#IFECompound(s)RNA source organismTitleMethodResolutionDate
13UCZ|1|R (rep)RNA (92-MER), RNA (5'-R(*GP*G)-3')The c-di-GMP-I riboswitch bound to GpGX-RAY DIFFRACTION2.82012-01-04
23UD3|1|RRNA (92-MER), RNA (5'-R(P*GP*A)-3')The C92U mutant c-di-GMP-I riboswitch bound to pGpAX-RAY DIFFRACTION3.12012-01-04
33UCU|1|RRNA (92-MER), diguanosine monophosphateThe c-di-GMP-I riboswitch bound to pGpGX-RAY DIFFRACTION2.82012-01-04
43MXH|1|Rc-di-GMP riboswitchNative structure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.32010-08-25
53MUR|1|RC92U mutant c-di-GMP riboswitchCrystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION32010-08-25
63MUV|1|RG20A/C92U mutant c-di-GMP riboswitchCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMPX-RAY DIFFRACTION3.22010-08-25
74YB1|1|RRNA (91-MER)Vibrio cholerae20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMPX-RAY DIFFRACTION2.082015-04-15
83UD4|1|RRNA (92-MER), RNA (5'-R(*GP*A)-3')The C92U mutant c-di-GMP-I riboswitch bound to GpAX-RAY DIFFRACTION2.72012-01-04
93MUM|1|RG20A mutant c-di-GMP RiboswitchCrystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION2.92010-08-25
103IRW|1|Rc-di-GMP RiboswitchVibrio choleraeStructure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.72009-11-10
113MUT|1|RG20A/C92U mutant c-di-GMP riboswitchCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION32010-08-25

Release history

Release2.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.95
Date2016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_12260.3NR_3.5_12260.22.93(11) 3MUT|1|R, 3IRW|1|R, 3UD4|1|R, 3UCU|1|R, 3MUV|1|R, 3MUM|1|R, 4YB1|1|R, 3UCZ|1|R, 3MXH|1|R, 3MUR|1|R, 3UD3|1|R(0) (2) 3IWN|1|A, 3IWN|1|B

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13MUV|1|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMPX-RAY DIFFRACTION3.290
23IRW|1|RStructure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.790
33UD4|1|RThe C92U mutant c-di-GMP-I riboswitch bound to GpAX-RAY DIFFRACTION2.791
43UCU|1|RThe c-di-GMP-I riboswitch bound to pGpGX-RAY DIFFRACTION2.891
53UD3|1|RThe C92U mutant c-di-GMP-I riboswitch bound to pGpAX-RAY DIFFRACTION3.191
63UCZ|1|RThe c-di-GMP-I riboswitch bound to GpGX-RAY DIFFRACTION2.891
73MXH|1|RNative structure of a c-di-GMP riboswitch from V. choleraeX-RAY DIFFRACTION2.391
83MUM|1|RCrystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION2.991
93MUT|1|RCrystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION391
103MUR|1|RCrystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMPX-RAY DIFFRACTION391
114YB1|1|R20A Mutant c-di-GMP Vc2 Riboswitch bound with 3',3'-cGAMPX-RAY DIFFRACTION2.0891