Equivalence class NR_3.5_30457.9 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GMK|1|D (rep) | U5 spliceosomal RNA | 5'-Exon, U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | Electron microscopy | 3.4 | 2016-08-17 |
| 2 | 6BK8|1|5 | U5 spliceosomal RNA | RNA (34-MER), U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | S. cerevisiae spliceosomal post-catalytic P complex | Electron microscopy | 3.3 | 2018-02-21 |
| 3 | 5Y88|1|B | U5 spliceosomal RNA | U5 snRNA | Saccharomyces cerevisiae | Eukarya | RF00020 | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | Electron microscopy | 3.46 | 2018-08-01 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_30457.9 | NR_3.5_30457.8 | 3.33 | (2) 5GMK|1|D, 6BK8|1|5 | (1) 5Y88|1|B | (0) |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well.
| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5Y88|1|B | Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom | ELECTRON MICROSCOPY | 3.46 | 117 |
| 2 | 5GMK|1|D | Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution | ELECTRON MICROSCOPY | 3.4 | 117 |
| 3 | 6BK8|1|5 | S. cerevisiae spliceosomal post-catalytic P complex | ELECTRON MICROSCOPY | 3.3 | 103 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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