Equivalence class NR_3.5_20829.7 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 6BK8|1|2+ 6BK8|1|6+ 6BK8|1|i (rep) | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, RNA (59-MER) | Saccharomyces cerevisiae | Eukarya | RF00004 + RF00026 | S. cerevisiae spliceosomal post-catalytic P complex | Electron microscopy | 3.3 | 2018-02-21 |
2 | 6J6G|1|L+ 6J6G|1|E | U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | U2 snRNA, U6 snRNA, ACT1 pre-mRNA | Saccharomyces cerevisiae | Eukarya | RF00004 + RF00026 | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | Electron microscopy | 3.2 | 2019-04-24 |
3 | 5ZWM|1|H+ 5ZWM|1|I+ 5ZWM|1|F | U2 splicesomal small nuclear RNA + U4 spliceosomal RNA + U6 spliceosomal RNA | U2 snRNA, U4 snRNA, U6 snRNA, Pre-mRNA-BPS | Saccharomyces cerevisiae | Eukarya | RF00004 + RF00015 + RF00026 | Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part) | Electron microscopy | 3.4 | 2018-08-29 |
Release history
Release | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_3.5_20829.7 | NR_3.5_20829.6 | 3.71 | (2) 6BK8|1|2+6BK8|1|6+6BK8|1|i, 5ZWM|1|H+5ZWM|1|I+5ZWM|1|F | (1) 6J6G|1|L+6J6G|1|E | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_3.5_20829.7 | NR_3.5_01315.1 | 3.99 | (1) 6J6G|1|L+6J6G|1|E | (2) 6BK8|1|2+6BK8|1|6+6BK8|1|i, 5ZWM|1|H+5ZWM|1|I+5ZWM|1|F | (0) |
NR_3.5_20829.7 | NR_3.5_10510.1 | 3.99 | (1) 6BK8|1|2+6BK8|1|6+6BK8|1|i | (2) 6J6G|1|L+6J6G|1|E, 5ZWM|1|H+5ZWM|1|I+5ZWM|1|F | (0) |
NR_3.5_20829.7 | NR_3.5_36828.1 | 3.99 | (1) 5ZWM|1|H+5ZWM|1|I+5ZWM|1|F | (2) 6BK8|1|2+6BK8|1|6+6BK8|1|i, 6J6G|1|L+6J6G|1|E | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 5ZWM|1|H+5ZWM|1|I+5ZWM|1|F | Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.4~4.6 angstrom (tri-snRNP and U2 snRNP Part) | ELECTRON MICROSCOPY | 3.4 | 206 |
2 | 6J6G|1|L+6J6G|1|E | Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom | ELECTRON MICROSCOPY | 3.2 | 208 |
3 | 6BK8|1|2+6BK8|1|6+6BK8|1|i | S. cerevisiae spliceosomal post-catalytic P complex | ELECTRON MICROSCOPY | 3.3 | 135 |