#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14V88|1|A6 (rep)Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
25TBW|1|sRSmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
34V88|1|A2Small subunit ribosomal RNA18S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF01960The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
45TBW|1|ASmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
57OSA|1|18SSmall subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
66HHQ|1|sRSmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
75OBM|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
85I4L|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
95MEI|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
105LYB|1|6Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
115I4L|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
125OBM|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
137OSM|1|18SSmall subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
145MEI|1|ASmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
155ON6|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
166HHQ|1|ASmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
175LYB|1|2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
185NDV|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
195NDV|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
205ON6|1|ASmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
215TGM|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
225TGM|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
235DAT|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
245TGA|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
255DGE|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
265DGV|1|6Small subunit ribosomal RNASaccharomyces cerevisiae S288c RDN37-1 miscRNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
275DGF|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
285DC3|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
295DAT|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
305TGA|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
315DGV|1|2Small subunit ribosomal RNASaccharomyces cerevisiae S288c RDN37-1 miscRNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
325DGE|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
335DGF|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
345DC3|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
357ZW0|1|2Small subunit ribosomal RNA18S ribosomal RNA (RDN18-1)Saccharomyces cerevisiae W303EukaryaRF01960FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
367PZY|1|ASmall subunit ribosomal RNA18S ribosomal RNACandida albicans SC5314EukaryaRF01960Structure of the vacant Candida albicans 80S ribosomeElectron microscopy2.322022-05-18
377ZUX|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Collided ribosome in a disome unit from S. cerevisiaeElectron microscopy2.52023-02-22
387Q08|1|ASmall subunit ribosomal RNA18S ribosomal RNACandida albicans SC5314EukaryaRF01960Structure of Candida albicans 80S ribosome in complex with cycloheximideElectron microscopy2.562022-05-25
396T4Q|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.Electron microscopy2.62019-12-25
407MPJ|1|B5Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Stm1 bound vacant 80S structure isolated from nop1-D243AElectron microscopy2.72022-05-11
417Q0F|1|ASmall subunit ribosomal RNA18S ribosomal RNACandida albicans SC5314EukaryaRF01960Structure of Candida albicans 80S ribosome in complex with phyllanthosideElectron microscopy2.642022-05-18
427Q0R|1|ASmall subunit ribosomal RNA18S ribosomal RNACandida albicans SC5314EukaryaRF01960Structure of the Candida albicans 80S ribosome in complex with blasticidin sElectron microscopy2.672022-05-25
437Q0P|1|ASmall subunit ribosomal RNA18S ribosomal RNACandida albicans SC5314EukaryaRF01960Structure of the Candida albicans 80S ribosome in complex with anisomycinElectron microscopy2.772022-05-18
446WOO|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPElectron microscopy2.92020-09-23
454U4R|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
466TB3|1|2Small subunit ribosomal RNASaccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNASaccharomyces cerevisiaeEukaryaRF01960yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexElectron microscopy2.82020-04-22
476SNT|1|2Small subunit ribosomal RNASaccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNASaccharomyces cerevisiaeEukaryaRF01960Yeast 80S ribosome stalled on SDD1 mRNA.Electron microscopy2.82020-03-04
484U4R|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
494U3U|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
507A1G|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complexElectron microscopy32020-10-14
516ZVI|1|hSmall subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Mbf1-ribosome complexElectron microscopy32020-09-09
524U3U|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
537N8B|1|B5Small subunit ribosomal RNA18S RIBOSOMAL RNASaccharomyces cerevisiaeEukaryaRF01960Cycloheximide bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
547MPI|1|B5Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Stm1 bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
558C01|1|2Small subunit ribosomal RNA18S rRNA precursorSaccharomyces cerevisiaeEukaryaRF01960Enp1TAP_A population of yeast small ribosomal subunit precursorsElectron microscopy2.72022-12-28
