Equivalence class NR_3.5_33014.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6LQP|1|SA+ 6LQP|1|5A+ 6LQP|1|3A (rep) | Small subunit ribosomal RNA + U3 small nucleolar RNA | 18S pre-rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | Eukarya | RF01960 + RF01846 | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A) | Electron microscopy | 3.2 | 2020-09-16 |
| 2 | 6KE6|1|SA+ 6KE6|1|5A+ 6KE6|1|3A | Small subunit ribosomal RNA + U3 small nucleolar RNA | 18S rRNA, 5' ETS, U3 snoRNA | Saccharomyces cerevisiae | Eukarya | RF01960 + RF01846 | 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome | Electron microscopy | 3.4 | 2020-08-05 |
| 3 | 6ZQG|1|D3 | Small subunit ribosomal RNA | 18S rRNA, U3 snoRNA | Saccharomyces cerevisiae | Eukarya | RF01960 | Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C | Electron microscopy | 3.5 | 2020-09-23 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_33014.2 | NR_3.5_33014.1 | 3.145 | (2) 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A, 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A | (1) 6ZQG|1|D3 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_3.5_33014.2 | NR_3.5_33014.3 | 3.159 | (3) 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A, 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A, 6ZQG|1|D3 | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6LQP|1|SA+6LQP|1|5A+6LQP|1|3A | Cryo-EM structure of 90S small subunit preribosomes in transition states (State A) | ELECTRON MICROSCOPY | 3.2 | 1325 |
| 2 | 6KE6|1|SA+6KE6|1|5A+6KE6|1|3A | 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome | ELECTRON MICROSCOPY | 3.4 | 1310 |
| 3 | 6ZQG|1|D3 | Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Dis-C | ELECTRON MICROSCOPY | 3.5 | 1387 |