RNA 3D Hub //

Equivalence class NR_3.0_96683.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15GMF|1|E (rep)RNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-ray diffraction2.52016-11-02
25GMF|1|HRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-ray diffraction2.52016-11-02
35GMF|1|FRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-ray diffraction2.52016-11-02
45GMF|1|GRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with guanosine and polyUX-ray diffraction2.52016-11-02
55GMG|1|DRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-ray diffraction2.62016-11-02
65GMG|1|CRNA (5'-R(P*UP*UP*UP*U)-3')Homo sapiensCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-ray diffraction2.62016-11-02
73IE1|1|ERNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852009-08-04
83IE1|1|HRNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852009-08-04
93IE1|1|FRNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852009-08-04
103IE1|1|GRNA (5'-R(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852009-08-04
112ZDE|1|ERNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852008-11-25
122ZDE|1|FRNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852008-11-25
132ZDE|1|HRNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852008-11-25
142ZDE|1|GRNA (5'-D(P*UP*UP*UP*U)-3')Crystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-ray diffraction2.852008-11-25
151NB7|1|E5'-R(*UP*UP*UP*U)-3'HC-J4 RNA polymerase complexed with short RNA template strandX-ray diffraction2.92003-03-25
161NB7|1|F5'-R(*UP*UP*UP*U)-3'HC-J4 RNA polymerase complexed with short RNA template strandX-ray diffraction2.92003-03-25

Release history

Release3.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.45
Date2017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_96683.2NR_3.0_96683.13.0(12) 3IE1|1|F, 5GMG|1|D, 3IE1|1|E, 5GMG|1|C, 1NB7|1|F, 5GMF|1|H, 1NB7|1|E, 5GMF|1|G, 5GMF|1|F, 5GMF|1|E, 3IE1|1|H, 3IE1|1|G(4) 2ZDE|1|G, 2ZDE|1|F, 2ZDE|1|E, 2ZDE|1|H(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_96683.2NR_3.0_96683.33.46(16) 5GMF|1|F, 5GMF|1|E, 3IE1|1|H, 3IE1|1|G, 3IE1|1|F, 3IE1|1|E, 2ZDE|1|H, 2ZDE|1|G, 2ZDE|1|F, 2ZDE|1|E, 1NB7|1|F, 1NB7|1|E, 5GMG|1|D, 5GMG|1|C, 5GMF|1|H, 5GMF|1|G(0) (1) 5Z4J|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12ZDE|1|GCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852
25GMG|1|DCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.64
35GMF|1|HCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
45GMF|1|FCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
55GMF|1|ECrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
65GMF|1|GCrystal structure of monkey TLR7 in complex with guanosine and polyUX-RAY DIFFRACTION2.54
75GMG|1|CCrystal structure of monkey TLR7 in complex with loxoribine and polyUX-RAY DIFFRACTION2.64
83IE1|1|HCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
92ZDE|1|HCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
102ZDE|1|ECrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
113IE1|1|ECrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
122ZDE|1|FCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
133IE1|1|FCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.854
143IE1|1|GCrystal structure of H380A mutant TTHA0252 from Thermus thermophilus HB8 complexed with RNAX-RAY DIFFRACTION2.852
151NB7|1|FHC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.94
161NB7|1|EHC-J4 RNA polymerase complexed with short RNA template strandX-RAY DIFFRACTION2.94
Copyright 2024 BGSU RNA group. Page generated in 0.2201 s