564U3M|1|6Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
574U4Q|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
584U4U|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
594U52|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
604U3M|1|2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
617RR5|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Structure of ribosomal complex bound with Rbg1/Tma46Electron microscopy3.232021-11-10
624U52|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
634U4U|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
644U6F|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
654U4Q|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
664U4N|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
676Q8Y|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexElectron microscopy3.12019-03-13
684U6F|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
694U4Z|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
706XIR|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressElectron microscopy3.22020-08-26
717B7D|1|2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiae S288CEukaryaRF01960Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsElectron microscopy3.32021-03-10
726SV4|1|2bSmall subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
736SV4|1|2cSmall subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
744U4Y|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
754U3N|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
764U4Z|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
776T7T|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Structure of yeast 80S ribosome stalled on poly(A) tract.Electron microscopy3.12019-12-25
784U55|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
795M1J|1|22Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Nonstop ribosomal complex bound with Dom34 and Hbs1Electron microscopy3.32017-01-18
804U4N|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
816T7I|1|C2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.Electron microscopy3.22019-12-25
824U50|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
834U51|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
844U3N|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
856S47|1|BASmall subunit ribosomal RNA18S rRNA (1707-MER)Saccharomyces cerevisiaeEukaryaRF01960Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1Electron microscopy3.282019-07-24
864U4Y|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
874U51|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
887ZPQ|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)Electron microscopy3.472023-02-22
898C00|1|2Small subunit ribosomal RNA18S rRNA precursorSaccharomyces cerevisiaeEukaryaRF01960Enp1TAP-S21_A population of yeast small ribosomal subunit precursors depleted of rpS21/eS21Electron microscopy2.92022-12-28
904U55|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
916TNU|1|2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.Electron microscopy3.12020-04-22
926Z6K|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesElectron microscopy3.42020-07-29
936Z6J|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionElectron microscopy3.42020-07-29
946FAI|1|2Small subunit ribosomal RNA20S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunitElectron microscopy3.42018-02-28
954U50|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
965JUP|1|ASmall subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)Electron microscopy3.52016-10-05
974U53|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
986RBD|1|2Small subunit ribosomal RNA20S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particlesElectron microscopy3.472019-06-26
994U53|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1006SV4|1|2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1014U56|1|6Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1026LQP|1|SA+ 6LQP|1|5A+ 6LQP|1|3ASmall subunit ribosomal RNA + U3 small nucleolar RNA18S pre-rRNA, 5' ETS, U3 snoRNASaccharomyces cerevisiaeEukaryaRF01960 + RF01846Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)Electron microscopy3.22020-09-16
1034U56|1|2Small subunit ribosomal RNA18S ribosomal RNASaccharomyces cerevisiaeEukaryaRF01960Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1046KE6|1|SA+ 6KE6|1|5A+ 6KE6|1|3ASmall subunit ribosomal RNA + U3 small nucleolar RNA18S rRNA, 5' ETS, U3 snoRNASaccharomyces cerevisiaeEukaryaRF01960 + RF018463.4 angstrom cryo-EM structure of yeast 90S small subunit preribosomeElectron microscopy3.42020-08-05
1057WTR|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3Electron microscopy3.52022-10-19
1066ZQG|1|D3Small subunit ribosomal RNA18S rRNA, U3 snoRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-CElectron microscopy3.52020-09-23
1077WTN|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (with Rps2)Electron microscopy3.42022-10-19
1087WTL|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-DElectron microscopy3.32022-10-19
1097WTO|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (without Rps2)Electron microscopy3.52022-10-19
1107WTM|1|C2Small subunit ribosomal RNA18S rRNASaccharomyces cerevisiaeEukaryaRF01960Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-EElectron microscopy3.52022-10-19

