Equivalence class NR_3.0_96269.11 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6ZP4|1|1 (rep) | Transfer RNA | tRNA | Homo sapiens | Eukarya | RF00005 | SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2 | Electron microscopy | 2.9 | 2020-07-29 |
| 2 | 6QZP|1|S6 | Transfer RNA | E site tRNA (75-MER) | Homo sapiens | Eukarya | RF00005 | High-resolution cryo-EM structure of the human 80S ribosome | Electron microscopy | 2.9 | 2019-04-24 |
| 3 | 7QVP|1|B5 | Transfer RNA | tRNA P/E, mRNA | Homo sapiens | Eukarya | RF00005 | Human collided disome (di-ribosome) stalled on XBP1 mRNA | Electron microscopy | 3 | 2022-10-12 |
Release history
| Release | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.0_96269.11 | NR_3.0_96269.10 | 3.252 | (2) 6ZP4|1|1, 6QZP|1|S6 | (1) 7QVP|1|B5 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.0_96269.11 | NR_3.0_96269.12 | 3.274 | (3) 6QZP|1|S6, 6ZP4|1|1, 7QVP|1|B5 | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6QZP|1|S6 | High-resolution cryo-EM structure of the human 80S ribosome | ELECTRON MICROSCOPY | 2.9 | 75 |
| 2 | 7QVP|1|B5 | Human collided disome (di-ribosome) stalled on XBP1 mRNA | ELECTRON MICROSCOPY | 3 | 75 |
| 3 | 6ZP4|1|1 | SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2 | ELECTRON MICROSCOPY | 2.9 | 75 |