Equivalence class NR_3.0_88987.8 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5DM6|1|X (rep) | Large subunit ribosomal RNA | 23S ribosomal RNA | Deinococcus radiodurans | Bacteria | RF02541 | Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans | X-ray diffraction | 2.9 | 2015-11-11 |
| 2 | 5DM7|1|X | Large subunit ribosomal RNA | 23S ribosomal RNA | Deinococcus radiodurans | Bacteria | RF02541 | Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin A | X-ray diffraction | 3 | 2015-11-11 |
| 3 | 2ZJR|1|X | Large subunit ribosomal RNA | ribosomal 23S RNA | Deinococcus radiodurans | Bacteria | RF02541 | Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans | X-ray diffraction | 2.91 | 2008-06-17 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.0_88987.8 | NR_3.0_88987.7 | 3.192 | (3) 2ZJR|1|X, 5DM6|1|X, 5DM7|1|X | (0) | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.0_88987.8 | NR_3.0_88987.9 | 3.199 | (3) 2ZJR|1|X, 5DM6|1|X, 5DM7|1|X | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5DM7|1|X | Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with hygromycin A | X-RAY DIFFRACTION | 3 | 2780 |
| 2 | 5DM6|1|X | Crystal structure of the 50S ribosomal subunit from Deinococcus radiodurans | X-RAY DIFFRACTION | 2.9 | 2780 |
| 3 | 2ZJR|1|X | Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans | X-RAY DIFFRACTION | 2.91 | 2686 |