Release history

Release3.2753.2763.2773.2783.2793.2803.2813.2823.283
Date2023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-17

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well.

#SPDBTitleMethodResolutionLength
1
6XIR|1|2
Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressELECTRON MICROSCOPY3.21708
2
5DGE|1|6
Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.451796
3
5DC3|1|6
Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.251796
4
5DAT|1|6
Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.151796
5
5DGF|1|6
Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.31796
6
5TGM|1|6
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.51796
7
4U56|1|6
Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.451795
8
4U52|1|6
Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION31795
9
5ON6|1|6
Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.11783
10
5MEI|1|6
Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.51783
11
6HHQ|1|sR
Crystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11783
12
5TBW|1|sR
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION31783
13
5DGV|1|6
Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.11796
14
5TGA|1|6
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.31796
15
5LYB|1|6
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.251796
16
4V88|1|A6
The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION31770
17
4U6F|1|6
Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11795
18
4U3N|1|6
Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21795
19
4U4R|1|6
Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.81795
20
4U3U|1|6
Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.91795
21
4U3M|1|6
Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION31795
22
4U4Y|1|6
Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21795
23
5I4L|1|6
Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11795
24
4U4N|1|6
Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11795
25
4U4U|1|6
Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION31795
26
4U4Q|1|6
Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION31795
27
4U4Z|1|6
Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11795
28
4U55|1|6
Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21795
29
4U51|1|6
Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21795
30
4U50|1|6
Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21795
31
4U53|1|6
Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.31795
32
5OBM|1|6
Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.41739
33
5NDV|1|6
Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.31683
34
5OBM|1|2
Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.41712
35
5DGE|1|2
Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.451782
36
5DC3|1|2
Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.251782
37
5DGV|1|2
Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.11782
38
5TBW|1|A
Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION31781
39
6HHQ|1|A
Crystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11781
40
5ON6|1|A
Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.11781
41
5MEI|1|A
Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.51781
42
5TGA|1|2
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.31782
43
5LYB|1|2
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.251782
44
4V88|1|A2
The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION31768
45
5I4L|1|2
Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11781
46
4U4N|1|2
Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11750
47
4U4U|1|2
Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION31750
48
4U4Q|1|2
Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION31750
49
4U3N|1|2
Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21750
50
4U6F|1|2
Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11781
51
4U3U|1|2
Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.91750
52
4U4R|1|2
Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.81750
53
4U3M|1|2
Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION31750
54
4U4Y|1|2
Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21750
55
4U4Z|1|2
Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.11750
56
4U50|1|2
Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21750
57
4U53|1|2
Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.31750
58
4U51|1|2
Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21750
59
4U55|1|2
Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.21750
60
4U52|1|2
Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION31750
61
4U56|1|2
Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.451750
62
5TGM|1|2
Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.51782
63
5DGF|1|2
Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.31782
64
5DAT|1|2
Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.151782
65
5NDV|1|2
Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.31712
66
5JUP|1|A
Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)ELECTRON MICROSCOPY3.51781
67
7MPI|1|B5
Stm1 bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.051757
68
7MPJ|1|B5
Stm1 bound vacant 80S structure isolated from nop1-D243AELECTRON MICROSCOPY2.71744
69
7N8B|1|B5
Cycloheximide bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.051759
70
7A1G|1|2
Structure of a crosslinked yeast ABCE1-bound 43S pre-initiation complexELECTRON MICROSCOPY31771
71
7PZY|1|A
Structure of the vacant Candida albicans 80S ribosomeELECTRON MICROSCOPY2.321692
72
7Q0P|1|A
Structure of the Candida albicans 80S ribosome in complex with anisomycinELECTRON MICROSCOPY2.771692
73
7Q0R|1|A
Structure of the Candida albicans 80S ribosome in complex with blasticidin sELECTRON MICROSCOPY2.671692
74
7Q0F|1|A
Structure of Candida albicans 80S ribosome in complex with phyllanthosideELECTRON MICROSCOPY2.641692
75
7Q08|1|A
Structure of Candida albicans 80S ribosome in complex with cycloheximideELECTRON MICROSCOPY2.561692
76
7OSM|1|18S
Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION31732
77
7OSA|1|18S
Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION31717
78
5M1J|1|22
Nonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.31781
79
6S47|1|BA
Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1ELECTRON MICROSCOPY3.281707
80
6SV4|1|2
The cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.31758
81
6WOO|1|2
CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPELECTRON MICROSCOPY2.91780
82
7ZPQ|1|2
Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)ELECTRON MICROSCOPY3.471771
83
6TB3|1|2
yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexELECTRON MICROSCOPY2.81771
84
6SNT|1|2
Yeast 80S ribosome stalled on SDD1 mRNA.ELECTRON MICROSCOPY2.81771
85
6T4Q|1|C2
Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.ELECTRON MICROSCOPY2.61771
86
6T7I|1|C2
Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.ELECTRON MICROSCOPY3.21771
87
6T7T|1|C2
Structure of yeast 80S ribosome stalled on poly(A) tract.ELECTRON MICROSCOPY3.11771
88
7B7D|1|2
Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsELECTRON MICROSCOPY3.31771
89
6TNU|1|2
Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.ELECTRON MICROSCOPY3.11771
90
7RR5|1|C2
Structure of ribosomal complex bound with Rbg1/Tma46ELECTRON MICROSCOPY3.231771
91
7ZW0|1|2
FAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.41765
92
6Q8Y|1|2
Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexELECTRON MICROSCOPY3.11767
93
6Z6K|1|C2
Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesELECTRON MICROSCOPY3.41700
94
6Z6J|1|C2
Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionELECTRON MICROSCOPY3.41700
95
7ZUX|1|2
Collided ribosome in a disome unit from S. cerevisiaeELECTRON MICROSCOPY2.51769
96
6SV4|1|2b
The cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.31758
97
6SV4|1|2c
The cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.31758
98
6ZVI|1|h
Mbf1-ribosome complexELECTRON MICROSCOPY31758
99
8C01|1|2
Enp1TAP_A population of yeast small ribosomal subunit precursorsELECTRON MICROSCOPY2.71545
100
8C00|1|2
Enp1TAP-S21_A population of yeast small ribosomal subunit precursors depleted of rpS21/eS21ELECTRON MICROSCOPY2.91425
101
6RBD|1|2
State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particlesELECTRON MICROSCOPY3.471777
102
6FAI|1|2
Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunitELECTRON MICROSCOPY3.41775
103
7WTR|1|C2
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-3ELECTRON MICROSCOPY3.51298
104
7WTM|1|C2
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-EELECTRON MICROSCOPY3.51106
105
7WTO|1|C2
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (without Rps2)ELECTRON MICROSCOPY3.51200
106
7WTN|1|C2
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Tsr1-1 (with Rps2)ELECTRON MICROSCOPY3.41200
107
7WTL|1|C2
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-DELECTRON MICROSCOPY3.31102
108
6ZQG|1|D3
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-CELECTRON MICROSCOPY3.51387
109
6KE6|1|SA+6KE6|1|5A+6KE6|1|3A
3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosomeELECTRON MICROSCOPY3.41310
110
6LQP|1|SA+6LQP|1|5A+6LQP|1|3A
Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)ELECTRON MICROSCOPY3.21325

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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