RNA 3D Hub //

Equivalence class NR_3.0_97519.14 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15FDU|1|1A (rep)Large subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92016-01-27
25FDV|1|1ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-01-27
34Y4O|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
44Z8C|1|1ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
54V8I|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
64Y4P|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
74V9R|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
85F8K|1|1ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
91VY4|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
104W2H|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
114WPO|1|AALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
124W2F|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
135DOY|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
144Z3S|1|1ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
154W2G|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
164W2I|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
175FDV|1|2ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-01-27
184V8I|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
194Y4O|1|2ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
204V9R|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
211VY5|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
225FDU|1|2ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92016-01-27
234Z8C|1|2ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
245F8K|1|2ALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
251VY4|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
261VY7|1|BALarge subunit ribosomal RNA23S Ribosomal RNA, Cytidine-PuromycinThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
274W2H|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
284V8G|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
294WQY|1|AALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
304W2F|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
314V8G|1|BALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
324Z3S|1|2ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
334W2I|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
344WQF|1|AALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
354WQU|1|AALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
361VY6|1|BALarge subunit ribosomal RNA23S Ribosomal RNA, Cytidine-PuromycinThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
374WPO|1|CALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
384W2G|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
391VY5|1|DALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
404Y4P|1|2ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
414V9H|1|BALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-ray diffraction2.862014-07-09
421VY7|1|DALarge subunit ribosomal RNA23S Ribosomal RNA, Cytidine-PuromycinThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
434LNT|1|YALarge subunit ribosomal RNA23S rRNA, tRNA acceptor end mimicThermus thermophilusBacteriaRF02541Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
445DOY|1|2ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
454WQU|1|CALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
464W2E|1|ALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92014-10-01
474V8B|1|BALarge subunit ribosomal RNARNA (2912-MER)Thermus thermophilusBacteriaRF02541Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
484WQY|1|CALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
491VY6|1|DALarge subunit ribosomal RNA23S Ribosomal RNA, Cytidine-PuromycinThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
504WQF|1|CALarge subunit ribosomal RNA23S Ribosomal RNAThermus thermophilusBacteriaRF02541Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
514V67|1|DALarge subunit ribosomal RNA23S RRNAThermus thermophilusBacteriaRF02541Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
524V8B|1|DALarge subunit ribosomal RNARNA (2912-MER)Thermus thermophilusBacteriaRF02541Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
534LNT|1|RALarge subunit ribosomal RNA23S rRNA, tRNA acceptor end mimicThermus thermophilusBacteriaRF02541Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
544V67|1|BALarge subunit ribosomal RNA23S RRNAThermus thermophilusBacteriaRF02541Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
554V8D|1|BALarge subunit ribosomal RNARNA (2912-MER)Thermus thermophilusBacteriaRF02541Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
564V7Y|1|BALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
574V7X|1|BALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
584V7Y|1|DALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
594V7X|1|DALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
604V7W|1|BALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
614V7W|1|DALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
624V90|1|BALarge subunit ribosomal RNA23S RIBOSOMAL RNAThermus thermophilusBacteriaRF02541Thermus thermophilus RibosomeX-ray diffraction2.952014-07-09
635E81|1|1HLarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-ray diffraction2.952016-01-27
644V8D|1|DALarge subunit ribosomal RNARNA (2912-MER)Thermus thermophilusBacteriaRF02541Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
655E81|1|14Large subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-ray diffraction2.952016-01-27
664V51|1|BALarge subunit ribosomal RNA23S RIBOSOMAL RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
674V51|1|DALarge subunit ribosomal RNA23S RIBOSOMAL RNAThermus thermophilusBacteriaRF02541Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
684WSD|1|1HLarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
694WSD|1|14Large subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
704V7L|1|BALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
714V7L|1|DALarge subunit ribosomal RNA23S ribosomal RNAThermus thermophilusBacteriaRF02541The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09

Release history

Release2.612.622.632.642.652.662.672.682.69
Date2016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-01

