#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17OHQ|1|6 (rep)ITS2Saccharomyces cerevisiae S288CNog1-TAP associated immature ribosomal particle population C from S. cerevisiaeElectron microscopy3.12021-11-03
26M62|1|6ITS2-1 miscRNASaccharomyces cerevisiaeCryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.Electron microscopy3.22020-08-26
36EM3|1|65.8S ribosomal RNASaccharomyces cerevisiaeState A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy3.22017-12-27
47BTB|1|6ITS2-1 miscRNASaccharomyces cerevisiaeCryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)Electron microscopy3.222020-10-28
57OHX|1|6ITS2Saccharomyces cerevisiae S288CNog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population AElectron microscopy3.32021-11-03
66ELZ|1|6Internal transcribed spacer 2Saccharomyces cerevisiaeState E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesElectron microscopy3.32017-12-27
73JCT|1|6ITS2-1 miscRNASaccharomyces cerevisiaeCryo-em structure of eukaryotic pre-60S ribosomal subunitsElectron microscopy3.082016-06-01
87OHW|1|6ITS2Saccharomyces cerevisiae S288CNog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population BElectron microscopy3.52021-11-03

Release history

Release3.2043.2053.2063.2073.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.277
Date2021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_18489.8NR_3.5_18489.73.204(8) 3JCT|1|6, 6ELZ|1|6, 6EM3|1|6, 6M62|1|6, 7BTB|1|6, 7OHQ|1|6, 7OHW|1|6, 7OHX|1|6(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_18489.8NR_3.5_18489.93.278(8) 3JCT|1|6, 6ELZ|1|6, 6EM3|1|6, 6M62|1|6, 7BTB|1|6, 7OHQ|1|6, 7OHW|1|6, 7OHX|1|6(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17OHX|1|6Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population AELECTRON MICROSCOPY3.365
26ELZ|1|6State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesELECTRON MICROSCOPY3.365
37OHW|1|6Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population BELECTRON MICROSCOPY3.565
47BTB|1|6Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)ELECTRON MICROSCOPY3.2265
53JCT|1|6Cryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.0865
66M62|1|6Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.ELECTRON MICROSCOPY3.265
77OHQ|1|6Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeELECTRON MICROSCOPY3.165
86EM3|1|6State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.265
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