 70S-RNAP expressome complex in uncoupled state 6 | ELECTRON MICROSCOPY | 3 | 2876 |
38 | 6ZTO|1|BA | E. coli 70S-RNAP expressome complex in uncoupled state 1 | ELECTRON MICROSCOPY | 3 | 2876 |
39 | 6ZU1|1|BA | E. coli 70S-RNAP expressome complex in uncoupled state 2 | ELECTRON MICROSCOPY | 3 | 2876 |
40 | 7P3K|1|a | Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control) | ELECTRON MICROSCOPY | 2.9 | 2730 |
41 | 7OIZ|1|a | Cryo-EM structure of 70S ribosome stalled with TnaC peptide | ELECTRON MICROSCOPY | 2.9 | 2730 |
42 | 5NWY|1|N | 2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex | ELECTRON MICROSCOPY | 2.9 | 2898 |
43 | 5MDV|1|1 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | ELECTRON MICROSCOPY | 2.97 | 2881 |
44 | 6ORE|1|1 | Release complex 70S | ELECTRON MICROSCOPY | 2.9 | 2881 |
45 | 7NWT|1|1 | Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV) | ELECTRON MICROSCOPY | 2.66 | 2881 |
46 | 7NSO|1|A | Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA | ELECTRON MICROSCOPY | 2.9 | 2903 |
47 | 5WDT|1|A | 70S ribosome-EF-Tu H84A complex with GppNHp | ELECTRON MICROSCOPY | 3 | 2876 |
48 | 5WFS|1|A | 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) | ELECTRON MICROSCOPY | 3 | 2876 |
49 | 5AFI|1|A | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 2876 |
50 | 6Y69|1|A | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinX | ELECTRON MICROSCOPY | 2.86 | 2887 |
51 | 6H4N|1|A | Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome | ELECTRON MICROSCOPY | 3 | 2900 |
52 | 6WDE|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B) | ELECTRON MICROSCOPY | 3 | 2903 |
53 | 6WD0|1|1 | Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A) | ELECTRON MICROSCOPY | 3 | 2903 |
54 | 7ST2|1|1 | Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII) | ELECTRON MICROSCOPY | 2.9 | 2903 |
55 | 7ST6|1|1 | Pre translocation, non-rotated 70S ribosome (Structure I) | ELECTRON MICROSCOPY | 3 | 2903 |
56 | 7N31|1|23 | Elongating 70S ribosome complex in a post-translocation (POST) conformation | ELECTRON MICROSCOPY | 2.69 | 2882 |
57 | 6TBV|1|23S1 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2) | ELECTRON MICROSCOPY | 2.7 | 2874 |
58 | 6TC3|1|23S1 | Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1) | ELECTRON MICROSCOPY | 2.7 | 2874 |
59 | 7B5K|1|A | E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain. | ELECTRON MICROSCOPY | 2.9 | 2874 |
60 | 7O19|1|BA | Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.9 | 2874 |
61 | 7O1A|1|BA | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.4 | 2874 |
62 | 7O1C|1|BA | Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan | ELECTRON MICROSCOPY | 2.6 | 2874 |
63 | 7OIF|1|1 | CspA-27 cotranslational folding intermediate 2 | ELECTRON MICROSCOPY | 3 | 2881 |
64 | 7OII|1|1 | CspA-70 cotranslational folding intermediate 2 | ELECTRON MICROSCOPY | 3 | 2881 |
65 | 7OT5|1|1 | CspA-70 cotranslational folding intermediate 1 | ELECTRON MICROSCOPY | 2.9 | 2881 |
66 | 6YS3|1|b | Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptide | ELECTRON MICROSCOPY | 2.58 | 2888 |
67 | 6QDW|1|b | Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide | ELECTRON MICROSCOPY | 2.83 | 2888 |
68 | 7S1K|1|I | Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid | ELECTRON MICROSCOPY | 2.42 | 2875 |
69 | 7S1H|1|I | Wild-type Escherichia coli ribosome with antibiotic linezolid | ELECTRON MICROSCOPY | 2.35 | 2876 |
70 | 7S1G|1|I | wild-type Escherichia coli stalled ribosome with antibiotic linezolid | ELECTRON MICROSCOPY | 2.48 | 2874 |
71 | 7S1I|1|I | Wild-type Escherichia coli stalled ribosome with antibiotic radezolid | ELECTRON MICROSCOPY | 2.48 | 2874 |
72 | 7S1J|1|I | Wild-type Escherichia coli ribosome with antibiotic radezolid | ELECTRON MICROSCOPY | 2.47 | 2876 |
73 | 7N1P|1|23 | Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation | ELECTRON MICROSCOPY | 2.33 | 2882 |
74 | 7TOS|1|23S | E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20 | ELECTRON MICROSCOPY | 2.9 | 2903 |
75 | 7BL4|1|A | in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle | ELECTRON MICROSCOPY | 2.4 | 2897 |
76 | 4V9P|1|GA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
77 | 4V9O|1|GA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
78 | 4V9O|1|EA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
79 | 4V9P|1|EA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
80 | 4V9P|1|AA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
81 | 4V9O|1|AA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
82 | 4V9O|1|CA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
83 | 4V9P|1|CA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 2854 |
84 | 7PJS|1|A | Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C) | ELECTRON MICROSCOPY | 2.35 | 2880 |
85 | 6YSS|1|A | Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis state | ELECTRON MICROSCOPY | 2.6 | 2880 |
86 | 5IQR|1|1 | Structure of RelA bound to the 70S ribosome | ELECTRON MICROSCOPY | 3 | 2882 |
87 | 4WOI|1|BA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 2897 |
88 | 4U26|1|BA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 2897 |
89 | 4U24|1|BA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 2897 |
90 | 4U25|1|BA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 2897 |
91 | 4U27|1|BA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 2897 |
92 | 4U1V|1|BA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 2897 |
93 | 4U20|1|BA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 2897 |
94 | 4U1U|1|BA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 2897 |
95 | 4V9D|1|CA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 2897 |
96 | 7N30|1|23 | Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation | ELECTRON MICROSCOPY | 2.66 | 2879 |
97 | 7N2U|1|23 | Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation | ELECTRON MICROSCOPY | 2.53 | 2880 |
98 | 7N2V|1|23 | Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1) | ELECTRON MICROSCOPY | 2.54 | 2881 |
99 | 7N2C|1|23 | Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2) | ELECTRON MICROSCOPY | 2.72 | 2879 |
100 | 7OTC|1|A | Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B | ELECTRON MICROSCOPY | 2.9 | 2879 |
101 | 7UG7|1|23 | 70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B | ELECTRON MICROSCOPY | 2.58 | 2879 |
102 | 6QUL|1|A | Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid | ELECTRON MICROSCOPY | 3 | 2799 |
103 | 7ODE|1|I | E. coli 50S ribosome LiCl core particle | ELECTRON MICROSCOPY | 2.84 | 1986 |
104 | 6HRM|1|1 | E. coli 70S d2d8 stapled ribosome | ELECTRON MICROSCOPY | 2.96 | 4417 |