BGSU RNA Site //

Equivalence class NR_3.5_19551.4 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
16GAZ|1|AA (rep)Small subunit ribosomal RNA12S ribosomal RNA, mitochondrialSus scrofaMitochondriaRF00177Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.Electron microscopy3.12018-08-08
26GAW|1|AASmall subunit ribosomal RNA12S ribosomal RNA, mitochondrialSus scrofaMitochondriaRF00177Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.Electron microscopy3.22018-08-22
37NQL|1|AASmall subunit ribosomal RNA12S rRNASus scrofaMitochondriaRF0017755S mammalian mitochondrial ribosome with ICT1 and P site tRNAMetElectron microscopy3.42021-05-05
47NQH|1|AASmall subunit ribosomal RNA12S rRNASus scrofaMitochondriaRF0017755S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMetElectron microscopy3.52021-05-05

Release history

Release3.1773.1783.1793.180
Date2021-05-052021-05-122021-05-192021-05-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_19551.4NR_3.5_19551.33.177(2) 6GAZ|1|AA, 6GAW|1|AA(2) 7NQL|1|AA, 7NQH|1|AA(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_19551.4NR_3.5_19551.53.181(4) 6GAW|1|AA, 6GAZ|1|AA, 7NQH|1|AA, 7NQL|1|AA(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16GAZ|1|AAUnique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.ELECTRON MICROSCOPY3.1960
26GAW|1|AAUnique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.ELECTRON MICROSCOPY3.2960
37NQL|1|AA55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMetELECTRON MICROSCOPY3.4960
47NQH|1|AA55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMetELECTRON MICROSCOPY3.5960