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_97519.14NR_all_97519.132.61(69) 1VY5|1|DA, 1VY6|1|BA, 1VY5|1|BA, 1VY6|1|DA, 1VY4|1|BA, 1VY4|1|DA, 5FDV|1|2A, 5FDV|1|1A, 5FDU|1|1A, 5E81|1|1H, 5FDU|1|2A, 5DOY|1|2A, 5E81|1|14, 5DOY|1|1A, 4Z8C|1|1A, 4Z8C|1|2A, 4Z3S|1|2A, 4Y4P|1|2A, 4Z3S|1|1A, 4Y4O|1|2A, 4Y4O|1|1A, 4Y4P|1|1A, 4WSD|1|14, 4WQY|1|CA, 4WSD|1|1H, 4WQU|1|CA, 4WQY|1|AA, 4WQU|1|AA, 4WQF|1|AA, 4WQF|1|CA, 4WPO|1|CA, 4W2I|1|DA, 4WPO|1|AA, 4W2H|1|DA, 4W2H|1|BA, 4W2I|1|BA, 4W2G|1|BA, 4W2F|1|DA, 4W2G|1|DA, 4W2E|1|A, 4W2F|1|BA, 4V9R|1|DA, 4V9H|1|BA, 4V9R|1|BA, 4V90|1|BA, 4V8I|1|BA, 4V8I|1|DA, 4V8G|1|BA, 4V8D|1|DA, 4V8G|1|DA, 4V8B|1|DA, 4V8B|1|BA, 4V8D|1|BA, 4V7Y|1|BA, 4V7Y|1|DA, 4V7X|1|DA, 4V7W|1|DA, 4V7X|1|BA, 4V7W|1|BA, 4V7L|1|BA, 4V7L|1|DA, 4V67|1|BA, 4V51|1|DA, 4V67|1|DA, 4LNT|1|YA, 4LNT|1|RA, 4V51|1|BA, 1VY7|1|BA, 1VY7|1|DA(2) 5F8K|1|2A, 5F8K|1|1A(184) 4V6A|1|BA, 4V83|1|DA, 4V84|1|BA, 4V84|1|DA, 4V87|1|AA, 4V87|1|DA, 4V8A|1|AA, 4V8A|1|BA, 4V8C|1|AA, 4V8C|1|BA, 4V8E|1|AA, 4V8E|1|CA, 4V8F|1|AA, 4V8F|1|DA, 4V8H|1|BA, 4V83|1|BA, 4V7Z|1|DA, 4V6A|1|DA, 4V6F|1|AA, 4V6F|1|DA, 4V6G|1|BA, 4V6G|1|DA, 4V7J|1|AA, 4V7J|1|BA, 4V7K|1|AA, 4V7K|1|BA, 4V7M|1|BA, 4V7M|1|DA, 4V7P|1|BA, 4V7P|1|CA, 4V7Z|1|BA, 4V8H|1|DA, 4V8J|1|BA, 4V9B|1|DA, 4V9I|1|BA, 4V9I|1|DA, 4V9J|1|BA, 4V9J|1|DA, 4V9K|1|BA, 4V9K|1|DA, 4V9L|1|BA, 4V9L|1|DA, 4V9M|1|BA, 4V9M|1|DA, 4V9N|1|BA, 4V9N|1|DA, 4V9Q|1|AA, 4V9B|1|BA, 4V9A|1|DA, 4V8J|1|DA, 4V8N|1|BA, 4V8N|1|DA, 4V8O|1|BA, 4V8Q|1|AA, 4V8U|1|BA, 4V8U|1|DA, 4V8X|1|BA, 4V8X|1|DA, 4V95|1|BA, 4V95|1|DA, 4V97|1|BA, 4V97|1|DA, 4V9A|1|BA, 4V9Q|1|CA, 4V68|1|BA, 4L47|1|YA, 4TUB|1|RA, 4TUB|1|YA, 4TUC|1|RA, 4TUC|1|YA, 4TUD|1|RA, 4TUD|1|YA, 4TUE|1|RA, 4TUE|1|YA, 4V42|1|BA, 4V4I|1|w, 4V4J|1|w, 4V4P|1|AA, 4V4R|1|BA, 4V4S|1|BA, 4TUA|1|YA, 4TUA|1|RA, 4L71|1|RA, 4L71|1|YA, 4LEL|1|RA, 4LEL|1|YA, 4LFZ|1|RA, 4LFZ|1|YA, 4LSK|1|RA, 4LSK|1|YA, 4LT8|1|RA, 4LT8|1|YA, 4P6F|1|RA, 4P6

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V90|1|BAThermus thermophilus RibosomeX-RAY DIFFRACTION2.952901
24V9H|1|BACrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.862859
34V7W|1|DAStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION32725
44V7W|1|BAStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION32725
54V7X|1|DAStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION32725
64V7X|1|BAStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION32725
74V7Y|1|BAStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION32725
84V7Y|1|DAStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION32725
94V51|1|BAStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82772
104V51|1|DAStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82772
114V7L|1|DAThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32800
124V7L|1|BAThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32800
134V67|1|BACrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32879
144V67|1|DACrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32879
154W2E|1|ACrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92873
164V9R|1|DACrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32714
174WQF|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82848
184WQY|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82848
194WQU|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82868
204Z8C|1|2ACrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92790
214Z3S|1|2ACrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652789
224Y4P|1|2ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52789
234W2F|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42800
244W2G|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552800
251VY5|1|DACrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552800
261VY4|1|DACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62800
274WPO|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82868
281VY6|1|DACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92800
294W2H|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72800
305DOY|1|2ACrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.62789
314W2I|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72800
321VY7|1|DACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82800
331VY7|1|BACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82819
344W2I|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72822
355DOY|1|1ACrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.62860
364Z3S|1|1ACrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652860
374Y4P|1|1ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52860
384W2F|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42871
394W2G|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552819
401VY5|1|BACrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552819
411VY4|1|BACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62819
424WPO|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82872
434WQU|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82872
441VY6|1|BACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92819
454W2H|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72822
464V9R|1|BACrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32731
474WQF|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82852
484WQY|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82852
494Z8C|1|1ACrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92746
505F8K|1|1ACrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82861
515FDV|1|1ACrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82861
525FDU|1|1ACrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92861
534Y4O|1|1ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32861
544V8G|1|DACrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION32814
554V8G|1|BACrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION32809
564V8I|1|BACrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.72827
574V8I|1|DACrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.72798
584Y4O|1|2ACrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32856
595FDV|1|2ACrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82857
605FDU|1|2ACrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92857
615F8K|1|2ACrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82856
624V8D|1|DAStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32907
634V8B|1|DACrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32907
644WSD|1|14Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952909
655E81|1|14Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952855
664LNT|1|YACrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942883
674V8B|1|BACrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32912
684V8D|1|BAStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32912
694WSD|1|1HComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952912
705E81|1|1HStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952888
714LNT|1|RACrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942882
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